Microbial production host selection for converting second-generation feedstocks into bioproducts

Microbial Cell Factories

Volumn 8, Issue , 2009, Pages

  Rumbold, Karl ^a,b   van Buijsen, Hugo J J ^a   Overkamp, Karin M ^a   van Groenestijn, Johan W ^a   Punt, Peter J ^a   Werf, Mariët J V D ^a  

^a TNO   (Netherlands)

^b UNIVERSITY OF THE WITWATERSRAND   (South Africa)

Author keywords

[No Author keywords available]

Indexed keywords

2 OXOGLUTARIC ACID; ACETIC ACID; ARABINITOL; BIODIESEL; FORMIC ACID; GLUCONIC ACID; GLYCEROL; ISOBUTYRIC ACID; ISOCITRIC ACID; ISOVALERIC ACID; LACTIC ACID; LIGNOCELLULOSE; MALIC ACID; MANNITOL; MONOSACCHARIDE; OROTIC ACID; OXALIC ACID; PROPIONIC ACID; PYRUVIC ACID; SUCCINIC ACID; SULFURIC ACID; XYLOSE; LIGNIN;

ARTICLE; ASPERGILLUS NIGER; BIOMASS PRODUCTION; BIOTECHNOLOGY; CARBON SOURCE; CONTROLLED STUDY; CORN; CORYNEBACTERIUM GLUTAMICUM; ESCHERICHIA COLI; FERMENTATION; GLUCOSE UTILIZATION; HOST SELECTION; HYDROLYSIS; HYPOCREA JECORINA; MICROBIAL GROWTH; NONHUMAN; PICHIA STIPITIS; SUGARCANE; WHEAT; WILLOW; BIOMASS; CHEMISTRY; GROWTH, DEVELOPMENT AND AGING; PICHIA; SACCHAROMYCES CEREVISIAE; TRICHODERMA;

ASPERGILLUS NIGER; BACTERIA (MICROORGANISMS); CORYNEBACTERIUM GLUTAMICUM; ESCHERICHIA COLI; FUNGI; HYPOCREA JECORINA; PICHIA STIPITIS; SACCHAROMYCES CEREVISIAE; SACCHARUM; SALIX; TRITICUM AESTIVUM; ZEA MAYS;

ASPERGILLUS NIGER; BIOMASS; CORYNEBACTERIUM GLUTAMICUM; ESCHERICHIA COLI; FERMENTATION; LIGNIN; PICHIA; SACCHAROMYCES CEREVISIAE; TRICHODERMA;

EID: 73149086619     PISSN: None     EISSN: 14752859     Source Type: Journal    
DOI: 10.1186/1475-2859-8-64     Document Type: Article

References (22)

