Influence of context and behavior on stimulus reconstruction from neural activity in primary auditory cortex

Journal of Neurophysiology

Volumn 102, Issue 6, 2009, Pages 3329-3339

  Mesgarani, Nima ^a   David, Stephen V ^a   Fritz, Jonathan B ^a   Shamma, Shihab A ^a  

^a UNIVERSITY OF MARYLAND   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL EXPERIMENT; ARTICLE; AUDITORY CORTEX; AUDITORY STIMULATION; CELL POPULATION; FEMALE; FERRET; MATHEMATICAL ANALYSIS; NERVE CELL; NERVE CELL PLASTICITY; NOISE; NONHUMAN; PHONEME; PRIORITY JOURNAL; SAMPLE SIZE; SOUND DETECTION; SPEECH;

ACOUSTIC STIMULATION; ANIMALS; AUDITORY CORTEX; BRAIN MAPPING; COMPUTER SIMULATION; EVOKED POTENTIALS, AUDITORY; FEMALE; FERRETS; MODELS, NEUROLOGICAL; NEURONAL PLASTICITY; NEURONS;

EID: 72749084382     PISSN: 00223077     EISSN: 15221598     Source Type: Journal    
DOI: 10.1152/jn.91128.2008     Document Type: Article

References (49)

1. AudioSamples. www.ee.umd.edu/~mnima/Reconstruction.
2. Barlow HB. Single units and sensation: a neuron doctrine for perceptual psychology? Perception 1: 371-394, 1972.
3. Bialek W, Rieke F, de Ruyter van Steveninck RR, Warland D. Reading a neural code. Science 252: 1854-1857, 1991.
4. Buracas GT, Zador AM, DeWeese MR, Albright TD. Efficient discrimination of temporal patterns by motion-sensitive neurons in primate visual cortex. Neuron 20: 959-969, 1998.
5. Butts DA, Goldman MS. Tuning curves, neuronal variability, and sensory coding. PLoS Biol 4: e92, 2006.
6. Chi T, Ru P, Shamma SA. Multiresolution spectrotemporal analysis of complex sounds. J Acoust Soc Am 118: 887-906, 2005. (Pubitemid 41129224)
7. Christianson GB, Sahani M, Linden JF. The consequences of response nonlinearities for interpretation of spectrotemporal receptive fields. J Neurosci 28: 446-455, 2008.
8. David SV, Gallant JL. Predicting neuronal responses during natural vision. Network 16: 239-260, 2005.
9. de Ruyter van Steveninck RR, Lewen GD, Strong SP, Koberle R, Bialek W. Reproducibility and variability in neural spike trains. Science 275: 1805-1808, 1997.
10. De Valois RL, Yund EW, Hepler N. The orientation and direction selectivity of cells in macaque visual cortex. Vision Res 22: 531-544, 1982.
11. Draper NR, Smith H. Applied Regression Analysis. New York: Wiley, 1998.
12. Efron B, Tibshirani R. An Introduction to the Bootstrap. New York: Chapman and Hall, 1993.
13. Eggermont JJ, Ponton CW. The neurophysiology of auditory perception: from single units to evoked potentials. Audiol Neurootol 7: 71-99, 2002.
14. Engineer CT, Perez CA, Chen YH, Carraway RS, Reed AC, Shetake JA, Jakkamsetti V, Chang KQ, Kilgard MP. Cortical activity patterns predict speech discrimination ability. Nat Neurosci 11: 603-608, 2008. (Pubitemid 351595203)
15. Ferragamo MJ, Haresign T, Simmons JA. Frequency tuning, latencies, and responses to frequency-modulated sweeps in the inferior colliculus of the echolocating bat, Eptesicus fuscus. J Comp Physiol [A] 182: 65-79, 1998. (Pubitemid 28104744)
16. Fritz J, Bozak D, Depireux DA, Dobbins H, Tillman A, Shamma SA. Measuring the ferret spectro-temporal transfer function (MTF) using a conditioned behavioral task. In: Association for Research in Otolaryngology, 2002, Abs.: 802.
17. Fritz J, Shamma S, Elhilali M, Klein D. Rapid task-related plasticity of spectrotemporal receptive fields in primary auditory cortex. Nat Neurosci 6: 1216-1223, 2003. (Pubitemid 37346043)
18. Fritz JB, Elhilali M, David SV, Shamma SA. Does attention play a role in dynamic receptive field adaptation to changing acoustic salience in A1? Hear Res 229: 186-203, 2007. (Pubitemid 46924825)
19. Fritz JB, Elhilali M, Shamma SA. Differential dynamic plasticity of A1 receptive fields during multiple spectral tasks. J Neurosci 25: 7623-7635, 2005. (Pubitemid 41170619)
20. Garofolo JS, Lamel LF, Fisher WM, Fiscus JG, Pallett DS, Dahlgrena NL, Zue V. TIMIT Acoustic-Phonetic Continuous Speech Corpus. Linguistic Data Consortium, 1993.
21. Georgopoulos AP, Schwartz AB, Kettner RE. Neuronal population coding of movement direction. Science 233: 1416-1419, 1986.
22. Gielen CCAM, Hesselmans GHFM, Johannesma PIM. Sensory interpretation of neural activity patterns. Math Biosci 88: 15-35, 1988.
23. Greenberg S. Understanding speech understanding: toward a unified theory of speech perception. Proceedings of the ESCA Tutorial and Advanced Research Workshop on the Auditory Basis of Speech Perception. Keele, England, 1996 p. 1-8.
