메뉴 건너뛰기




Volumn 36, Issue 9, 2009, Pages 1154-1164

The high throughput screening of direct regulatory microRNA and their target genes

Author keywords

MicroRNA; P53; P53 DNA binding sites; The prediction of microRNA target genes

Indexed keywords


EID: 72949105105     PISSN: 10003282     EISSN: None     Source Type: Journal    
DOI: 10.3724/SP.J.1206.2009.00099     Document Type: Article
Times cited : (4)

References (26)
  • 1
    • 2442494895 scopus 로고    scopus 로고
    • Ct target genes of the p53 family transcription factors
    • Ct target genes of the p53 family transcription factors. Cell Mol Life Sci, 2004, 61(7-8): 822-842
    • (2004) Cell Mol Life Sci , vol.61 , Issue.7-8 , pp. 822-842
    • Harms, K.1    Nozell, S.2    Chen, X.3
  • 3
    • 37449027604 scopus 로고    scopus 로고
    • MicroRNA and stem cell function
    • Hatfield S, Ruohola-Baker H. MicroRNA and stem cell function. Cell Tissue Res, 2008, 331(1):57-66
    • (2008) Cell Tissue Res , vol.331 , Issue.1 , pp. 57-66
    • Hatfield, S.1    Ruohola-Baker, H.2
  • 4
    • 34248379012 scopus 로고    scopus 로고
    • Impact of mutant p53 functional properties on TP53 mutation patterns and tumor phenotype: Lessons from recent developments in the IARC TP53 database
    • Petitjean A, Mathe E, Kato S, et al. Impact of mutant p53 functional properties on TP53 mutation patterns and tumor phenotype: lessons from recent developments in the IARC TP53 database. Hum Mutat, 2007, 28(6): 622- 629
    • (2007) Hum Mutat , vol.28 , Issue.6 , pp. 622-629
    • Petitjean, A.1    Mathe, E.2    Kato, S.3
  • 5
    • 33646056975 scopus 로고    scopus 로고
    • A genetic screen implicates miRNA-372 and miRNA-373 as oncogenes in testicular germ cell tumors
    • Voorhoeve P M, le Sage C, Schrier M, et al. A genetic screen implicates miRNA-372 and miRNA-373 as oncogenes in testicular germ cell tumors. Cell, 2006, 124(6): 1169-1181
    • (2006) Cell , vol.124 , Issue.6 , pp. 1169-1181
    • Voorhoeve, P.M.1    Le Sage, C.S.M.2
  • 6
    • 33646258751 scopus 로고    scopus 로고
    • Differentially regulated micro-RNAs and actively translated messenger RNA transcripts by tumor suppressor p53 in colon cancer
    • Xi Y, Shalgi R, Fodstad O, et al. Differentially regulated micro-RNAs and actively translated messenger RNA transcripts by tumor suppressor p53 in colon cancer. Clin Cancer Res, 2006, 12(7 Pt 1):2014-2024
    • (2006) Clin Cancer Res , vol.12 , Issue.7 PART. 1 , pp. 2014-2024
    • Xi, Y.1    Shalgi, R.2    Fodstad, O.3
  • 7
    • 34250868124 scopus 로고    scopus 로고
    • Differential regulation of microRNAs by p53 revealed by massively parallel sequencing: MiR-34a is a p53 target that induces apoptosis and Gl -arrest
    • Tarasov V, Jung P, Verdoodt B, et al. Differential regulation of microRNAs by p53 revealed by massively parallel sequencing: miR-34a is a p53 target that induces apoptosis and Gl -arrest. Cell Cycle, 2007, 6(13): 1586-1593
    • (2007) Cell Cycle , vol.6 , Issue.13 , pp. 1586-1593
    • Tarasov, V.1    Jung, P.2    Verdoodt, B.3
  • 8
    • 37049010980 scopus 로고    scopus 로고
    • The guardian's little helper: MicroRNAs in the p53 tumor suppressor network
    • He X, He L, Harmon G J. The guardian's little helper: microRNAs in the p53 tumor suppressor network. Cancer Res, 2007, 67(23): 11099-11101
