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Volumn , Issue , 2009, Pages

Compressed pattern matching in DNA sequences using multithreaded technology

Author keywords

Compressed pattern matching; D BM; Multithreaded programming technology

Indexed keywords

BOYER-MOORE METHOD; COMPRESSED PATTERN MATCHING; DNA PATTERNS; MULTI-THREADED ALGORITHMS; MULTITHREADED PROGRAMMING; MULTITHREADED TECHNOLOGY; SPACE SAVINGS;

EID: 72749122518     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ICBBE.2009.5162550     Document Type: Conference Paper
Times cited : (4)

References (15)
  • 1
    • 13844291872 scopus 로고    scopus 로고
    • Don Adjeroh, Yong Zhang, Amar Mukherjee, Matt Powell, Tim Bell, DNA Sequence Compression Using the Burrows-Wheeler Transform, csb,pp.303, IEEE Computer Society Bioinformatics Conference (CSB'02), 2002
    • Don Adjeroh, Yong Zhang, Amar Mukherjee, Matt Powell, Tim Bell, "DNA Sequence Compression Using the Burrows-Wheeler Transform, " csb,pp.303, IEEE Computer Society Bioinformatics Conference (CSB'02), 2002
  • 3
    • 0000100455 scopus 로고
    • A new challenge for compression algorithms: Genetic sequences
    • Info. Processing & Management
    • Grumbach S and Tahi F., "A new challenge for compression algorithms: genetic sequences", Info. Processing & Management, 30: 875-886, 1994.
    • (1994) , vol.30 , pp. 875-886
    • Grumbach, S.1    Tahi, F.2
  • 4
    • 0003573193 scopus 로고
    • A block-sorting lossless data compression algorithm
    • Technical Report, Digital Equipment Corporation, Palo Alto, CA
    • Burrows M. and Wheeler D.J., "A block-sorting lossless data compression algorithm", Technical Report, Digital Equipment Corporation, Palo Alto, CA, 1994.
    • (1994)
    • Burrows, M.1    Wheeler, D.J.2
  • 5
    • 24144459070 scopus 로고    scopus 로고
    • Pattern Matching in LZW Compressed Files
    • Aug
    • Tao Tao, Amar Mukherjee, "Pattern Matching in LZW Compressed Files," IEEE Transactions on Computers, vol. 54, no. 8, pp. 929-938, Aug., 2005.
    • (2005) IEEE Transactions on Computers , vol.54 , Issue.8 , pp. 929-938
    • Tao, T.1    Mukherjee, A.2
  • 6
    • 84948415150 scopus 로고    scopus 로고
    • Searching BWT Compressed Text with the Boyer-Moore Algorithm and Binary Search
    • Apr
    • T. Bell, M. Powell, A. Mukherjee, and D. Adjeroh, "Searching BWT Compressed Text with the Boyer-Moore Algorithm and Binary Search", Proc. Data Compression Conf., pp. 112-121, Apr. 2002.
    • (2002) Proc. Data Compression Conf , pp. 112-121
    • Bell, T.1    Powell, M.2    Mukherjee, A.3    Adjeroh, D.4
  • 8
    • 0017547820 scopus 로고
    • A Fast String Searching Algorithm[J]
    • BOYER R S,MOORE J S.A Fast String Searching Algorithm[J]. Communications of the ACM, 1977,20(10):762-772.
    • (1977) Communications of the ACM , vol.20 , Issue.10 , pp. 762-772
    • BOYER, R.S.1    MOORE, J.S.2
  • 13
    • 85031750850 scopus 로고
    • Implementing Ada tasking in a multiprocessing, multithreaded UNIX environment, NewYork: ACM Special Interest Group on Ada Programming
    • Karen L. Sielski, "Implementing Ada tasking in a multiprocessing, multithreaded UNIX environment", NewYork: ACM Special Interest Group on Ada Programming Language, 1992: 512-517.
    • (1992) Language , pp. 512-517
    • Sielski, K.L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.