A surface registration method for quantification of intraoperative brain deformations in image-guided neurosurgery

IEEE Transactions on Information Technology in Biomedicine

Volumn 13, Issue 6, 2009, Pages 976-983

  Paul, Perrine ^a,b,c   Morandi, Xavier ^a,b,d   Jannin, Pierre ^a,b  

^a INRIA   (France)

^b UNIVERSITÉ DE RENNES 1   (France)

^c NATIONAL UNIVERSITY OF IRELAND   (Ireland)

^d PONTCHAILLOU UNIVERSITY HOSPITAL   (France)

Author keywords

Image guided neurosurgery (IGNS); Intraoperative brain surface deformation; Surface registration; Video analysis

Indexed keywords

3D RECONSTRUCTION; ANATOMICAL LANDMARKS; BRAIN DEFORMATIONS; BRAIN VOLUME; EUCLIDEAN DISTANCE; FLEXIBLE SURFACES; GLOBAL METHODS; IMAGE INTENSITIES; IMAGE-GUIDED NEUROSURGERY; IMAGE-GUIDED NEUROSURGERY (IGNS); INTRA-OPERATIVE; INTRAOPERATIVE BRAIN SURFACE DEFORMATION; LASER RANGE; NEURONAVIGATION SYSTEMS; PERFORMANCE EVALUATION; POINT CLOUD; PRIOR KNOWLEDGE; RIGID REGISTRATION; SURFACE REGISTRATION; SURGICAL PROCEDURES; TEMPORAL RESOLUTION; THREE-TERM; VIDEO ANALYSIS; VIDEO FLOW;

APPROXIMATION THEORY; DEFORMATION; IMAGE PROCESSING; SURFACE MEASUREMENT; THREE DIMENSIONAL; TWO DIMENSIONAL;

NEUROSURGERY;

ARTICLE; BIOLOGICAL MODEL; BRAIN; COMPUTER ASSISTED SURGERY; FEMALE; HISTOLOGY; HUMAN; IMAGE PROCESSING; IMAGE QUALITY; MALE; METHODOLOGY; NEUROSURGERY; NUCLEAR MAGNETIC RESONANCE IMAGING; VIDEORECORDING;

BRAIN; FEMALE; HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; MAGNETIC RESONANCE IMAGING; MALE; MODELS, NEUROLOGICAL; NEUROSURGICAL PROCEDURES; PHANTOMS, IMAGING; SURGERY, COMPUTER-ASSISTED; VIDEO RECORDING;

EID: 70449586849     PISSN: 10897771     EISSN: None     Source Type: Journal    
DOI: 10.1109/TITB.2009.2025373     Document Type: Article

References (36)

