-
1
-
-
0036139314
-
A neural network classifier capable of recognizing the patterns of all major subcellular structures in fluorescence microscope images of HeLa cells
-
Boland MV, Murphy RF. A neural network classifier capable of recognizing the patterns of all major subcellular structures in fluorescence microscope images of HeLa cells. Bioinformatics 2001;17:1213-1223.
-
(2001)
Bioinformatics
, vol.17
, pp. 1213-1223
-
-
Boland, M.V.1
Murphy, R.F.2
-
2
-
-
3042565868
-
Automatic identification of subcellular phenotypes on human cell arrays
-
DOI 10.1101/gr.2383804
-
Conrad C, Erfle H, Warnat P, Daigle N, Lorch T, Ellenberg J, Pepperkok R, Eils R. Automatic identification of subcellular phenotypes on human cell arrays. Genome Res 2004;14:1130-1136. (Pubitemid 38811549)
-
(2004)
Genome Research
, vol.14
, Issue.6
, pp. 1130-1136
-
-
Conrad, C.1
Erfle, H.2
Warnat, P.3
Daigle, N.4
Lorch, T.5
Ellenberg, J.6
Pepperkok, R.7
Eils, R.8
-
4
-
-
0142184341
-
Global analysis of protein localization in budding yeast
-
Huh WK, Falvo JV, Gerke LC, Carroll AS, Howson RW, Weissman JS, O'shea EK. Global analysis of protein localization in budding yeast. Nature 2003;425:686-691.
-
(2003)
Nature
, vol.425
, pp. 686-691
-
-
Huh, W.K.1
Falvo, J.V.2
Gerke, L.C.3
Carroll, A.S.4
Howson, R.W.5
Weissman, J.S.6
O'Shea, E.K.7
-
5
-
-
6344222240
-
High-content screening microscopy identifies novel proteins with a putative role in secretory membrane traffic
-
DOI 10.1101/gr.2658304
-
Starkuviene V, Liebel U, Simpson JC, Erfle H, Poustka A, Wiemann S, Pepperkok R. High-content screening microscopy identifies novel proteins with a putative role in secretory membrane traffic. Genome Res 2004;14:1948-1956. (Pubitemid 39386509)
-
(2004)
Genome Research
, vol.14
, Issue.10 A
, pp. 1948-1956
-
-
Starkuviene, V.1
Liebel, U.2
Simpson, J.C.3
Erfle, H.4
Poustka, A.5
Wiemann, S.6
Pepperkok, R.7
-
6
-
-
33646466731
-
Subcellular localization of mammalian type II membrane proteins
-
DOI 10.1111/j.1600-0854.2006.00407.x
-
Aturaliya RN, Fink JL, Davis MJ, Teasdale MS, Hanson KA, Miranda KC, Forrest AR, Grimmond SM, Suzuki H, Kanamori M, Kai C, Kawai J, Carninci P, Hayashizaki Y, Teasdale RD. Subcellular localization of mammalian type II membrane proteins. Traffic 2006;7:613-625. (Pubitemid 44026758)
-
(2006)
Traffic
, vol.7
, Issue.5
, pp. 613-625
-
-
Aturaliya, R.N.1
Fink, J.L.2
Davis, M.J.3
Teasdale, M.S.4
Hanson, K.A.5
Miranda, K.C.6
Forrest, A.R.R.7
Grimmond, S.M.8
Suzuki, H.9
Kanamori, M.10
Kai, C.11
Kawai, J.12
Carninci, P.13
Hayashizaki, Y.14
Teasdale, R.D.15
-
7
-
-
34249666037
-
Large-scale automated analysis of location patterns in randomly tagged 3T3 cells
-
DOI 10.1007/s10439-007-9254-5, Systems Biology, Bioinformatics, and Computational Biology
-
Garcia Osuna E, Hua J, Bateman NW, Zhao T, Berget PB, Murphy RF. Largescale automated analysis of location patterns in randomly tagged 3T3 cells. Ann Biomed Eng 2007;35:1081-1087. (Pubitemid 46828716)
-
(2007)
Annals of Biomedical Engineering
, vol.35
, Issue.6
, pp. 1081-1087
-
-
Osuna, E.G.1
Hua, J.2
Bateman, N.W.3
Zhao, T.4
Berget, P.B.5
Murphy, R.F.6
-
8
-
-
60849132182
-
Localization of gene products using a chromosomally tagged GFP-fusion library in the fission yeast Schizosaccharomyces pombe
-
Hayashi A, Da-Qiao D, Tsutsumi C, Chikashige Y, Masuda H, Haraguchi T, Hiraoka Y. Localization of gene products using a chromosomally tagged GFP-fusion library in the fission yeast Schizosaccharomyces pombe. Genes Cells 2009;14:217-225.
