-
1
-
-
0026495432
-
Direct mechanical measurements of the elasticity of single DNA molecules by using magnetic beads
-
Smith SB, Finzi L, Bustamante C (1992) Direct mechanical measurements of the elasticity of single DNA molecules by using magnetic beads. Science 258:1122-1126.
-
(1992)
Science
, vol.258
, pp. 1122-1126
-
-
Smith, S.B.1
Finzi, L.2
Bustamante, C.3
-
2
-
-
0030024985
-
Overstretching B-DNA: The elastic response of individual double-stranded and single-stranded DNB molecules
-
Smith SB, Cui Y, Bustamante C (1996) Overstretching B-DNA: The elastic response of individual double-stranded and single-stranded DNA molecules. Science 271:795-799. (Pubitemid 26058930)
-
(1996)
Science
, vol.271
, Issue.5250
, pp. 795-799
-
-
Smith, S.B.1
Cui, Y.2
Bustamante, C.3
-
3
-
-
0030064676
-
DNA: An extensible molecule
-
Cluzel P, et al. (1996) DNA: An extensible molecule. Science 271:792-794.
-
(1996)
Science
, vol.271
, pp. 792-794
-
-
Cluzel, P.1
-
4
-
-
18344386476
-
Structural transitions of a twisted and stretched DNA molecule
-
Léger JF, et al. (1999) Structural transitions of a twisted and stretched DNA molecule. Phys Rev Lett 83:1066.
-
(1999)
Phys Rev Lett
, vol.83
, pp. 1066
-
-
Léger, J.F.1
-
5
-
-
0041305824
-
Structural transitions and elasticity from torque measurements on DNA
-
DOI 10.1038/nature01810
-
Bryant Z, et al. (2003) Structural transitions and elasticity from torque measurements on DNA. Nature 424:338-341. (Pubitemid 36899378)
-
(2003)
Nature
, vol.424
, Issue.6946
, pp. 338-341
-
-
Bryant, Z.1
Stone, M.D.2
Gore, J.3
Smith, S.B.4
Cozzarelli, N.R.5
Bustamante, C.6
-
6
-
-
0038497542
-
Molecular structure of nucleic acids - A structure for deoxyribose nucleic acid
-
Watson JD, Crick FHC (1953) Molecular structure of nucleic acids - a structure for deoxyribose nucleic acid. Nature 171:737-738.
-
(1953)
Nature
, vol.171
, pp. 737-738
-
-
Watson, J.D.1
Crick, F.H.C.2
-
7
-
-
0035144565
-
Effect of pH on the overstretching transition of double-stranded DNA: Evidence of force-induced DNA melting
-
Williams MC, Wenner JR, Rouzina L, Bloomfield VA (2001) Effect of pH on the overstretching transition of double-stranded DNA: Evidence of force-induced DNA melting. Biophys J 80:874-881.
-
(2001)
Biophys J
, vol.80
, pp. 874-881
-
-
Williams, M.C.1
Wenner, J.R.2
Rouzina, L.3
Bloomfield, V.A.4
-
8
-
-
0036106380
-
Salt dependence of the elasticity and overstretching transition of single DNA molecules
-
Wenner JR, Williams MC, Rouzina I, Bloomfield VA (2002) Salt dependence of the elasticity and overstretching transition of single DNA molecules. Biophys J 82:3160-3169. (Pubitemid 34547660)
-
(2002)
Biophysical Journal
, vol.82
, Issue.6
, pp. 3160-3169
-
-
Wenner, J.R.1
Williams, M.C.2
Rouzina, I.3
Bloomfield, V.A.4
-
9
-
-
31144451483
-
Structure and energy of a DNA dodecamer under tensile load
-
Piana S (2005) Structure and energy of a DNA dodecamer under tensile load. Nucleic Acids Res 33:7029-7038.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 7029-7038
-
-
Piana, S.1
-
10
-
-
0035146646
-
Force-induced melting of the DNA double helix 1. Thermodynamic analysis
-
