Molecular characterization of sclerospora graminicola, the incitant of pearl millet downy mildew using ISSR markers

Journal of Phytopathology

Volumn 157, Issue 11-12, 2009, Pages 748-755

  Sudisha, Jogaiah ^a   Kumar, Soshee Ananda ^b   Thakur, Ram Padartha ^c   Rao, Veeranki Panduranga ^c   Shetty, Hunthrike Shekar ^a  

^a UNIVERSITY OF MYSORE   (India)

^b INDIAN INSTITUTE OF SCIENCE   (India)

^c INTERNATIONAL CROPS RESEARCH INSTITUTE FOR THE SEMI ARID TROPICS ICRISAT   (India)

Author keywords

DNA fingerprinting; Inter simple ISSR markers; Pennisetum glaucum; Sclerospora graminicola

Indexed keywords

CLUSTER ANALYSIS; DNA; DNA FINGERPRINTING; FUNGAL DISEASE; FUNGUS; GENETIC MARKER; GENETIC VARIATION; MILLET; MOLECULAR ANALYSIS; POLYMORPHISM;

ASIA; EURASIA; INDIA; SOUTH ASIA;

PENNISETUM GLAUCUM; PERONOSPORACEAE; SCLEROSPORA GRAMINICOLA;

EID: 71049163303     PISSN: 09311785     EISSN: 14390434     Source Type: Journal    
DOI: 10.1111/j.1439-0434.2009.01547.x     Document Type: Article

References (32)

