메뉴 건너뛰기




Volumn 44, Issue 2, 2010, Pages 138-146

Season and management related changes in the diversity of nitrifying and denitrifying bacteria over winter and spring

Author keywords

Denitrification; Microbial diversity; Nitrification; Nitrous oxide

Indexed keywords

BACTERIA (MICROORGANISMS);

EID: 73149085054     PISSN: 09291393     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.apsoil.2009.11.004     Document Type: Article
Times cited : (94)

References (52)
  • 1
    • 0021368478 scopus 로고
    • Gaseous nitrogen losses from soils under zero-till as compared with conventional-till management systems
    • Aulakh M.S., Rennie D.A., and Paul E.A. Gaseous nitrogen losses from soils under zero-till as compared with conventional-till management systems. J. Environ. Qual. 13 (1984) 130-136
    • (1984) J. Environ. Qual. , vol.13 , pp. 130-136
    • Aulakh, M.S.1    Rennie, D.A.2    Paul, E.A.3
  • 2
    • 33847216554 scopus 로고    scopus 로고
    • Response of Nitrosospira sp. Strain AF-like ammonia oxidizers to changes in temperature, soil moisture content, and fertilizer concentration
    • Avrahami S., and Bohannan B.J.M. Response of Nitrosospira sp. Strain AF-like ammonia oxidizers to changes in temperature, soil moisture content, and fertilizer concentration. Appl. Environ. Microbiol. 73 (2007) 1166-1173
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 1166-1173
    • Avrahami, S.1    Bohannan, B.J.M.2
  • 3
    • 29144510139 scopus 로고    scopus 로고
    • Cold-temperate climate: a factor for selection of ammonia oxidizers in upland soil?
    • Avrahami S., and Conrad R. Cold-temperate climate: a factor for selection of ammonia oxidizers in upland soil?. Can. J. Microbiol. 51 (2005) 709-714
    • (2005) Can. J. Microbiol. , vol.51 , pp. 709-714
    • Avrahami, S.1    Conrad, R.2
  • 4
    • 0042197522 scopus 로고    scopus 로고
    • Effects of temperature and fertilizer on activity and community structure of soil ammonia oxidizers
    • Avrahami S., Liesack W., and Conrad R. Effects of temperature and fertilizer on activity and community structure of soil ammonia oxidizers. Environ. Microbiol. 5 (2003) 691-705
    • (2003) Environ. Microbiol. , vol.5 , pp. 691-705
    • Avrahami, S.1    Liesack, W.2    Conrad, R.3
  • 5
    • 0032728131 scopus 로고    scopus 로고
    • 4 fluxes in relation to tillage, compaction and soil quality in Scotland
    • 4 fluxes in relation to tillage, compaction and soil quality in Scotland. Soil Tillage Res. 53 (1999) 29-39
    • (1999) Soil Tillage Res. , vol.53 , pp. 29-39
    • Ball, B.1    Scott, A.2    Parker, J.3
  • 7
    • 0031864898 scopus 로고    scopus 로고
    • Determinants of soil microbial communities: effects of agricultural management, season, and soil type on phospholipid acid profiles
    • Bossio D., Scow K., Gunapala N., and Graham K. Determinants of soil microbial communities: effects of agricultural management, season, and soil type on phospholipid acid profiles. Microb. Ecol. 36 (1998) 1-12
    • (1998) Microb. Ecol. , vol.36 , pp. 1-12
    • Bossio, D.1    Scow, K.2    Gunapala, N.3    Graham, K.4
  • 8
    • 35948950775 scopus 로고    scopus 로고
    • Impact of plant functional group, plant species, and sampling time on the composition of nirK-type denitrifier communities in soil
    • Bremer C., Braker G., Matthies D., Reuter A., Engels C., and Conrad R. Impact of plant functional group, plant species, and sampling time on the composition of nirK-type denitrifier communities in soil. Appl. Environ. Microbiol. 73 (2007) 6876-6884
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 6876-6884
    • Bremer, C.1    Braker, G.2    Matthies, D.3    Reuter, A.4    Engels, C.5    Conrad, R.6
  • 9
    • 0019202077 scopus 로고
    • Seasonal variability in emission of nitrous oxide from soil