Rouzina I, Bloomfield VA (2001) Force-induced melting of the DNA double helix. 1. Thermodynamic analysis. Biophys J 80:882-893. (Pubitemid 32128339)
-
(2001)
Biophysical Journal
, vol.80
, Issue.2
, pp. 882-893
-
-
Rouzina, I.1
Bloomfield, V.A.2
-
11
-
-
0035144566
-
Force-induced melting of the DNA double helix. 2. Effect of solution conditions
-
Rouzina I, Bloomfield VA (2001) Force-induced melting of the DNA double helix. 2. Effect of solution conditions. Biophys J 80:894-900. (Pubitemid 32128340)
-
(2001)
Biophysical Journal
, vol.80
, Issue.2
, pp. 894-900
-
-
Rouzina, I.1
Bloomfield, V.A.2
-
12
-
-
0035072057
-
Entropy and heat capacity of DNA melting from temperature dependence of single molecule stretching
-
Williams MC, Wenner JR, Rouzina I, Bloomfield VA (2001) Entropy and heat capacity of DNA melting from temperature dependence of single molecule stretching. Biophys J 80:1932-1939. (Pubitemid 32281008)
-
(2001)
Biophysical Journal
, vol.80
, Issue.4
, pp. 1932-1939
-
-
Williams, M.C.1
Wenner, J.R.2
Rouzina, I.3
Bloomfield, V.A.4
-
13
-
-
1042298812
-
Mechanical Measurement of Single-molecule Binding Rates: Kinetics of DNA Helix-destabilization by T4 Gene 32 Protein
-
DOI 10.1016/j.jmb.2003.12.025
-
Pant K, Karpel RL, Rouzina I, Williams MC (2004) Mechanical measurement of single-molecule binding rates: Kinetics of DNA helix-destabilization by T4 gene 32 protein. J Mol Biol 336:851-870. (Pubitemid 38201536)
-
(2004)
Journal of Molecular Biology
, vol.336
, Issue.4
, pp. 851-870
-
-
Pant, K.1
Karpel, R.L.2
Rouzina, I.3
Williams, M.C.4
-
14
-
-
0344406718
-
Kinetic regulation of single DNA molecule denaturation by T4 gene 32 protein structural domains
-
DOI 10.1016/S0022-2836(03)00153-0
-
Pant K, Karpel RL, Williams MC (2003) Kinetic regulation of single DNA molecule denaturation by T4 gene 32 protein structural D÷omains. J Mol Biol 327:571-578. (Pubitemid 36299064)
-
(2003)
Journal of Molecular Biology
, vol.327
, Issue.3
, pp. 571-578
-
-
Pant, K.1
Karpel, R.L.2
Williams, M.C.3
-
15
-
-
51049121185
-
DNA overstretching in the presence of glyoxal: Structural evidence of force-induced DNA melting
-
Shokri L, McCauley MJ, Rouzina I, Williams MC (2008) DNA overstretching in the presence of glyoxal: structural evidence of force-induced DNA melting. Biophys J 95:1248-1255.
-
(2008)
Biophys J
, vol.95
, pp. 1248-1255
-
-
Shokri, L.1
McCauley, M.J.2
Rouzina, I.3
Williams, M.C.4
-
16
-
-
0032919143
-
Sequence-dependent mechanics of single DNA molecules
-
DOI 10.1038/7582
-
Rief M, Clausen-Schaumann H, Gaub HE (1999) Sequence-dependent mechanics of single DNA molecules. Nat Struct Biol 6:346-349. (Pubitemid 29166483)
-
(1999)
Nature Structural Biology
, vol.6
, Issue.4
, pp. 346-349
-
-
Rief, M.1
Clausen-Schaumann, H.2
Gaub, H.E.3
-
17
-
-
42749104291
-
Overstretching and force-driven strand separation of double-helix DNA
-
Cocco S, et al. (2004) Overstretching and force-driven strand separation of double-helix DNA. Phys Rev E 70:011910.
-
(2004)
Phys Rev E
, vol.70
, pp. 011910
-
-
Cocco, S.1
-
18
-
-
59649116344
-
Counting RAD51 proteins disassembling from nucleoprotein filaments under tension
-
van Mameren J, et al. (2009) Counting RAD51 proteins disassembling from nucleoprotein filaments under tension. Nature 457:745-748.