1. Amruthesh KN. Investigations on pathogen variability, host resistance and durability in pearl millet downy mildew interaction. PhD Thesis, Mysore, India, University of Mysore, 2000.
2. Bhat SS. Investigations on the biology and control of Sclerospora graminicola on Bajra. PhD Thesis, Mysore, India, University of Mysore, 1973.
3. Blair MW, Panaud O, McCouch SR 1999) ISSR amplification for analysis of microsatellite motif frequency and fingerprinting in rice (O. sativa L.). Theor Appl Genet 98 : 780 792.
4. Cooke DEL, Lees AK 2004) Markers, old and new, for examining Phytophthora infestans diversity. Plant Pathol 53 : 692 704.
5. Cramer RA, Byrne PF, Brick MA, Panella L, Wickliffe E, Schwartz HF 2003) Characterization of Fusarium oxysporum isolates from common bean and sugar beet using pathogenecity assays and RAPD markers. J Phytopathol 15 : 352 360.
6. Davierwala AP, Chowdari KV, Shivkumar Reddy APK, Ranjekar PK, Gupta VS 2000) Use of three different marker systems to estimate genetic diversity of Indian elite rice varieties. Genetica 108 : 269 284.
7. Dice LR 1945) Measures of the amount of ecological association between species. Ecology 26 : 297 302.
8. Felsenstein J 2002) PHYLIP (Phylogeny Inference Package) version 3.6a3. Distributed by the author, Seattle, WA, Department of Genome Sciences, University of Washington.
9. Hess DE, Thakur RP, Hash CT, Sereme P, Magill CW 2002) Pearl millet downy mildew: problems and control strategies for the new millennium. In : Leslie JF (ed Sorghum and Millets Diseases, Hoboken, NJ, Wiley, pp. 37 41.
10. Khairwal IS 2008) Pearl Millet Coordinators Review Report. Mandor, Jodhpur, Indian Council of Agricultural Research, pp. 1 23.
11. Kohn MH, Pelz H, Wayne RK 2000) Natural selection mapping of the warfarin-resistance gene. Proc Natl Acad Sci 97 : 7911 7915.
12. Nei M 1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89 : 583 590.
13. Nene YL, Singh SD 1976) Downy mildew and ergot of pearl millet. PANS 22 : 366 385.
14. Parsons BJ, Newbury JH, Jackson MT, Ford-Lioyd BV 1997) Contrasting genetic diversity relationships are revealed in rice (oryza sativa L.) using different marker types. Mol Breeding 3 : 115 125.
15. Pushpavathi B, Thakur RP, Chandrashekara Rao K, Rao VP 2006) Characterization of Sclerospora graminicola isolates from pearl millet for virulence and genetic diversity. Plant Pathol J 22 : 28 35.
16. Reddy P, Sarla N, Siddiq EA 2002) Inter simple sequence repeat (ISSR) polymorphism and its application in plant breeding. Euphytica 128 : 9 17.
17. Sastry JG, Ramakrishna W, Sivaramakrishnan S, Rao VP, Thakur RP, Singru RS, Gupta VS, Ranjekar PK 1995) DNA fingerprinting detects genetic variability in pearl millet downy mildew pathogen (Sclerospora graminicola). Theor Appl Genet 91 : 856 861.
18. Sastry JG, Sivaramakrishnan S, Rao VP, Thakur RP, Singru RS, Gupta VS, Ranjekar PK 2001) Genetic basis of host specificity in Sclerospora graminicola, the pearl millet downy mildew pathogen. Indian J Phytopathol 54 : 323 328.
19. Sexton AC, Howlett BJ 2004) Microsatellite markers reveal genetic differentiation among populations of Sclerotinia sclerotiorum from Australian canola fields. Curr Genet 46 : 357 365.
20. Sharma M, Gupta SK, Sharma TR 2005) Characterization of variability in Rhizoctonia solani by using morphological and molecular markers. J Phytopathol 153 : 449 456.
21. Shetty HS, Ahmad R 1981) Physiologic specialization in Sclerospora graminicola. Indian Phytopathol 34 : 307 309.
22. Shishupala S. Variability in the Pearl Millet Downy Mildew Pathogen. PhD Thesis, Mysore, India, University of Mysore, 1994.
23. Singh SD 1995) Downy mildew of pearl millet. Plant Dis 79 : 545 550.
24. Singru R, Sivaramakrishnan S, Thankur RP, Gupta VS, Ranjekar PK 2003) Detection of genetic variability in pearl millet downy mildew (Sclerospora graminicola) by AFLP. Biochem Genet 41 : 361 374.
25. Sivaramakrishnan S, Thakur RP, Kannan S, Rao VP 2003) Pathogenic and genetic diversity among Indian isolates of Sclerospora graminicola. Indian Phytopathol 56 : 392 397.
26. Thakur RP, Pushpavathi B, Rao VP 1998) Virulence characterization of single-zoospore isolates of Sclerospora graminicola from pearl millet. Plant Dis 82 : 747 751.
27. Thakur RP, Rao VP, Sastry JG, Sivaramakrishnan S, Amruthesh KN, Barbind LD 1999) Evidence for a new virulent pathotype of Sclerospora graminicola on pear millet. J Mycol Plant Pathol 29 : 61 69.
28. Thakur RP, Sivaramakrishna S, Kannan S, Rao VP, Hess DE, Magill CW. Genetic and pathogenic variability among isolates of Sclerospora graminicola, the downy mildew pathogen of pearl millet. In : Phillip-Spencer P, Jeger M (eds Advances in Downy Mildew, Boston, MA, Kluwer Academic Publishers, 2004, Vol. 2, pp. 179 192.
29. Thakur RP, Shetty HS, Khairwal IS 2006) Pearl millet downy mildew research in India: progress and perspectives. Int Sorghum Millets Newsl 47 : 125 130.
30. Vijayan K, Chatterjee SN 2003) ISSR profiling of Indian cultivars of mulberry (Morus spp.) and its relevance to breeding programs. Euphytica 131 : 53 63.
31. Zarafi AB, Emechebe AM, Akpa AD, Alabi O 2005) Effect of metalaxyl on the incidence and severity of pearl millet downy mildew disease in Northern Nigeria. Arch Phytopathol Plant Prot 37 : 261 268.
32. Zwankhuizen MJ, Govers F, Zadoks JC 2000) Inoculum sources and genotypic diversity of Phytophthora infestans in Southern Flevoland, the Netherlands. Eur J Plant Pathol 106 : 667 680.