1. P. Grunert, K. Darabi, J. Espinosa, and R. Filippi, "Computer-aided navigation in neurosurgery," Neurosurg. Rev., vol.26, pp. 73-99, May 2003.
2. J. Cohen-Adad, P. Paul, X. Morandi, and P. Jannin, "Knowledge modeling in image guided neurosurgery: Application in understanding intraoperative brain shift," in Proc. SPIE Med. Imag. 2006: Vis., Image-Guided Procedures, Display, San Diego, CA, vol.6141, pp. 709-716.
3. T. Hartkens, D. L. G. Hill, A. D. Castellano-Smith, D. J. Hawkes, C. R. Maurer, A. J.Martin,W. A. Hall, H. Liu, and C. L. Truwit, "Measurement and analysis of brain deformation during neurosurgery," IEEE Trans. Med. Imag., vol.22, no.1, pp. 82-92, Jan. 2003.
4. M.M. J. Letteboer, P.W. A.Willems, M. A. Viergever, andW. J. Niessen, "Brain shift estimation in image-guided neurosurgery using 3-D ultrasound," IEEE Trans. Biomed. Eng., vol.52, no.2, pp. 268-276, Feb. 2005.
5. A. P. King, J. M. Blackall, G. P. Penney, P. J. Edwards, D. L. G. Hill, and D. J. Hawkes, "Bayesian estimation of intra-operative deformation for image-guided surgery using 3-D ultrasound," in Proc. MICCAI 2000, Lect. Notes Comput. Sci. 1935, Pittsburg, PA, 2009, pp. 588-597.
6. R. M. Comeau, A. F. Sadikot, A. Fenster, and T. M. Peters, "Intraoperative ultrasound for guidance and tissue shift correction in image-guided neurosurgery," Med. Phys., vol.27, pp. 787-800, Apr. 2000.
7. T. A. N. Hernes, F. Lindseth, T. Selbekk, A.Wollf, O. V. Solberg, E. Harg, O. M. Rygh, G. A. Tangen, I. Rasmussen, S. Augdal, F. Couweleers, andG. Unsgaard, "Computer-assisted 3D ultrasound-guided neurosurgery: Technological contributions, including multimodal registration and advanced display, demonstrating future perspectives," Int. J. Med. Robot., vol.2, pp. 45-59, Mar. 2006.
8. X. Pennec, P. Cachier, and N. Ayache, "Tracking brain deformations in time sequences of 3D US images," Pattern Recognit. Lett. Spec. Issue: Ultrason. Image Process. Anal., vol. 24, pp. 801-813, Feb. 2003.
9. M. I. Miga, T. K. Sinha, D. M. Cash, R. L. Galoway, and R. J. Weil, "Cortical surface registration for image-guided neurosurgery using laserrange scanning," IEEE Trans. Med. Imag., vol.22, no.8, pp. 973-985, Aug. 2003.
10. S. Nakajima, H. Atsumi, R. Kikinis, T. M. Moriarty, D. C. Metcalf, F. A. Jolesz, and P. M. Black, "Use of cortical surface vessel registration for image-guided neurosurgery," Neurosurgery, vol.40, pp. 1201-1208, Jun. 1997.
11. T. K. Sinha, B. M. Dawant, V. Duay, D. M. Cash, R. J. Weil, R. C. Thompson, K. D. Weaver, and M. I. Miga, "A method to track cortical surface deformations using a laser range scanner," IEEE Trans. Med. Imag., vol.24, no.6, pp. 767-781, Jun. 2005.
12. H. Sun, D. W. Roberts, H. Farid, Z. Wu, A. Hartov, and K. D. Paulsen, "Cortical surface tracking using a stereoscopic operating microscope," Neurosurg. Oper. Neurosurg. Suppl., vol.56, pp. 86-97, Jan. 2005.
13. O. Skrinjar, A. Nabavi, and J. Duncan, "Model-driven brain shift compensation," Med. Image Anal., vol.6, pp. 361-373, Dec. 2002.
14. D. W. Roberts, M. I. Miga, A. Hartov, S. Eisner, J. M. Lemery, F. E. Kennedy, and K. D. Paulsen, "Intraoperatively updated neuroimaging using brain modeling and sparse data," Neurosurgery, vol.45, pp. 1199- 1207, Nov. 1999.
15. O. Clatz, H. Delingette, I.-F. Talos, A. J. Golby, R. Kikinis, F. A. Jolesz, N. Ayache, and S. K. Warfield, "Robust non rigid registration to capture brain shift from intraoperative MRI," IEEE Trans. Med. Imag., vol.24, no.11, pp. 1417-1427, Nov. 2005.
16. A. Nabavi, P. M. Black, D. T. Gering, C. F. Westin, V. Mehta, R. S. Pergolizzi, M. Ferrant, S. K. Warfield, N. Hata, R. B. Schwartz, W. M. Wells, R. Kikinis, and F. A. Jolesz, "Serial intraoperative MR imaging of brain shift," Neurosurgery, vol.48, pp. 787-798, Apr. 2001.
17. C. Nimsky, O. Ganslandt, S. Cerny, P. Hastreiter, G. Greiner, and R. Fahlbusch, "Quantification of, visualization of, and compensation for brain shift using intraoperative magnetic resonance imaging," Neurosurgery, vol.47, pp. 1070-1079, Nov. 2000.
