High genetic differentiation and low genetic diversity in Incarvillea younghusbandii, an endemic plant of Qinghai-Tibetan Plateau, revealed by AFLP markers

Biochemical Systematics and Ecology

Volumn 37, Issue 5, 2009, Pages 589-596

  Zhu, Yong ^a   Geng, Yupeng ^a,b   Tersing, Tashi ^c   Liu, Nian ^a   Wang, Qingbiao ^a   Zhong, Yang ^a,c  

^a FUDAN UNIVERSITY   (China)

^b YUNNAN UNIVERSITY   (China)

^c TIBET UNIVERSITY   (China)

Author keywords

AFLP; Genetic diversity; Incarvillea younghusbandii; Population structure; Qinghai Tibetan Plateau

Indexed keywords

COMMERCIAL SPECIES; CONSERVATION GENETICS; CONSERVATION PLANNING; DICOTYLEDON; DIVERSITY INDEX; ENDEMIC SPECIES; GENETIC DIFFERENTIATION; GENETIC MARKER; HORTICULTURE; MEDICINAL PLANT; POPULATION STRUCTURE;

CHINA; QINGHAI-XIZANG PLATEAU;

BIGNONIACEAE; INCARVILLEA YOUNGHUSBANDII;

EID: 72549106658     PISSN: 03051978     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bse.2009.10.007     Document Type: Article

References (48)