-
(2009)
Genes Cells
, vol.14
, pp. 217-225
-
-
Hayashi, A.1
Da-Qiao, D.2
Tsutsumi, C.3
Chikashige, Y.4
Masuda, H.5
Haraguchi, T.6
Hiraoka, Y.7
-
9
-
-
29244477844
-
A human protein atlas for normal and cancer tissues based on antibody proteomics
-
DOI 10.1074/mcp.M500279-MCP200
-
Uhlen M, Bjorling E, Agaton C, Szigyarto CA, Amini B, Andersen E, Andersson AC, Angelidou P, Asplund A, Asplund C, Berglund L, Bergstrom K, Brumer H, Cerjan D, Ekstrom M, Elobeid A, Eriksson C, Fagerberg L, Falk R, Fall J, Forsberg M, Bjorklund MG, Gumbel K, Halimi A, Hallin I, Hamsten C, Hansson M, Hedhammar M, Hercules G, Kampf C, Larsson K, Lindskog M, Lodewyckx W, Lund J, Lundeberg J, Magnusson K, Malm E, Nilsson P, Odling J, Oksvold P, Olsson I, Oster E, Ottosson J, Paavilainen L, Persson A, Rimini R, Rockberg J, Runeson M, Sivertsson A, Skollermo A, Steen J, Stenvall M, Sterky F, Stromberg S, Sundberg M, Tegel H, Tourle S, Wahlund E, Walden A, Wan J, Wernerus H, Westberg J, Wester K, Wrethagen U, Xu LL, Hober S, Ponten F. A human protein atlas for normal and cancer tissues based on antibody proteomics. Mol Cell Proteomics 2005;4:1920-1932. (Pubitemid 41830186)
-
(2005)
Molecular and Cellular Proteomics
, vol.4
, Issue.12
, pp. 1920-1932
-
-
Uhlen, M.1
Bjorling, E.2
Agaton, C.3
Szigyarto, C.A.-K.4
Amini, B.5
Andersen, E.6
Andersson, A.-C.7
Angelidou, P.8
Asplund, A.9
Asplund, C.10
Berglund, L.11
Bergstrom, K.12
Brumer, H.13
Cerjan, D.14
Ekstrom, M.15
Elobeid, A.16
Eriksson, C.17
Fagerberg, L.18
Falk, R.19
Fall, J.20
Forsberg, M.21
Bjorklund, M.G.22
Gumbel, K.23
Halimi, A.24
Hallin, I.25
Hamsten, C.26
Hansson, M.27
Hedhammar, M.28
Hercules, G.29
Kampf, C.30
Larsson, K.31
Lindskog, M.32
Lodewyckx, W.33
Lund, J.34
Lundeberg, J.35
Magnusson, K.36
Malm, E.37
Nilsson, P.38
Odling, J.39
Oksvold, P.40
Olsson, I.41
Oster, E.42
Ottosson, J.43
Paavilainen, L.44
Persson, A.45
Rimini, R.46
Rockberg, J.47
Runeson, M.48
Sivertsson, A.49
Skollermo, A.50
Steen, J.51
Stenvall, M.52
Sterky, F.53
Stromberg, S.54
Sundberg, M.55
Tegel, H.56
Tourle, S.57
Wahlund, E.58
Walden, A.59
Wan, J.60
Wernerus, H.61
Westberg, J.62
Wester, K.63
Wrethagen, U.64
Xu, L.L.65
Hober, S.66
Ponten, F.67
more..