    • Bremner J.M., Robbins S.G., and Blackmer A.M. Seasonal variability in emission of nitrous oxide from soil. Geophys. Res. Lett. 7 (1980) 641-644
    • (1980) Geophys. Res. Lett. , vol.7 , pp. 641-644
    • Bremner, J.M.1    Robbins, S.G.2    Blackmer, A.M.3
  • 10
    • 0000040529 scopus 로고
    • Influence of fluctuating temperatures and constant soil moistures on nitrogen changes in amended and unamended loam
    • Campbell C.A., and Biederbeck V.O. Influence of fluctuating temperatures and constant soil moistures on nitrogen changes in amended and unamended loam. Can. J. Soil Sci. 52 (1972) 323-336
    • (1972) Can. J. Soil Sci. , vol.52 , pp. 323-336
    • Campbell, C.A.1    Biederbeck, V.O.2
  • 12
    • 3843094830 scopus 로고    scopus 로고
    • Diversity and composition of tropical soil nitrifiers across a plant diversity gradient and among land-use types
    • Carney K.M., Matson P.A., and Bohannan B.J. Diversity and composition of tropical soil nitrifiers across a plant diversity gradient and among land-use types. Ecol. Lett. 7 (2004) 684-694
    • (2004) Ecol. Lett. , vol.7 , pp. 684-694
    • Carney, K.M.1    Matson, P.A.2    Bohannan, B.J.3
  • 13
    • 0033939308 scopus 로고    scopus 로고
    • The functional significance of denitrifier community composition in a terrestrial ecosystem
    • Cavigelli M., and Robertson G. The functional significance of denitrifier community composition in a terrestrial ecosystem. Ecology 81 (2000) 1402-1414
    • (2000) Ecology , vol.81 , pp. 1402-1414
    • Cavigelli, M.1    Robertson, G.2
  • 14
    • 0035117250 scopus 로고    scopus 로고
    • Role of denitrifier diversity in rates of nitrous oxide consumption in a terrestrial ecosystem
    • Cavigelli M., and Robertson G. Role of denitrifier diversity in rates of nitrous oxide consumption in a terrestrial ecosystem. Soil Biol. Biochem. 33 (2001) 297-310
    • (2001) Soil Biol. Biochem. , vol.33 , pp. 297-310
    • Cavigelli, M.1    Robertson, G.2
  • 15
    • 0026292595 scopus 로고
    • Organic matter available for denitrification in different soil fractions: effects of freeze-thaw cycles and straw disposal
    • Christensen S., and Christensen B.T. Organic matter available for denitrification in different soil fractions: effects of freeze-thaw cycles and straw disposal. J. Soil Sci. 41 (1991) 637-647
    • (1991) J. Soil Sci. , vol.41 , pp. 637-647
    • Christensen, S.1    Christensen, B.T.2
  • 18
    • 0036795680 scopus 로고    scopus 로고
    • Winter soil temperature (2-15 °C) effects on nitrogen transformations in clover green manure amended or unamended soils: a laboratory and field study
    • Cookson W.R., Cornforth I.S., and Rowarth J.S. Winter soil temperature (2-15 °C) effects on nitrogen transformations in clover green manure amended or unamended soils: a laboratory and field study. Soil Biol. Biochem. 34 (2002) 1401-1415
    • (2002) Soil Biol. Biochem. , vol.34 , pp. 1401-1415
    • Cookson, W.R.1    Cornforth, I.S.2    Rowarth, J.S.3
  • 19
    • 33750919098 scopus 로고    scopus 로고
    • Cultivation-independent analysis of Pseudomonas species in soil and in the rhizosphere of field-grown Verticillium dahliae host plants
    • Costa R., Salles J.F., Berg G., and Smalla K. Cultivation-independent analysis of Pseudomonas species in soil and in the rhizosphere of field-grown Verticillium dahliae host plants. Environ. Microbiol. 8 (2006) 2136-2149
    • (2006) Environ. Microbiol. , vol.8 , pp. 2136-2149
    • Costa, R.1    Salles, J.F.2    Berg, G.3    Smalla, K.4
  • 20
    • 13844257500 scopus 로고    scopus 로고
    • Soil water content and organic carbon availability are major determinants of soil microbial community composition
    • Drenovsky R.E., Vo D., Graham K.J., and Scow K.M. Soil water content and organic carbon availability are major determinants of soil microbial community composition. FEMS Microbiol. Ecol. 48 (2004) 424-430