    • (2007) Cancer Res , vol.67 , Issue.23 , pp. 11099-11101
    • He, X.1    He, L.2    Harmon, G.J.3
  • 9
    • 34250851115 scopus 로고    scopus 로고
    • A microRNA component of the p53 tumour suppressor network
    • He L, He X, Lim L P, et al. A microRNA component of the p53 tumour suppressor network. Nature, 2007, 447(7148): 1130- 1144
    • (2007) Nature , vol.447 , Issue.7148 , pp. 1130-1144
    • He, L.1    He, X.2    Lim, L.P.3
  • 10
    • 0037370020 scopus 로고    scopus 로고
    • A uniform system for microRNA annotation
    • Ambros V, Bartel B, Bartel D P, et al. A uniform system for microRNA annotation. RNA, 2003, 9(3): 277-289
    • (2003) RNA , vol.9 , Issue.3 , pp. 277-289
    • Ambros, V.1    Bartel, B.2    Bartel, D.P.3
  • 11
    • 0026849821 scopus 로고
    • Definition of a consensus binding site for p53
    • el-Deiry W S, Kern S E, Pietenpol J A, et al. Definition of a consensus binding site for p53. Nat Genet, 1992, 1(1): 45-59
    • (1992) Nat Genet , vol.1 , Issue.1 , pp. 45-59
    • El-Deiry, W.S.1    Kern, S.E.2    Pietenpol, J.A.3
  • 13
    • 0037173059 scopus 로고    scopus 로고
    • The p53MH algorithm and its application in detecting p53-responsive genes
    • Hoh J, Jin S, Parrado T, et al. The p53MH algorithm and its application in detecting p53-responsive genes. Proc Natl Acad Sci USA, 2002, 99(13): 8467-8472
    • (2002) Proc Natl Acad Sci USA , vol.99 , Issue.13 , pp. 8467-8472
    • Hoh, J.1    Jin, S.2    Parrado, T.3
  • 14
    • 33947180511 scopus 로고    scopus 로고
    • The p53 knowledgebase: An integrated information resource for p53 research
    • Lim Y P, Lim T T, Chan Y L, et al. The p53 knowledgebase: an integrated information resource for p53 research. Oncogene, 2007, 26(11): 1517-1531
    • (2007) Oncogene , vol.26 , Issue.11 , pp. 1517-1531
    • Lim, Y.P.1    Lim, T.T.2    Chan, Y.L.3
  • 15
    • 33846107777 scopus 로고    scopus 로고
    • TRED: A transcriptional regulatory element database, new entries and other development
    • (Database issue)
    • Jiang C, Xuan Z, Zhao F, et al. TRED: a transcriptional regulatory element database, new entries and other development. Nucleic Acids Res, 2007, 35(Database issue): D137-140
    • (2007) Nucleic Acids Res , vol.35
    • Jiang, C.1    Xuan, Z.2    Zhao, F.3
  • 16
    • 33750318273 scopus 로고    scopus 로고
    • A guide through present computational approaches for the identification of mammalian microRNA targets
    • Sethupathy P, Megraw M, Hatzigeorgiou A G. A guide through present computational approaches for the identification of mammalian microRNA targets. Nat Methods, 2007, 3(11): 881 - 896
    • (2007) Nat Methods , vol.3 , Issue.11 , pp. 881-896
    • Sethupathy, P.1    Megraw, M.2    Hatzigeorgiou, A.G.3
  • 17
    • 84972545970 scopus 로고
    • Survey of exact inference for contingency tables
    • Agresti A. Survey of exact inference for contingency tables. Statist Sci, 1992, 7(1): 131-153
    • (1992) Statist Sci , vol.7 , Issue.1 , pp. 131-153
    • Agresti, A.1
  • 18
    • 34548339681 scopus 로고    scopus 로고
    • MicroRNA regulation of human protein protein interaction network
    • Liang H, Li W H. MicroRNA regulation of human protein protein interaction network. RNA, 2007, 13(9): 1402-1408