-
10
-
-
34547830883
-
Automated image analysis of protein localization in budding yeast
-
DOI 10.1093/bioinformatics/btm206
-
Chen SC, Zhao T, Gordon GJ, Murphy RF. Automated image analysis of protein localization in budding yeast. Bioinformatics 2007;23:i66-i71. (Pubitemid 47244387)
-
(2007)
Bioinformatics
, vol.23
, Issue.13
-
-
Chen, S.-C.1
Zhao, T.2
Gordon, G.J.3
Murphy, R.F.4
-
12
-
-
33750606683
-
Morphological segmentation of yeast by image analysis
-
DOI 10.1016/j.imavis.2006.01.006, PII S0262885606000242
-
De Carvalho MAG, Lotufo RdA, Couprie M. Morphological segmentation of yeast by image analysis. Image Vision Computing 2007;25:34-39. (Pubitemid 44691982)
-
(2007)
Image and Vision Computing
, vol.25
, Issue.1
, pp. 34-39
-
-
De Carvalho, M.A.G.1
Lotufo, R.D.A.2
Couprie, M.3
-
13
-
-
50049097189
-
Image analysis algorithms for cell contour recognition in budding yeast
-
Kvarnstrom M, Logg K, Diez A, Bodvard K, Kall M. Image analysis algorithms for cell contour recognition in budding yeast. Opt Express 2008;16:12943-12957.
-
(2008)
Opt Express
, vol.16
, pp. 12943-12957
-
-
Kvarnstrom, M.1
Logg, K.2
Diez, A.3
Bodvard, K.4
Kall, M.5
-
14
-
-
23144437706
-
Data mining tools for the Saccharomyces cerevisiae morphological database
-
DOI 10.1093/nar/gki451
-
Saito TL, Sese J, Nakatani Y, Sano F, Yukawa M, Ohya Y, Morishita S. Data mining tools for the Saccharomyces cerevisiae morphological database. Nucleic Acids Res 2005;33:W753-7. (Pubitemid 44530023)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.WEB. SERV. ISS
-
-
Saito, T.L.1
Sese, J.2
Nakatani, Y.3
Sano, F.4
Yukawa, M.5
Ohya, Y.6
Morishita, S.7
-
15
-
-
34047114087
-
Extraction of the number of peroxisomes in yeast cells by automated image analysis
-
DOI 10.1109/IEMBS.2006.259890, 4028959, 28th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'06
-
Niemisto A, Selinummi J, Saleem R, Shmulevich I, Aitchison J, Yli-Harja O. Extraction of the number of peroxisomes in yeast cells by automated image analysis. Proc EMBS 2006;2353-2356. (Pubitemid 46520377)
-
(2006)
Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings
, pp. 2353-2356
-
-
Niemisto, A.1
Selinummi, J.2
Saleem, R.3
Shmulevich, I.4
Aitchison, J.5
Yli-Harja, O.6
-
16
-
-
33947355325
-
Single-cell quantification of molecules and rates using open-source microscope-based cytometry
-
DOI 10.1038/nmeth1008, PII NMETH1008
-
Gordon A, Colman-Lerner A, Chin TE, Benjamin KR, Yu RC, Brent R. Single- cell quantification of molecules and rates using open-source microscope-based cytometry. Nat Methods 2007;4:175-181. (Pubitemid 46454687)
-
(2007)
Nature Methods
, vol.4
, Issue.2
, pp. 175-181
-
-
Gordon, A.1
Colman-Lerner, A.2
Chin, T.E.3
Benjamin, K.R.4
Yu, R.C.5
Brent, R.6
-
17
-
-
60849101855
-
Systematic definition of protein constituents along the major polarization axis reveals an adaptive reuse of the polarization machinery in pheromone-treated budding yeast
-
Narayanaswamy R, Moradi EK, Niu W, Hart GT, Davis M, Mcgary KL, Ellington AD, Marcotte EM. Systematic definition of protein constituents along the major polarization axis reveals an adaptive reuse of the polarization machinery in pheromone-treated budding yeast. J Proteome Res 2009;8:6-19.
