-
1
-
-
34250765585
-
-
eds Foss SE, Prothero DR Johns Hopkins University Press, Baltimore, MD, pp
-
Foss SE, Prothero DR (2007) Introduction to The Evolution of Artiodactyls, eds Foss SE, Prothero DR (Johns Hopkins University Press, Baltimore, MD), pp 1-3.
-
(2007)
Introduction to The Evolution of Artiodactyls
, pp. 1-3
-
-
Foss, S.E.1
Prothero, D.R.2
-
2
-
-
0026521633
-
Phylogeny of the Bovidae (Artiodactyla, Mammalia), based on mitochondrial ribosomal DNA sequences
-
Gatesy J, Yelon D, DeSalle R, Vrba ES (1992) Phylogeny of the Bovidae (Artiodactyla, Mammalia), based on mitochondrial ribosomal DNA sequences. Mol Biol Evol 9:433-446.
-
(1992)
Mol Biol Evol
, vol.9
, pp. 433-446
-
-
Gatesy, J.1
Yelon, D.2
DeSalle, R.3
Vrba, E.S.4
-
3
-
-
67349239414
-
Molecular phylogeny of terrestrial artiodactyls: Conflicts and resolution
-
eds Foss SE, Prothero DR Johns Hopkins University Press, Baltimore, MD, pp
-
Marcot JD (2007) Molecular phylogeny of terrestrial artiodactyls: Conflicts and resolution, in The Evolution of Artiodactyls, eds Foss SE, Prothero DR (Johns Hopkins University Press, Baltimore, MD), pp 4-18.
-
(2007)
The Evolution of Artiodactyls
, pp. 4-18
-
-
Marcot, J.D.1
-
4
-
-
33744462059
-
The origin of European cattle: Evidence from modern and ancient DNA
-
Beja-Pereira A, et al. (2006) The origin of European cattle: Evidence from modern and ancient DNA. Proc Natl Acad Sci USA 103:8113-8118.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 8113-8118
-
-
Beja-Pereira, A.1
-
6
-
-
27644482237
-
Cattle domestication in the Near East was followed by hybridization with aurochs bulls in Europe
-
Gotherstrom A, et al. (2005) Cattle domestication in the Near East was followed by hybridization with aurochs bulls in Europe. Proc Biol Sci 272:2345-2350.
-
(2005)
Proc Biol Sci
, vol.272
, pp. 2345-2350
-
-
Gotherstrom, A.1
-
7
-
-
0028213903
-
Evidence for two independent domestications of cattle
-
Loftus RT, MacHugh DE, Bradley DG, Sharp PM, Cunningham P (1994) Evidence for two independent domestications of cattle. Proc Natl Acad Sci USA 91:2757-2761.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 2757-2761
-
-
Loftus, R.T.1
MacHugh, D.E.2
Bradley, D.G.3
Sharp, P.M.4
Cunningham, P.5
-
8
-
-
3042646588
-
Independent mitochondrial origin and historical genetic differentiation in North Eastern Asian cattle
-
Mannen H, et al. (2004) Independent mitochondrial origin and historical genetic differentiation in North Eastern Asian cattle. Mol Phylogenet Evol 32:539-544.
-
(2004)
Mol Phylogenet Evol
, vol.32
, pp. 539-544
-
-
Mannen, H.1
-
9
-
-
39749181521
-
Worldwide human relationships inferred from genome-wide patterns of variation
-
Li JZ, et al. (2008) Worldwide human relationships inferred from genome-wide patterns of variation. Science 319:1100-1104.
-
(2008)
Science
, vol.319
, pp. 1100-1104
-
-
Li, J.Z.1
-
10
-
-
39749197456
-
Genotype, haplotype and copy-number variation in worldwide human populations
-
Jakobsson M, et al. (2008) Genotype, haplotype and copy-number variation in worldwide human populations. Nature 451:998-1003.
-
(2008)
Nature
, vol.451
, pp. 998-1003
-
-
Jakobsson, M.1
-
11
-
-
40149098690
-
SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries
-
Van Tassell CP, et al. (2008) SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries. Nat Methods 5:247-252.
-
(2008)
Nat Methods
, vol.5
, pp. 247-252
-
-
Van Tassell, C.P.1
-
12
-
-
67651107321
-
Development and characterization of a high density SNP genotyping assay for cattle
-
Matukumalli LK, et al. (2009) Development and characterization of a high density SNP genotyping assay for cattle. PloS ONE 4:e5350.