-
(2009)
Nature
, vol.457
, pp. 745-748
-
-
Van Mameren, J.1
-
19
-
-
0026696234
-
Stable fluorescent complexes of double-stranded DNA with bis-intercalating asymmetric cyanine dyes-properties and applications
-
Rye HS, et al. (1992) Stable fluorescent complexes of double-stranded DNA with bis-intercalating asymmetric cyanine dyes-properties and applications. Nucleic Acids Res 20:2803-2812.
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 2803-2812
-
-
Rye, H.S.1
-
20
-
-
28844463534
-
Mapping the phase diagram of single DNA molecule force-induced melting in the presence of ethidium
-
Vladescu ID, McCauley MJ, Rouzina I, Williams MC (2005) Mapping the phase diagram of single DNA molecule force-induced melting in the presence of ethidium. Phys Rev Lett 95:158102.
-
(2005)
Phys Rev Lett
, vol.95
, pp. 158102
-
-
Vladescu, I.D.1
McCauley, M.J.2
Rouzina, I.3
Williams, M.C.4
-
21
-
-
0022423183
-
Characterization of amitochondrial protein-binding to single-stranded-DNA
-
Mignotte B, Barat M, Mounolou JC (1985) Characterization of amitochondrial protein-binding to single-stranded-DNA. Nucleic Acids Res 13:1703-1716.
-
(1985)
Nucleic Acids Res
, vol.13
, pp. 1703-1716
-
-
Mignotte, B.1
Barat, M.2
Mounolou, J.C.3
-
22
-
-
0014963741
-
T4 bacteriophage gene 32: A structural protein in replication and recombination of DNA
-
Alberts BM, Frey L (1970) T4 bacteriophage gene 32: A structural protein in replication and recombination of DNA. Nature 227:1313-1318.
-
(1970)
Nature
, vol.227
, pp. 1313-1318
-
-
Alberts, B.M.1
Frey, L.2
-
24
-
-
0031023811
-
Crystal structure of human mitochondrial single-stranded DNA binding protein at 2.4 angstrom resolution
-
DOI 10.1038/nsb0297-153
-
Yang C, Curth U, Urbanke C, Kang CH (1997) Crystal structure of human mitochondrial single stranded DNA binding protein at 2.4 angstrom resolution. Nat Struct Biol 4:153-157. (Pubitemid 27066391)
-
(1997)
Nature Structural Biology
, vol.4
, Issue.2
, pp. 153-157
-
-
Yang, C.1
Curth, U.2
Urbanke, C.3
Kang, C.4
-
25
-
-
0031030449
-
Structure of the single-stranded-DNA-binding domain of replication protein a bound to DNA
-
DOI 10.1038/385176a0
-
Bochkarev A, Pfuetzner RA, Edwards AM, Frappier L (1997) Structure of the single-stranded-DNA-binding domain of replication protein A bound to DNA. Nature 385:176-181. (Pubitemid 27034221)
-
(1997)
Nature
, vol.385
, Issue.6612
, pp. 176-181
-
-
Bochkarev, A.1
Pfuetzner, R.A.2
Edwards, A.M.3
Frappier, L.4
-
26
-
-
63149185297
-
Spectroscopic studies of position-specific DNA "breathing" fluctuations at replication forks and primer-template junctions
-
Jose D, Datta K, Johnson NP, von Hippel PH (2009) Spectroscopic studies of position-specific DNA "breathing" fluctuations at replication forks and primer-template junctions. Proc Nat Acad Sci USA 106:4231-4236.
-
(2009)
Proc Nat Acad Sci USA
, vol.106
, pp. 4231-4236
-
-
Jose, D.1
Datta, K.2
Johnson, N.P.3
Von Hippel, P.H.4
-
27
-
-
0031739436
-
An electrostatic model of B-DNA for its stability against unwinding
-
Stigter D (1998) An electrostatic model of B-DNA for its stability against unwinding. Biophys Chem 75:229-233.