-
(2009)
J Proteome Res
, vol.8
, pp. 6-19
-
-
Narayanaswamy, R.1
Moradi, E.K.2
Niu, W.3
Hart, G.T.4
Davis, M.5
Mcgary, K.L.6
Ellington, A.D.7
Marcotte, E.M.8
-
18
-
-
60849129470
-
Imaging-based live cell yeast screen identifies novel factors involved in peroxisome assembly
-
Wolinski H, Petrovic U, Mattiazzi M, Petschnigg J, Heise B, Natter K, Kohlwein SD. Imaging-based live cell yeast screen identifies novel factors involved in peroxisome assembly. J Proteome Res 2009;8:20-27.
-
(2009)
J Proteome Res
, vol.8
, pp. 20-27
-
-
Wolinski, H.1
Petrovic, U.2
Mattiazzi, M.3
Petschnigg, J.4
Heise, B.5
Natter, K.6
Kohlwein, S.D.7
-
19
-
-
17144396362
-
Automated classification of subcellular patterns in multicell images without segmentation into single cells
-
2004 2nd IEEE International Symposium on Biomedical Imaging: Macro to Nano
-
Huang K, Murphy RF. Automated classification of subcellular patterns in multicell images without segmentation into single cells. Proc ISBI 2004;1139-1142. (Pubitemid 40514143)
-
(2004)
2004 2nd IEEE International Symposium on Biomedical Imaging: Macro to Nano
, vol.2
, pp. 1139-1142
-
-
Huang, K.1
Murphy, R.F.2
-
20
-
-
34548840588
-
Random subwindows and extremely randomized trees for image classification in cell biology
-
DOI 10.1186/1471-2121-8-S1-S2
-
Maree R, Geurts P, Wehenkel L. Random subwindows and extremely randomized trees for image classification in cell biology. BMC Cell Biol 2007;8(Suppl 1):S2. (Pubitemid 351837302)
-
(2007)
BMC Cell Biology
, vol.8
, Issue.SUPPL. 1
-
-
Maree, R.1
Geurts, P.2
Wehenkel, L.3
-
21
-
-
0041502491
-
Classifying images of materials: Achieving viewpoint and illumination independence
-
Varma M, Zisserman A. Classifying images of materials: Achieving viewpoint and illumination independence. Proc ECCV 2002;3:255-271.
-
(2002)
Proc ECCV
, vol.3
, pp. 255-271
-
-
Varma, M.1
Zisserman, A.2
-
25
-
-
33846580425
-
Local features and kernels for classification of texture and object categories: A comprehensive study
-
DOI 10.1007/s11263-006-9794-4
-
Zhang J, Marszalek M, Lazebnik S, Schmid C. Local features and kernels for classification of texture and object categories: A comprehensive study. Int J Comput Vision 2007;73:213-238. (Pubitemid 46181625)
-
(2007)
International Journal of Computer Vision
, vol.73
, Issue.2
, pp. 213-238
-
-
Zhang, J.1
Marszalek, M.2
Lazebnik, S.3
Schmid, C.4
-
26
-
-
3042535216
-
Distinctiveimage features from scale-invariant keypoints
-
Lowe DG. Distinctiveimage features from scale-invariant keypoints. Int J Comput Vision 2004;60:91-110.
-
(2004)
Int J Comput Vision
, vol.60
, pp. 91-110
-
-
Lowe, D.G.1
-
29
-
-
0036505670
-
A comparison of methods for multiclass support vector machines
-
DOI 10.1109/72.991427, PII S1045922702018052
-
Hsu C-W, Lin C-J. A comparison of methods for multi-class support vector machines. IEEE Trans Neural Networks 2002;13:415-425. (Pubitemid 34475042)
-
(2002)
IEEE Transactions on Neural Networks
, vol.13
, Issue.2
, pp. 415-425
-
-
Hsu, C.-W.1
Lin, C.-J.2
|