18. A. Hagemann, K. Rohr, and H. S. Stiehl, "Coupling of fluid and elastic models for biomechanical simulations of brain deformations using FEM," Med. Image Anal., vol.6, pp. 375-388, Dec. 2002.
19. K. E. Lunn, K. D. Paulsen, D. R. Lynch, D. W. Roberts, F. E. Kennedy, and A. Hartov, "Assimilating intraoperative data with brain shiftmodeling using the adjoint equations," Med. Image Anal., vol.9, pp. 281-293, Jun. 2005.
20. M. I. Miga, D. W. Roberts, F. E. Kennedy, L. A. Platenik, A. Hartov, K. E. Lunn, and K. D. Paulsen, "Modeling of retraction and resection for intraoperative updating of images," Neurosurgery, vol.49, pp. 75-85, Jul. 2001.
21. M. I. Miga, T. K. Sinha, and D. M. Cash, "Techniques to correct for soft tissue deformations during image-guided brain surgery," in Biomechanics Applied to Computer Assisted Surgery, 1st ed. Y. Payan, Ed. Trivandrum, India: Research Signpost, 2005, pp. 153-177.
22. C. Davatzikos, D. Shen, M. Ashraf, and S. K. Kyriacou, "A framework for predictive modeling of anatomical deformation," IEEE Trans. Med. Imag., vol.20, no.8, pp. 836-843, Aug. 2001.
23. P. Jannin, X. Morandi, O. J. Fleig, E. Le Rumeur, P. Toulouse, B. Gibaud, and J.-M. Scarabin, "Integration of sulcal and functional information for multimodal neuronavigation," J. Neurosurg., vol.96, pp. 713-723, Apr. 2002.
24. P. Dumpuri, R. C. Thompson, B. M. Dawant, A. Cao, and M. I. Miga, "An atlas-based method to compensate for brain shift: Preliminary results," Med. Image Anal., vol.11, pp. 128-145, Apr. 2007.
25. P. Paul, O. J. Fleig, and P. Jannin, "Augmented virtuality based on stereoscopic reconstruction inmultimodal image-guided neurosurgery: Methods and performance evaluation," IEEE Trans. Med. Imag., vol.24, no.11, pp. 1500-1511, Nov. 2005.
26. A. Cao, R. C. Thompson, P. Dumpuri, B. M. Dawant, R. L. Galloway, S. Ding, and M. I. Miga, "Laser range scanning for image-guided neurosurgery: Investigation of image-to-physical space registrations," Med. Phys., vol.35, pp. 1593-1605, Apr. 2008.
27. C. Harris and M. Stephens, "A combined corner and edge detector," in Proc. 4th Alvey Vis. Conf., Manchester, U.K., 1988, pp. 147-151.
28. E. Arnaud, E. Memin, and B. Cernuschi-Fras, "Conditional filters for image sequence-based tracking-Application to point tracking," IEEE Trans. Image Process., vol.14, no.1, pp. 63-79, Jan. 2005.
29. B. D. O. Anderson and J. B. Moore, Optimal Filtering. Englewood Cliffs, NJ: Prentice-Hall, 1979.
30. F. Bookstein, "Principal warps: Thin-plate splines and the decomposition of deformations," IEEE Trans. Pattern Anal. Mach. Intell., vol.11, no.6, pp. 567-585, Jun. 1989.
31. P. Jannin, M. Raimbault, X. Morandi, L. Riffaud, and B. Gibaud, "Model of surgical procedures for multimodal image-guided surgery," Comput. Aided Surg., vol.8, pp. 98-106, Mar. 2003.
32. W. H. Press, S. A. Teukolsky,W. T. Vetterling, and B. P. Flannery, Numerical Recipes in C-The Art of Scientific Computing. Cambridge, U.K.: Cambridge Univ. Press, 1992, pp. 683-688.
33. P. Jannin, C. Grova, and C. R. Maurer, "Model for defining and reporting reference-based validation protocols in medical image processing," Int. J. Comput. Assisted Radiol. Surg., vol.1, pp. 63-73, Aug. 2006.
34. I. Reinertsen and D. L. Collins, "A realistic phantom for brain-shift simulation," Med. Phys., vol.33, pp. 3234-3240, Sep. 2006.
35. C. Barillot, P. Couṕe, O. El Ganaoui, B. Gibaud, P. Hellier, P. Jannin, P. Paul, S. Prima, N. Wiest-Daessĺe, and X. Morandi, "Image guidance in neurosurgical procedures, the Visages point of view," in Proc. IEEE Int. Symp. Biomed. Imag.: From Nano Macro ISBI 2007, Washington, DC, pp. 1056-1059.
36. T. Paleologos,O.Wadley, N. Kitchen, and C. Thomas, "Clinical utility and cost-effectiveness of interactive image-guided craniotomy: Clinical comparison between conventional and image-guided meningioma surgery," Neurosurgery, vol.47, pp. 40-48, Jul. 2000.