    • (2007) RNA , vol.13 , Issue.9 , pp. 1402-1408
    • Liang, H.1    Li, W.H.2
  • 19
    • 60149085396 scopus 로고    scopus 로고
    • The many roles of FAS receptor signaling in the immune system
    • Strasser A, Jost P J, Nagata S. The many roles of FAS receptor signaling in the immune system. Immunity, 2009, 30(2): 180-192
    • (2009) Immunity , vol.30 , Issue.2 , pp. 180-192
    • Strasser, A.1    Jost, P.J.2    Nagata, S.3
  • 20
    • 0029097759 scopus 로고
    • Radiation-induced cell cycle arrest compromised by p21 deficiency
    • Brugarolas J, Chandrasekaran C, Gordon J I, et al. Radiation-induced cell cycle arrest compromised by p21 deficiency. Nature, 1995, 377(6549): 552-557
    • (1995) Nature , vol.377 , Issue.6549 , pp. 552-557
    • Brugarolas, J.1    Chandrasekaran, C.2    Gordon, J.I.3
  • 21
    • 30344478870 scopus 로고    scopus 로고
    • A globalMap of p53 transcription-factor binding sites in the human genome
    • Wei C L, Wu Q, Vega V B, et al. A globalMap of p53 transcription-factor binding sites in the human genome. Cell, 2006, 124(1): 207-219
    • (2006) Cell , vol.124 , Issue.1 , pp. 207-219
    • Wei, C.L.1    Wu, Q.2    Vega, V.B.3
  • 22
    • 59149091973 scopus 로고    scopus 로고
    • Potentially important microRNA cluster on chromosome 17pl3.1 in primary peritoneal carcinoma
    • Flavin R J, Smyth P C, Laios A, et al. Potentially important microRNA cluster on chromosome 17pl3.1 in primary peritoneal carcinoma. Mod Pathol, 2009, 22(2): 197-205
    • (2009) Mod Pathol , vol.22 , Issue.2 , pp. 197-205
    • Flavin, R.J.1    Smyth, P.C.2    Laios, A.3
  • 23
    • 33748286897 scopus 로고    scopus 로고
    • Human microRNA clusters: Genomic organization and expression profile in leukemia cell lines
    • Yu J, Wang F, Yang G H, et al. Human microRNA clusters: genomic organization and expression profile in leukemia cell lines. Biochem Biophys Res Commun, 2006, 349(1): 59-68
    • (2006) Biochem Biophys Res Commun , vol.349 , Issue.1 , pp. 59-68
    • Yu, J.1    Wang, F.2    Yang, G.H.3
  • 24
    • 39849111033 scopus 로고    scopus 로고
    • MiRNAminer: A tool for homologous microRNA gene search
    • Artzi S, Kiezun A, Shomron N. miRNAminer: a tool for homologous microRNA gene search. BMC Bioinformatics, 2008, 9: 39
    • (2008) BMC Bioinformatics , vol.9 , pp. 39
    • Artzi, S.1    Kiezun, A.2    Shomron, N.3
  • 25
    • 56749177163 scopus 로고    scopus 로고
    • Alterations of Chkl and Chk2 expression in colon cancer
    • Stawinska M, Cygankiewicz A, Trzcinski R, et al. Alterations of Chkl and Chk2 expression in colon cancer. Int J Colorectal Dis, 2008, 23(12): 1243-1249
    • (2008) Int J Colorectal Dis , vol.23 , Issue.12 , pp. 1243-1249
    • Stawinska, M.1    Cygankiewicz, A.2    Trzcinski, R.3
  • 26
    • 0035142822 scopus 로고    scopus 로고
    • P53 down-regulates CHK1 through p21 and the retinoblastoma protein
    • Goftifredi V, Kami-Schmidt O, Shieh S S, et al. p53 down-regulates CHK1 through p21 and the retinoblastoma protein. Mol Cell Biol, 2001, 21(4): 1066-1076
    • (2001) Mol Cell Biol , vol.21 , Issue.4 , pp. 1066-1076
    • Goftifredi, V.1    Kami-Schmidt, O.2    Shieh, S.S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.