1. Caesar B. Industrial biotechnology: More than just ethanol - Factors driving industry growth. Ind Biotechnol 2008, 4:50-54.
2. Demain AL. The business of biotechnology. Ind Biotechnol 2007, 3:269-283.
3. Lynd LR, Wyman CE, Gerngross TU. Biocommodity Engineering. Biotechnol Prog 1999, 15:777-793. 10.1021/bp990109e, 10514248.
4. Palmqvist E, Hahn-Hägerdal B. Fermentation of lignocellulosic hydrolysates. I: Inhibition and detoxification. Biores Technol 2000, 74:17-24.
5. Kuyper M, Harhangi HR, Stave AK, Winkler AA, Jetten MS, de Laat WT, den Ridder JJ, Op den Camp HJ, Van Dijken JP, Pronk JT. High-level functional expression of a fungal xylose isomerase: the key to efficient ethanolic fermentation of xylose by Saccharomyces cerevisiae?. FEMS Yeast Res 2003, 4:69-78. 10.1016/S1567-1356(03)00141-7, 14554198.
6. Wisselink HW, Toirkens MJ, Del Rosario Franco Berriel M, Winkler AA, Van Dijken JP, Pronk JT, Van Maris AJA. Engineering of Saccharomyces cerevisiae for efficient anaerobic alcoholic fermentation of L-arabinose. Appl Environ Microbiol 2007, 73:4881-4891. 10.1128/AEM.00177-07, 1951023, 17545317.
7. Almeida JR, Modig T, Röder A, Lidén G, Gorwa-Grauslund MF. Pichia stipitis xylose reductase helps detoxifying lignocellulosic hydrolysate by reducing 5-hydroxymethyl-furfural (HMF). Biotechnol Biofuels 2008, 11:1-12.
8. Heer D, Sauer U. Identification of furfural as a key toxin in lignocellulosic hydrolysates and evolution of a tolerant yeast strain. Microb Biotechnol 2008, 1:497-506.
9. Reith JH, Den Uil H, Van Veen H, De Laat WTAM, Niessen JJ, De Jong E, Elbersen HW, Weusthuis R, Van Dijken JP, Raamsdonk L. Co-production of bio-ethanol, electricity and heat from biomass residues. Proceedings 12th European Conference and Technology Exhibition on Biomass for Energy, Industry and Climate Protection, Amsterdam, The Netherlands, 17-21 June, 2002
10. Bakker RR, Gosselink RJA, Maas RHW, De Vrije T, De Jong E, Van Groenestijn JW, Hazewinkel JHO. Biofuel production from acid-impregnated willow and switchgrass. Proceedings 2nd World Conference on Biomass for Energy, Industry and Climate Protection. 10-5-2008. Rome, Italy
11. Van Groenestijn J, Hazewinkel O, Bakker R. Pretreatment of lignocellulose with biological acid recycling (Biosulfurol process). Sugar Industry 2006, 131:639-641.
12. Ito T, Nakashimada Y, Senba K, Matsui T, Nishio N. Hydrogen and ethanol production from glycerol-containing wastes discharged after biodiesel manufacturing process. J Biosci Bioeng 2005, 100:260-265. 10.1263/jbb.100.260, 16243274.
13. Kádár Z, Maltha S, Szengyel Z, Réczey K, De Laat W. Ethanol fermentation of various pretreated and hydrolyzed substrates at low initial pH. Appl Biochem Biotechnol 2007, 137:847-858. 10.1007/s12010-007-9102-y, 18478439.
14. Coulier L, Bas R, Jespersen S, Verheij E, Werf MJ, Hankemeier T. Simultaneous quantitative analysis of metabolites using ion-pair liquid chromatography-electrospray ionization mass spectrometry. Anal Chem 2006, 78:6573-6582. 10.1021/ac0607616, 16970336.
15. Koek MM, Muilwijk B, Werf MJ, Hankemeier T. Microbial metabolomics with gas chromatography/mass spectrometry. Anal Chem 2006, 78:1272-1281. 10.1021/ac051683+, 16478122.
16. Werf MJ, Overkamp KM, Muilwijk B, Coulier L, Hankemeier T. Microbial metabolomics: Toward a platform with full metabolome coverage. Anal Biochem 2007, 370:17-25. 10.1016/j.ab.2007.07.022, 17765195.
17. Tempest DW, Neijssel OM. Overflow metabolism in aerobic micro-organisms. Biochem Soc Trans 1979, 7:82-85.
18. Zaldivar J, Nielsen J, Olsson L. Fuel ethanol production from lignocellulose: A challenge for metabolic engineering and process integration. Appl Microbiol Biotechnol 2001, 56:17-34. 10.1007/s002530100624, 11499926.
19. Wyman CE. Ethanol from lignocellulosic biomass: Technology, economics, and opportunities. Biores Technol 1994, 50:3-15.
20. Luttik MAH, Overkamp KM, Kötter P, De Vries S, Van Dijken JP, Pronk JT. The Saccharomyces cerevisiae NDE1 and NDE2 genes encode separate mitochondrial NADH dehydrogenases catalyzing the oxidation of cytosolic NADH. J Biol Chem 1998, 273:24529-24534. 10.1074/jbc.273.38.24529, 9733747.
21. Pecina R, Born G, Burtscher E, Bobleter O. High-performance liquid chromatrography elution behaviour of alcohols, aldehydes, ketones, organic acids and carbohydrates on a strong cation-exchange stationary phase. J Chromatogr A 1984, 287:145-258.
22. Patrick DW, Kracht WR. Single-valve, single-pump, high-performance liquid chromatography column-switching analysis of hydrolyzed wood components. J Chromatogr A 1985, 318:269-278.