Procrustean rotation in concert with principal component analysis of molecular dynamics trajectories: Quantifying global and local differences between conformational samples

Journal of Chemical Physics

Volumn 131, Issue 22, 2009, Pages

  Oblinsky, Daniel G ^a   Vanschouwen, Bryan M B ^a   Gordon, Heather L ^a   Rothstein, Stuart M ^a  

^a BROCK UNIVERSITY   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

BEST FIT; BOOTSTRAP RESAMPLING; ESTIMATE PRECISION; MATRIX; MODEL PROTEINS; MOLECULAR CONFORMATION; MOLECULAR DYNAMICS TRAJECTORIES; MOLECULAR SYSTEMS; QUANTITATIVE MEASURES; TARGET MATRICES; WILD TYPES;

MOLECULAR DYNAMICS; NANOFLUIDICS; PROTEINS; ROTATION; TARGETS; TRAJECTORIES;

PRINCIPAL COMPONENT ANALYSIS;

BACTERIAL PROTEIN; GUANINE NUCLEOTIDE BINDING PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; CONFORMATION; MOLECULAR DYNAMICS; MOLECULAR GENETICS; PRINCIPAL COMPONENT ANALYSIS;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; GTP-BINDING PROTEINS; MODELS, MOLECULAR; MOLECULAR CONFORMATION; MOLECULAR DYNAMICS SIMULATION; MOLECULAR SEQUENCE DATA; PRINCIPAL COMPONENT ANALYSIS;

EID: 72449170010     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.3268625     Document Type: Article

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