1. Aitken S.N., Yeaman S., Holliday J.A., Wang T.L., and Curtis-McLane S. Adaptation, migration or extirpation: climate change outcomes for tree populations. Evol. Appl. 1 (2008) 95-111
2. Bertoni B.W., Filho S.A., Martins E.R., Filho C.F.D., França S.C., Pereira A.M.S., Telles M.P., and Filho J.A. Genetic variability in natural populations of Zeyheria montana Mart. from the Brazilian Cerrado. Sci. Agric. 64 (2007) 409-415
3. Boyce M.S. Population viability analysis. Annu. Rev. Ecol. Syst. 23 (1992) 481-506
4. Chen S.T., Guan K.Y., Zhou Z.K., and Toshiyuki F. Pollen morphology of the genus Incarvillea (Bignoniaceae). Acta Bot. Yunnanica 25 (2003) 457-464
5. Chen S.T., Guan K.Y., Zhou Z.K., Richard O., and Quentin C. Molecular phylogeny of Incarvillea (Bigboniaceae) based on ITS and TRNL-F Sequences. Am. J. Bot. 92 (2005) 625-633
6. Gao P., Jiang S.P., Wang J.W., Han F., Wang J., and Gao P. Initial research on effect of enrich the blood of Incarvillea younghusbandii. Sichuan J. Zool. 25 (2006) 182-184
7. Ge X.J., Zhang L.B., Yuan Y.M., Hao G., and Chiang T.Y. Strong genetic differentiation of the East-Himalayan Megacodon stylophorus (Gentianaceae) detected by inter-simple sequence repeats (ISSR). Biodivers. Conserv. 14 (2005) 849-861
8. Geng Y.P., Tang S.Q., Tashi T., Song Z.P., Zhang G.R., Zeng L.Y., Zhao J.Y., Wang L., Shi J., Chen J.K., and Zhong Y. Fine- and landscape-scale spatial genetic structure of cushion rockjasmine, Androsace tapete (Primulaceae), across southern Qinghai-Tibetan Plateau. Genetica 135 (2009) 419-427
9. Haase P. Isozyme variability and biogeography of Nothofagus truncata (Fagaceae). New Zeal. J. Bot. 30 (1992) 315-328
10. Hamrick J.L., and Godt M.J.W. Allozyme diversity in plant species. In: Brown A.H.D., Clegg M.T., Kahler A.L., and Weir B.S. (Eds). Plant Population Genetics, Breeding, And Genetic Resources (1989), Sinauer Associates, Sunderland, MA 43-63
11. Hamrick J.L., and Godt M.J.W. Conservation genetics of endemic plant species. In: Avise J.C., and Hamrick J.L. (Eds). Conservation Genetics: Case Histories From Nature (1996), Chapman & Hall, New York
12. Han Y., Dai C., Yang C.F., Wang Q.F., and Motley T.J. Anther appendages of Incarvillea trigger a pollen-dispensing mechanism. Ann. Bot. 102 (2008) 473-479
13. Hensen I., and Oberprieler C. Effects of population size on genetic diversity and seed production in the rare Dictamnus albus (Rutaceae) in Central Germany. Conserv. Genet. 6 (2005) 63-73
14. Hogbin P.M., and Peakall R. Evaluation of the contribution of genetic research to the management of the endangered plant Zieria prostrate. Conserv. Biol. 13 (1999) 514-522
15. Jayaram K., and Prasad M.N. Genetic diversity in Oroxylum indicum (L.) Vent. (Bignoniaceae), a vulnerable medicinal plant by random amplified polymorphic DNA marker. Afr. J. Biotechnol. 7 (2008) 254-262
16. Jorgenson M.T., Racine C.H., Walters J.C., and Osterkamp T.E. Permafrost degradation and ecological changes associated with a warming in central Alaska. Clim. Change 48 (2001) 551-579
17. Klein J.A., Harte J., and Zhao X.Q. Decline in medicinal and forage species with warming is mediated by plant traits on the Tibetan plateau. Ecosystems 11 (2008) 775-789
18. Krauss S.L. Low genetic diversity in Persoonia mollis (Proteaceae), a fire-sensitive shrub occurring in a fire-prone habitat. Heredity 78 (1997) 41-49
19. Lei Y.D., Gao H., Tashi T., Shi S.H., and Zhong Y. Determination of genetic variation in Rhodiola crenulata from the Hengduan mountains region, China using inter-simple sequence repeats. Genet. Mol. Biol. 29 (2006) 339-344
20. Li X.J., Yang H.L., and Liu J.Q. Genetic variation within and between populations of the Qinghai-Tibetan Plateau endemic Gentiana straminea (Gentianaceae) revealed by RAPD markers. Belg. J. Bot. 141 (2008) 95-102
21. Liang S.H., Chen J., Jing X.M., Wan L., and Gong B. Regularity of vegetation coverage changes in the Tibetan Plateau over the last 21 years. Adv. Earth Sci. 22 (2007) 33-40
22. Liu J.M., Wang L., Geng Y.P., Wang Q.B., Luo L.J., and Zhong Y. Genetic diversity and population structure of Lamiophlomis rotata (Lamiaceae), an endemic species of Qinghai-Tibet Plateau. Genetica 128 (2006) 385-394