    • (2004) FEMS Microbiol. Ecol. , vol.48 , pp. 424-430
    • Drenovsky, R.E.1    Vo, D.2    Graham, K.J.3    Scow, K.M.4
  • 23
    • 0025596536 scopus 로고
    • Temperature-dependent nitrogen transformations in acid oak-beech forest litter in the Netherlands
    • Emmer I.M., and Tietema A. Temperature-dependent nitrogen transformations in acid oak-beech forest litter in the Netherlands. Plant Soil 122 (1990) 193-196
    • (1990) Plant Soil , vol.122 , pp. 193-196
    • Emmer, I.M.1    Tietema, A.2
  • 27
    • 0003459120 scopus 로고    scopus 로고
    • Watson R. (Ed), Cambridge University Press 184 pp
    • IPCC. In: Watson R. (Ed). Climate Change 2001: Synthesis Report (2001), Cambridge University Press 184 pp
    • (2001) Climate Change 2001: Synthesis Report
    • IPCC1
  • 30
    • 0034945992 scopus 로고    scopus 로고
    • Tillage systems and soil ecology
    • Kladivko E. Tillage systems and soil ecology. Soil Tillage Res. 61 (2001) 61-70
    • (2001) Soil Tillage Res. , vol.61 , pp. 61-70
    • Kladivko, E.1
  • 33
    • 0035060552 scopus 로고    scopus 로고
    • 2-fixing bacteria in an acid soil of a Norway spruce forest
    • 2-fixing bacteria in an acid soil of a Norway spruce forest. Plant Soil. 230 (2001) 145-160
    • (2001) Plant Soil. , vol.230 , pp. 145-160
    • Mergel, A.1    Kloos, K.2    Bothe, H.3
  • 34
    • 0006007453 scopus 로고
    • Organism specific denitrification in samples of Udifluvent with different nitrate concentrations
    • Munch J. Organism specific denitrification in samples of Udifluvent with different nitrate concentrations. S. Pflanzenernahr. Bodenk 152 (1989) 395-400
    • (1989) S. Pflanzenernahr. Bodenk , vol.152 , pp. 395-400
    • Munch, J.1
  • 35
    • 0027460328 scopus 로고
    • Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
    • Muyzer G., de Waal E.C., and Uitterlinden A.G. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59 (1993) 695-700
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 695-700
    • Muyzer, G.1    de Waal, E.C.2    Uitterlinden, A.G.3
  • 36
    • 0030814870 scopus 로고    scopus 로고
    • The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia oxidizing populations
    • Rotthauwe J.H., Witzel K.P., and Liesak W. The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia oxidizing populations. Appl. Environ. Microbiol. 63 (1997) 4704-4712
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 4704-4712
    • Rotthauwe, J.H.1    Witzel, K.P.2    Liesak, W.3
  • 39
    • 0035658341 scopus 로고    scopus 로고
    • Seasonal, soil type, and alternative management influences on microbial communities of vegetable cropping systems
    • Schutter M.E., Sandeno J.M., and Dick R.P. Seasonal, soil type, and alternative management influences on microbial communities of vegetable cropping systems. Biol. Fertility Soils 34 (2001) 397-410
    • (2001) Biol. Fertility Soils , vol.34 , pp. 397-410
    • Schutter, M.E.1    Sandeno, J.M.2    Dick, R.P.3
  • 41
    • 0035344248 scopus 로고    scopus 로고
    • Diversity and seasonal fluctuations of the dominant members of the bacterial soil community in a wheat field as determined by cultivation and molecular methods
    • Smit E., Leefland P., Gommans S., van den Broek J., van Mil S., and Wernars K. Diversity and seasonal fluctuations of the dominant members of the bacterial soil community in a wheat field as determined by cultivation and molecular methods. Appl. Environ. Microbiol. 67 (2001) 2284-2291
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 2284-2291
    • Smit, E.1    Leefland, P.2    Gommans, S.3    van den Broek, J.4    van Mil, S.5    Wernars, K.6
  • 42
    • 0347761170 scopus 로고    scopus 로고
    • Nitrous oxide reductase (nosZ) gene fragments differ between native and cultivated Michigan soils
