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Volumn , Issue , 2009, Pages

Parallel short sequence mapping for high throughput genome sequencing

Author keywords

[No Author keywords available]

Indexed keywords

ACCURATE ESTIMATION; COST MODELS; EXECUTION TIME; GENOME SEQUENCING; HIGH THROUGHPUT; LARGE DATASETS; LARGE-SCALE DATASETS; MAPPING PROBLEM; MASSIVE DATA; PARALLEL EXECUTION TIME; PARALLEL METHOD; PARALLELIZATIONS; REAL DATA SETS; SELECTION FUNCTION; SHORT SEQUENCES;

EID: 70450091111     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/IPDPS.2009.5161075     Document Type: Conference Paper
Times cited : (13)

References (20)
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    • Applied Biosystems SOLiD system. http: //marketing.appliedbiosystems.com/ mk/get/SOLID KNOWLEDGE LANDING.
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  • 8
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    • Patternhunter II: Highly sensitive and fast homology search
    • September
    • M. Li, B. Ma, D. Kisman, and J. Tromp. Patternhunter II: highly sensitive and fast homology search. J Bioinform Comput Biol, 2(3):417-439, September 2004.
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    • Li, M.1    Ma, B.2    Kisman, D.3    Tromp, J.4
  • 9
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    • 43349088826 scopus 로고    scopus 로고
    • xMAN: Extreme MApping of oligoNucleotides
    • W. Li, J. Carroll, M. Brown, and S. X. Liu. xMAN: extreme MApping of oligoNucleotides. BMC Genomics, 9(Suppl 1), 2008.
    • (2008) BMC Genomics , vol.9 , Issue.SUPPL. 1
    • Li, W.1    Carroll, J.2    Brown, M.3    Liu, S.X.4
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    • Initial sequencing and analysis of the human genome
    • February
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    • Morgan, M.J.1
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    • SSAHA: A fast search method for large DNA databases
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    • (2001) Genome Res , vol.11 , Issue.10 , pp. 1725-1729
    • Ning, Z.1    Cox, A.J.2    Mullikin, J.C.3
  • 17
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    • Identification of common molecular subsequences
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    • M. Stromberg and G. Marth. MOSAIK: A reference-guided assembler for next-generation sequence data. Manuscript in preparation. http://bioinformatics. bc.edu/marthlab/Mosaik, 2009.
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    • Fast flexible mapping of Applied Biosystems SOLiD short sequence reads
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    • Z. Zhang and et. al. Fast flexible mapping of Applied Biosystems SOLiD short sequence reads. Manuscript in preparation, 2009.
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    • Zhang, Z.1    and et., al.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.