-
(1998)
Biophys Chem
, vol.75
, pp. 229-233
-
-
Stigter, D.1
-
28
-
-
2342485985
-
Bubble nucleation and cooperativity in DNA melting
-
DOI 10.1016/j.jmb.2004.02.072, PII S0022283604002839
-
Zeng Y, Montrichok A, Zocchi G (2004) Bubble nucleation and cooperativity in DNA melting. J Mol Biol 339:67-75. (Pubitemid 38569690)
-
(2004)
Journal of Molecular Biology
, vol.339
, Issue.1
, pp. 67-75
-
-
Zeng, Y.1
Montrichok, A.2
Zocchi, G.3
-
29
-
-
0001767132
-
Molecular stick-slip motion revealed by opening DNA with piconewton forces
-
Bockelmann U, Essevaz-Roulet B, Heslot F (1997) Molecular stick-slip motion revealed by opening DNA with piconewton forces. Phys Rev Lett 79:4489-4492. (Pubitemid 127645256)
-
(1997)
Physical Review Letters
, vol.79
, Issue.22
, pp. 4489-4492
-
-
Bockelmann, U.1
Essevaz-Roulet, B.2
Heslot, F.3
-
30
-
-
36749025645
-
Visualizing single DNA-bound proteins using DNA as a scanning probe
-
DOI 10.1038/nmeth1126, PII NMETH1126
-
Noom MC, van den Broek B, van Mameren J, Wuite GJL (2007) Visualizing single DNA-bound proteins using DNA as a scanning probe. Nat Methods 4:1031-1036. (Pubitemid 350201775)
-
(2007)
Nature Methods
, vol.4
, Issue.12
, pp. 1031-1036
-
-
Noom, M.C.1
Van Den Broek, B.2
Van Mameren, J.3
Wuite, G.J.L.4
-
31
-
-
19444384194
-
DNA-tension dependence of restriction enzyme activity reveals mechanochemical properties of the reaction pathway
-
DOI 10.1093/nar/gki565
-
van den Broek B, Noom MC, Wuite GJL (2005) DNA-tension dependence of restriction enzyme activity reveals mechanochemical properties of the reaction pathway. Nucleic Acids Res 33:2676-2684. (Pubitemid 41511285)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.8
, pp. 2676-2684
-
-
Van Den Broek, B.1
Noom, M.C.2
Wuite, G.J.L.3
-
32
-
-
1542677230
-
TWINKLE has 5′-> 3′ DNA helicase activity and is specifically stimulated by mitochondrial single-stranded DNA-binding protein
-
DOI 10.1074/jbc.M306981200
-
Korhonen JA, Gaspari M, Falkenberg M (2003) TWINKLE has 5′-> 3′ DNA helicase activity and is specifically stimulated by mitochondrial single-stranded DNA-binding protein. J Biol Chem 278:48627-48632. (Pubitemid 41079501)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.49
, pp. 48627-48632
-
-
Korhonen, J.A.1
Gaspari, M.2
Falkenberg, M.3
-
33
-
-
0028245269
-
Recombinant replication protein A: Expression, complex formation, and functional characterization
-
[published erratum appears in J Biol Chem 1994 Jun 10;269(23):16519]
-
Henricksen LA, Umbricht CB, Wold MS (1994) Recombinant replication protein A: Expression, complex formation, and functional characterization [published erratum appears in J Biol Chem 1994 Jun 10;269(23):16519]. J Biol Chem 269:11121-11132.
-
(1994)
J Biol Chem
, vol.269
, pp. 11121-11132
-
-
Henricksen, L.A.1
Umbricht, C.B.2
Wold, M.S.3
-
34
-
-
0019376372
-
The interaction of intercalating drugs with nucleic-acids
-
Berman HM, Young PR (1981) The interaction of intercalating drugs with nucleic-acids. Annu Rev Biophys Bio 10:87-114.
-
(1981)
Annu Rev Biophys Bio
, vol.10
, pp. 87-114
-
-
Berman, H.M.1
Young, P.R.2
|