23. Lu J.Y., Yang X.M., and Ma R.J. Genetic diversity of clonal plant Polygonum viviparum based RAPD in eastern Qinghai-Tibet Plateau of China. J. Northwest Normal University 44 (2008) 66-72
24. Mcguire A.D. Environmental variation, vegetation distribution, carbon dynamics and water/energy exchange at high latitudes. J. Veg. Sci. 13 (2002) 301-314
25. Moran G.F., Muona O., and Bell J.C. Acacia mangium: a tropical forest tree of the coastal lowlands with low genetic diversity. Evolution 43 (1989) 231-235
26. Nybom H. Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Mol. Ecol. (2004) 1143-1155
27. Nei M. Genetic distance between populations. Am. Nat. 106 (1972) 283-292
28. Nei M., and Li W.H. Mathematical-model for studying genetic-variation in terms of restriction endonucleases. PNAS 76 (1979) 5269-5273
29. Pan W.G., Jang S.P., Luo P., Wu J., and Gao P. Isolation, purification and structure identification of antioxidant compound from the roots of Incarvillea younghusbandii Sprague and its life span prolonging effect in Drosophila melanogaster. Nat. Prod. Res. 22 (2008) 719-725
30. Peakall R., and Smouse P. GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol. Ecol. Notes 6 (2006) 288-295
31. Pritchard J.K., Stephens M., and Donnelly P. Inference of population structure using multilocus genotype data. Genetics 155 (2000) 945-959
32. Pritchard J.K., and Wen W. Documentation for STRUCTURE Software, Version 2 (2003), Department of Human Genetics. University of Chicago, Chicago
33. Qiu Y.L., and Parks C.R. Disparity of allozyme variation levels in three Magnolia (Magnoliaceae) species from the southeastern United States. Am. J. Bot. 81 (1994) 1300-1308
34. Qu R.M., Li X.J., Luo Y.B., Dong M., Xu H.L., Chen X., and Dafni A. Wind-dragged corolla enhances self-pollination: a new mechanism of delayed self-pollination. Ann. Bot. 100 (2007) 1155-1164
35. Swofford D.L. Paup 4.0: Phylogenetic Analysis Using Parsimony And Other Methods Version 4.0 Beta Version (1998), Laboratory of Molecular Systematics Smithsonian Institution
36. Thompson L.G., Yao T., Mosley-Thompson E., Davis M.E., Henderson K.A., and Lin P.N. A high-resolution millennial record of the South Asian monsoon from Himalayan ice cores. Science 289 (2000) 1916-1919
37. Van-Treuren R., Bijlsma R., Ouborg N.J., and Van-Delden W. The significance of genetic erosion in the process of extinction. I. Genetic differentiation in Salvia pratensis and Scabiosa columbaria in relation to population size. Heredity 66 (1991) 181-189
38. Vos P., Hogers R., Bleeker M., Reijans M., Van-Delee T., Hornes M., Frijters A., Pot J., Peleman J., Kuiper M., and Zabeau M. AFLP-a new technique for DNA-fingerprinting. Nucleic Acids Res. 23 (1995) 4407-4414
39. Wu C.Y. Vegetation of China (1980), Science Press, Beijing
40. Wu C.Y. Flora of Tibet (1987), Science Press, Beijing
41. Wu C.Y., and Wang W.C. Flora of China vol. 69 (1990), Science Press, Beijing pp. 34-36
42. Wu S.G., Yang Y.P., and Fei Y. On the flora of the alpine region in the Qinghai-Xizang (Tibet) plateau. Acta Bot. Yunnanica 17 (1995) 233-250
43. Xia T., Chen S.L., Chen S.Y., and Ge X.J. Genetic variation within and among populations of Rhodiola alsia (Crassulaceae) native to the Tibetan Plateau as detected by ISSR markers. Biochem. Genet. 43 (2005) 87-101
44. Xia T., Chen S.L., Chen S.Y., Zhang D.F., Zhang D.J., Gao Q.B., and Ge X.J. ISSR analysis of genetic diversity of the Qinghai-Tibet Plateau endemic Rhodiola chrysanthemifolia (Crassulaceae). Biochem. Syst. Ecol. 35 (2007) 209-214
45. Yeh F.C., Yang R., Boyle T.J., Ye Z., and Xiyan J.M. Popgene32, Microsoft Windows-Based Freeware for Population Genetic Analysis, Version 1.32 (2000), Molecular Biology and Biotechnology Centre, University of Alberta, Edmonton, Alberta, Canada
46. Zhang D.F., Chen S.L., Chen S.Y., Zhang D.J., and Gao Q.B. Patterns of genetic variation in Swertia przewalskii, an endangered endemic species of the Qinghai-Tibet Plateau. Biochem. Genet. 45 (2007) 33-50
47. Zhao Q.F., Wang G., Li Q.X., Ma S.R., Cui Y., and Grillo M. Genetic diversity of five Kobresia species along the eastern Qinghai-Tibet Plateau in China. Hereditas 143 (2006) 33-40
48. Zheng W., Wang L.Y., Meng L.H., and Liu J.Q. Genetic variation in the endangered Aniso dustanguticus (Solanaceae), an alpine perennial endemic to the Qinghai-Tibetan Plateau. Genetica 132 (2008) 123-129