24. Greenberg S, Ainsworth WA, Popper AN, Fay RR. Speech Processing in the Auditory System. New York: Springer-Verlag, 2004, vol.18.
25. Haag J, Borst A. Active membrane properties and signal encoding in graded potential neurons. J Neurosci 18: 7972-7986, 1998. (Pubitemid 28441035)
26. Han YK, Kover H, Insanally MN, Semerdjian JH, Bao S. Early experience impairs perceptual discrimination. Nat Neurosci 10: 1191-1197, 2007. (Pubitemid 47339943)
27. Hesselmans GH, Johannesma PI. Spectro-temporal interpretation of activity patterns of auditory neurons. Math Biosci 93: 31-51, 1989.
28. Klein DJ, Depireux DA, Simon JZ, Shamma SA. Robust spectrotemporal reverse correlation for the auditory system: optimizing stimulus design. J Comput Neurosci 9: 85-111, 2000.
29. Kowalski N, Depireux DA, Shamma SA. Analysis of dynamic spectra in ferret primary auditory cortex. I. Characteristics of single-unit responses to moving ripple spectra. J Neurophysiol 76: 3503-3523, 1996. (Pubitemid 26378117)
30. Ladefoged P. Course in Phonetics. Heinle. Orlando: Harcourt Brace, 2005.
31. Mazer JA, Vinje WE, McDermott J, Schiller PH, Gallant JL. Spatial frequency and orientation tuning dynamics in area V1. Proc Natl Acad Sci USA 99: 1645-1650, 2002. (Pubitemid 34136546)
32. McAdams CJ, Maunsell JH. Effects of attention on orientation-tuning functions of single neurons in macaque cortical area V4. J Neurosci 19: 431-441, 1999.
33. Mesgarani N, David SV, Fritz JB, Shamma SA. Phoneme representation and classification in primary auditory cortex. J Acoust Soc Am 123: 899-909, 2008. (Pubitemid 351208356)
34. Miyawaki Y, Uchida H, Yamashita O, Sato MA, Morito Y, Tanabe HC, Sadato N, Kamitani Y. Visual image reconstruction from human brain activity using a combination of multiscale local image decoders. Neuron 60: 915-929, 2008.
35. Rieke F, Bodnar DA, Bialek W. Naturalistic stimuli increase the rate and efficiency of information transmission by primary auditory afferents. R Soc Lond Ser B 262: 259-265, 1995. (Pubitemid 26023704)
36. Sachs MB, Young ED. Encoding of steady-state vowels in the auditory nerve: representation in terms of discharge rate. J Acoust Soc Am 66: 470-479, 1979.
37. Salinas E, Sejnowski TJ. Correlated neuronal activity and the flow of neural information. Nat Rev Neurosci 2: 539-550, 2001. (Pubitemid 33679827)
38. Schreiner CE, Langner G. Periodicity coding in the inferior colliculus of the cat. II. Topographical organization. J Neurophysiol 60: 1823-1840, 1988.
39. Seneft S, Zue V. Transcription and Alignment of the Timit Database. Edited by Garofolo JS. Gaithersburg, MD: National Institute of Standard and Technology (NIST), 1988.
40. Shamma SA. Speech processing in the auditory system. I. The representation of speech sounds in the responses of the auditory nerve. J Acoust Soc Am 78: 1612-1621, 1985. (Pubitemid 16223801)
41. Shannon RV, Zeng FG, Kamath V, Wygonski J, Ekelid M. Speech recognition with primarily temporal cues. Science 270: 303-304, 1995.
42. Singh NC, Theunissen FE. Modulation spectra of natural sounds and ethological theories of auditory processing. J Acoust Soc Am 114: 3394-3411, 2003.
43. Stanley GB, Li FF, Dan Y. Reconstruction of natural scenes from ensemble responses in the lateral geniculate nucleus. J Neurosci 19: 8036-8042, 1999. (Pubitemid 30225799)
44. Steinschneider M, Volkov IO, Fishman YI, Oya H, Arezzo JC, Howard MA III. Intracortical responses in human and monkey primary auditory cortex support a temporal processing mechanism for encoding of the voice onset time phonetic parameter. Cereb Cortex 15: 170-186, 2005. (Pubitemid 40111078)
45. Theunissen FE, David SV, Singh NC, Hsu A, Vinje WE, Gallant JL. Estimating spatio-temporal receptive fields of auditory and visual neurons from their responses to natural stimuli. Network 12: 289-316, 2001. (Pubitemid 33626948)
46. Wallis JD, Miller EK. Neuronal activity in primate dorsolateral and orbital prefrontal cortex during performance of a reward preference task. Eur J Neurosci 18: 2069-2081, 2003.
47. Warland DK, Reinagel P, Meister M. Decoding visual information from a population of retinal ganglion cells. J Neurophysiol 78: 2336-2350, 1997. (Pubitemid 27495462)
48. Woolley SM, Fremouw TE, Hsu A, Theunissen FE. Tuning for spectrotemporal modulations as a mechanism for auditory discrimination of natural sounds. Nat Neurosci 8: 1371-1379, 2005. (Pubitemid 41630426)
49. Yang XWK, Shamma SA. Auditory representations of acoustic signals. IEEE Trans Inform Theory 38: 824-839, 1992.