    • Stres B., Mahne I., Auguštin G., and Tiedje J.M. Nitrous oxide reductase (nosZ) gene fragments differ between native and cultivated Michigan soils. Appl. Environ. Microbiol. 70 (2004) 301-309
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 301-309
    • Stres, B.1    Mahne, I.2    Auguštin, G.3    Tiedje, J.M.4
  • 43
    • 4344685944 scopus 로고    scopus 로고
    • Reassessing PCR primers targeting nirS, nirK and nosZ genes for community surveys of denitrifying bacteria with DGGE
    • Throbäck I., Enwall K., Jarvis A., and Hallin S. Reassessing PCR primers targeting nirS, nirK and nosZ genes for community surveys of denitrifying bacteria with DGGE. FEMS Microbiol. Ecol. 49 (2004) 401-417
    • (2004) FEMS Microbiol. Ecol. , vol.49 , pp. 401-417
    • Throbäck, I.1    Enwall, K.2    Jarvis, A.3    Hallin, S.4
  • 44
    • 41849095617 scopus 로고    scopus 로고
    • Growth, activity and temperature responses of ammonia oxidizing archaea and bacteria in soil microcosms
    • Tourna M., Freitag T.E., Nicol G.W., and Prosser J.I. Growth, activity and temperature responses of ammonia oxidizing archaea and bacteria in soil microcosms. Environ. Microbiol. 10 (2008) 1357-1364
    • (2008) Environ. Microbiol. , vol.10 , pp. 1357-1364
    • Tourna, M.1    Freitag, T.E.2    Nicol, G.W.3    Prosser, J.I.4
  • 45
    • 0033761564 scopus 로고    scopus 로고
    • Winter fluxes of greenhouse gases from snow-covered agricultural soil: intra-annual and interannual variations
    • van Bochove E., Jones H.G., Bertrand N., and Prevost D. Winter fluxes of greenhouse gases from snow-covered agricultural soil: intra-annual and interannual variations. Global Biogeochem. Cycles. 14 (2000) 113-125
    • (2000) Global Biogeochem. Cycles. , vol.14 , pp. 113-125
    • van Bochove, E.1    Jones, H.G.2    Bertrand, N.3    Prevost, D.4
  • 46
    • 0031728494 scopus 로고    scopus 로고
    • Nitrous oxide emissions from agricultural fields during winter and spring thaw as affected by management practices
    • Wagner-Riddle C., and Thurtell G. Nitrous oxide emissions from agricultural fields during winter and spring thaw as affected by management practices. Nutr. Cycl. Agroecosys. 52 (1998) 151-163
    • (1998) Nutr. Cycl. Agroecosys. , vol.52 , pp. 151-163
    • Wagner-Riddle, C.1    Thurtell, G.2
  • 47
    • 47249156096 scopus 로고    scopus 로고
    • Linking nitrous oxide flux during spring thaw to nitrate denitrification in the soil profile
    • Wagner-Riddle C., Hu Q.C., van Bochove E., and Jayasundra S. Linking nitrous oxide flux during spring thaw to nitrate denitrification in the soil profile. SSSAJ 72 (2008) 908-916
    • (2008) SSSAJ , vol.72 , pp. 908-916
    • Wagner-Riddle, C.1    Hu, Q.C.2    van Bochove, E.3    Jayasundra, S.4
  • 48
    • 0030199941 scopus 로고    scopus 로고
    • Nitrous oxide and carbon dioxide fluxes from a bare soil using a micrometeorological approach
    • Wagner-Riddle C., Thurtell G.W., King K.M., Kidd G.K., and Beauchamp E.G. Nitrous oxide and carbon dioxide fluxes from a bare soil using a micrometeorological approach. J. Environ. Qual. 25 (1996) 898-907
    • (1996) J. Environ. Qual. , vol.25 , pp. 898-907
    • Wagner-Riddle, C.1    Thurtell, G.W.2    King, K.M.3    Kidd, G.K.4    Beauchamp, E.G.5
  • 50
    • 2142761510 scopus 로고    scopus 로고
    • Observation of high seasonal variation in community structure of denitrifying bacteria in arable soil receiving artificial fertilizer and cattle manure by determining T-RFLP of nir gene fragments
    • Wolsing M., and Priemé A. Observation of high seasonal variation in community structure of denitrifying bacteria in arable soil receiving artificial fertilizer and cattle manure by determining T-RFLP of nir gene fragments. FEMS Microbiol. Ecol. 48 (2004) 261-271
    • (2004) FEMS Microbiol. Ecol. , vol.48 , pp. 261-271
    • Wolsing, M.1    Priemé, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.