-
(2009)
PloS ONE
, vol.4
-
-
Matukumalli, L.K.1
-
13
-
-
31344476038
-
Whole-genome genotyping with the single-base extension assay
-
Steemers FJ, et al. (2006) Whole-genome genotyping with the single-base extension assay. Nat Methods 3:31-33.
-
(2006)
Nat Methods
, vol.3
, pp. 31-33
-
-
Steemers, F.J.1
-
14
-
-
18344380664
-
Selection and use of SNP markers for animal identification and paternity analysis in U.S. beef cattle
-
Heaton MP, et al. (2002) Selection and use of SNP markers for animal identification and paternity analysis in U.S. beef cattle. Mamm Genome 13:272-281.
-
(2002)
Mamm Genome
, vol.13
, pp. 272-281
-
-
Heaton, M.P.1
-
15
-
-
0037955994
-
Molecular and morphological phylogenies of Ruminantia and the alternative position of the Moschidae
-
Hassanin A, Douzery EJ (2003) Molecular and morphological phylogenies of Ruminantia and the alternative position of the Moschidae. Syst Biol 52:206-228.
-
(2003)
Syst Biol
, vol.52
, pp. 206-228
-
-
Hassanin, A.1
Douzery, E.J.2
-
16
-
-
18344396798
-
Comprehensive human genome amplification using multiple displacement amplification
-
Dean FB, et al. (2002) Comprehensive human genome amplification using multiple displacement amplification. Proc Natl Acad Sci USA 99:5261-5266.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 5261-5266
-
-
Dean, F.B.1
-
17
-
-
34447521496
-
Evaluation of whole genome amplification methods using postmortem brain samples
-
Iwamoto K, et al. (2007) Evaluation of whole genome amplification methods using postmortem brain samples. J Neurosci Methods 165:104-110.
-
(2007)
J Neurosci Methods
, vol.165
, pp. 104-110
-
-
Iwamoto, K.1
-
18
-
-
9444220256
-
Rise and fall of the Beringian steppe bison
-
Shapiro B, et al. (2004) Rise and fall of the Beringian steppe bison. Science 306:1561-1565.
-
(2004)
Science
, vol.306
, pp. 1561-1565
-
-
Shapiro, B.1
-
19
-
-
0021038163
-
Estimation of the coancestry coefficient: Basis for a short-term genetic distance
-
Reynolds J, Weir BS, Cockerham CC (1983) Estimation of the coancestry coefficient: Basis for a short-term genetic distance. Genetics 105:767-779.
-
(1983)
Genetics
, vol.105
, pp. 767-779
-
-
Reynolds, J.1
Weir, B.S.2
Cockerham, C.C.3
-
20
-
-
17744398025
-
More genes or more taxa? The relative contribution of gene number and taxon number to phylogenetic accuracy
-
Rokas A, Carroll SB (2005) More genes or more taxa? The relative contribution of gene number and taxon number to phylogenetic accuracy. Mol Biol Evol 22:1337-1344.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1337-1344
-
-
Rokas, A.1
Carroll, S.B.2
-
21
-
-
0032225748
-
Does adding characters with missing data increase or decrease phylogenetic accuracy?
-
Wiens JJ (1998) Does adding characters with missing data increase or decrease phylogenetic accuracy? Syst Biol 47:625-640.
-
(1998)
Syst Biol
, vol.47
, pp. 625-640
-
-
Wiens, J.J.1
-
22
-
-
0042905752
-
Missing data, incomplete taxa, and phylogenetic accuracy
-
Wiens JJ (2003) Missing data, incomplete taxa, and phylogenetic accuracy. Syst Biol 52:528-538.
-
(2003)
Syst Biol
, vol.52
, pp. 528-538
-
-
Wiens, J.J.1
-
23
-
-
47749095118
-
Taxon sampling affects inferences of macroevolutionary processes from phylogenetic trees
-
Heath TA, Zwickl DJ, Kim J, Hillis DM (2008) Taxon sampling affects inferences of macroevolutionary processes from phylogenetic trees. Syst Biol 57:160-166.
-
(2008)
Syst Biol
, vol.57
, pp. 160-166
-
-
Heath, T.A.1
Zwickl, D.J.2
Kim, J.3
Hillis, D.M.4
-
24
-
-
0022203256
-
Phylogenies and the comparative method
-
Felsenstein J (1985) Phylogenies and the comparative method. Am Nat 125:1-15.
-
(1985)
Am Nat
, vol.125
, pp. 1-15
-
-
Felsenstein, J.1
-
25
-
-
0029472631
-
Uses of molecular phylogenies for conservation
-
Moritz C (1995) Uses of molecular phylogenies for conservation. Phil Trans R Soc Lond 349:113-118.
-
(1995)
Phil Trans R Soc Lond
, vol.349
, pp. 113-118
-
-
Moritz, C.1
-
26
-
-
0030822807
-
Microsatellite DNA variation and the evolution, domestication and phylogeography of taurine and zebu cattle (Bos taurus and Bos indicus)
-
MacHugh DE, Shriver MD, Loftus RT, Cunningham P, Bradley DG (1997) Microsatellite DNA variation and the evolution, domestication and phylogeography of taurine and zebu cattle (Bos taurus and Bos indicus). Genetics 146:1071-1086.
-
(1997)
Genetics
, vol.146
, pp. 1071-1086
-
-
MacHugh, D.E.1
Shriver, M.D.2
Loftus, R.T.3
Cunningham, P.4
Bradley, D.G.5
-
27
-
-
34447337792
-
The mystery of Etruscan origins: Novel clues from Bos taurus mitochondrial DNA
-
Pellecchia M, et al. (2007) The mystery of Etruscan origins: Novel clues from Bos taurus mitochondrial DNA. Proc Biol Sci 274:1175-1179.
-
(2007)
Proc Biol Sci
, vol.274
, pp. 1175-1179
-
-
Pellecchia, M.1
-
28
-
-
73249141735
-
-
Porter V (1991) Cattle: A Handbook to the Breeds of the World (Christopher Helm Publishers Ltd, London, UK).
-
Porter V (1991) Cattle: A Handbook to the Breeds of the World (Christopher Helm Publishers Ltd, London, UK).
-
-
-
-
29
-
-
45749124657
-
TNT, a free program for phylogenetic analysis
-
Goloboff PA, Farris JS, Nixon KC (2008) TNT, a free program for phylogenetic analysis. Cladistics 24:774-786.
-
(2008)
Cladistics
, vol.24
, pp. 774-786
-
-
Goloboff, P.A.1
Farris, J.S.2
Nixon, K.C.3
-
30
-
-
33644974019
-
A fast and flexible statistical model for large-scale population genotype data: Applications to inferring missing genotypes and haplotypic phase
-
Scheet P, Stephens M (2006) A fast and flexible statistical model for large-scale population genotype data: Applications to inferring missing genotypes and haplotypic phase. Am J Hum Genet 78:629-644.
-
(2006)
Am J Hum Genet
, vol.78
, pp. 629-644
-
-
Scheet, P.1
Stephens, M.2
-
31
-
-
65449132092
-
Genomewide survey of SNP variation uncovers the genetic structure of cattle breeds
-
The Bovine HapMap Consortium
-
The Bovine HapMap Consortium (2009) Genomewide survey of SNP variation uncovers the genetic structure of cattle breeds. Science 324:528-532.
-
(2009)
Science
, vol.324
, pp. 528-532
-
-
-
32
-
-
73249151792
-
-
Felsenstein J (1989) PHYLIP-phylogeny inference package version 3.2, Cladistics 5:164-166
-
Felsenstein J (1989) PHYLIP-phylogeny inference package (version 3.2). Cladistics 5:164-166.
-
-
-
-
33
-
-
73249132956
-
-
Zuccon A, Zuccon D (2008) MrEnt v. 3. Program distributed by the authors. Available at http://www.mrent.org/frame1.htm.
-
Zuccon A, Zuccon D (2008) MrEnt v. 3. Program distributed by the authors. Available at http://www.mrent.org/frame1.htm.
-
-
-
-
34
-
-
30744470609
-
Application of phylogenetic networks in evolutionary studies
-
Huson DH, Bryant D (2006) Application of phylogenetic networks in evolutionary studies. Mol Biol Evol 23:254-267.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 254-267
-
-
Huson, D.H.1
Bryant, D.2
|