-
1
-
-
0035999379
-
Genes for two mitochondrial ribosomal proteins in flowering plants are derived from their chloroplast or cytosolic counterparts
-
DOI 10.1105/tpc.010483
-
KL Adams DO Daley J Whelan JD Palmer 2002 Genes for two mitochondrial ribosomal proteins in flowering plants are derived from their chloroplast or cytosolic counterparts Plant Cell 14 931 943 10.1105/tpc.010483 1:CAS:528:DC%2BD38XjsFWktrk%3D 11971146 (Pubitemid 34519612)
-
(2002)
Plant Cell
, vol.14
, Issue.4
, pp. 931-943
-
-
Adams, K.L.1
Daley, D.O.2
Whelan, J.3
Palmer, J.D.4
-
2
-
-
10644271631
-
Archaeal genetics - The third way
-
DOI 10.1038/nrg1504
-
T Allers M Mevarech 2005 Archaeal genetics-the third way Nat Rev Genet 6 58 73 10.1038/nrg1504 1:CAS:528:DC%2BD2MXlvVGl 15630422 (Pubitemid 39657898)
-
(2005)
Nature Reviews Genetics
, vol.6
, Issue.1
, pp. 58-73
-
-
Allers, T.1
Mevarech, M.2
-
4
-
-
0030018116
-
Physical and genetic map of the mitochondrial genome of Cryphonectria parasitica Ep155
-
DOI 10.1007/s002940050097
-
JA Bell CB Monteiro-Vitorello G Hausner DW Fulbright H Bertrand 1996 Physical and genetic map of the mitochondrial genome of Cryphonectria parasitica Ep155 Curr Genet 30 34 43 10.1007/s002940050097 1:CAS:528:DyaK28Xkt1GrsLs%3D 8662207 (Pubitemid 26257610)
-
(1996)
Current Genetics
, vol.30
, Issue.1
, pp. 34-43
-
-
Bell, J.A.1
Monteiro-Vitorello, C.B.2
Hausner, G.3
Fulbright, D.W.4
Bertrand, H.5
-
5
-
-
34247575099
-
Research coordination networks: A phylogeny for kingdom fungi (deep hypha)
-
10.3852/mycologia.98.6.829 17486960
-
M Blackwell DS Hibbett JW Taylor JW Spatafora 2006 Research coordination networks: a phylogeny for kingdom fungi (deep hypha) Mycologia 98 829 837 10.3852/mycologia.98.6.829 17486960
-
(2006)
Mycologia
, vol.98
, pp. 829-837
-
-
Blackwell, M.1
Hibbett, D.S.2
Taylor, J.W.3
Spatafora, J.W.4
-
6
-
-
33244495781
-
Comparative analysis of bacterial-origin genes for plant mitochondrial ribosomal proteins
-
DOI 10.1093/molbev/msj080
-
L Bonen S Calixte 2006 Comparative analysis of bacterial-origin genes for plant mitochondrial ribosomal proteins Mol Biol Evol 23 701 712 10.1093/molbev/msj080 1:CAS:528:DC%2BD28XitVags7g%3D 16368778 (Pubitemid 43278282)
-
(2006)
Molecular Biology and Evolution
, vol.23
, Issue.3
, pp. 701-712
-
-
Bonen, L.1
Calixte, S.2
-
7
-
-
0034255666
-
A novel motif for identifying Rps3 homologs in fungal mitochondrial genomes
-
DOI 10.1016/S0968-0004(00)01612-1, PII S0968000400016121
-
CE Bullerwell G Burger BF Lang 2000 A novel motif for identifying rps3 homologs in fungal mitochondrial genomes Trends Biochem Sci 25 363 365 10.1016/S0968-0004(00)01612-1 1:CAS:528:DC%2BD3cXlsVOqsb4%3D 10916154 (Pubitemid 30497240)
-
(2000)
Trends in Biochemical Sciences
, vol.25
, Issue.8
, pp. 363-365
-
-
Bullerwell, C.E.1
Burger, G.2
Lang, B.F.3
-
8
-
-
0037444274
-
Evolution of monoblepharidalean fungi based on complete mitochondrial genome sequences
-
DOI 10.1093/nar/gkg264
-
CE Bullerwell L Forget BF Lang 2003 Evolution of monoblepharidalean fungi based on complete mitochondrial genome sequences Nucleic Acids Res 31 1614 1623 10.1093/nar/gkg264 1:CAS:528:DC%2BD3sXit1yksb4%3D 12626702 (Pubitemid 36342253)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.6
, pp. 1614-1623
-
-
Bullerwell, C.E.1
Forget, L.2
Lang, B.F.3
-
9
-
-
0037440104
-
A comparison of three fission yeast mitochondrial genomes
-
DOI 10.1093/nar/gkg134
-
CE Bullerwell J Leigh L Forget BF Lang 2003 A comparison of three fission yeast mitochondrial genomes Nucleic Acids Res 31 759 768 10.1093/nar/gkg134 1:CAS:528:DC%2BD3sXitlCnsrk%3D 12527786 (Pubitemid 36175966)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.2
, pp. 759-768
-
-
Bullerwell, C.E.1
Leigh, J.2
Forget, L.3
Lang, B.F.4
-
10
-
-
3343011897
-
Evolution of the fungi and their mitochondrial genomes
-
D.K. Arora G.G. Khachatourians (eds). Elsevier Science New York
-
Bullerwell CE, Leigh J, Seif E, Longcore JE, Lang BF (2003c) Evolution of the fungi and their mitochondrial genomes. In: Arora DK, Khachatourians GG (eds) Applied mycology and biotechnology. Volume III: Fungal genomics. Elsevier Science, New York, pp 133-159
-
(2003)
Applied Mycology and Biotechnology. Volume III: Fungal Genomics
, pp. 133-159
-
-
Bullerwell, C.E.1
Leigh, J.2
Seif, E.3
Longcore, J.E.4
Lang, B.F.5
-
11
-
-
0344861878
-
Mitochondrial genomes: Anything goes
-
DOI 10.1016/j.tig.2003.10.012
-
G Burger MW Gray BF Lang 2003 Mitochondrial genomes: anything goes Trends Genet 19 709 716 10.1016/j.tig.2003.10.012 1:CAS:528:DC%2BD3sXpt1emsbY%3D 14642752 (Pubitemid 37464849)
-
(2003)
Trends in Genetics
, vol.19
, Issue.12
, pp. 709-716
-
-
Burger, G.1
Gray, M.W.2
Lang, B.F.3
-
12
-
-
0020428697
-
Intron within the large rRNA gene of N. crassa mitochondria: A long open reading frame and a consensus sequence possibly important in splicing
-
10.1016/0092-8674(82)90307-5 1:CAS:528:DyaL3sXhtVWqt7g%3D 6218884
-
JM Burke UL RajBhandary 1982 Intron within the large rRNA gene of N. crassa mitochondria: a long open reading frame and a consensus sequence possibly important in splicing Cell 31 509 520 10.1016/0092-8674(82)90307-5 1:CAS:528:DyaL3sXhtVWqt7g%3D 6218884
-
(1982)
Cell
, vol.31
, pp. 509-520
-
-
Burke, J.M.1
Rajbhandary, U.L.2
-
13
-
-
0021894722
-
The unusual varl gene of yeast mitochondrial DNA
-
10.1126/science.2990030 1:CAS:528:DyaL2MXksVyqt7o%3D 2990030
-
RA Butow PS Perlman LI Grossman 1985 The unusual varl gene of yeast mitochondrial DNA Science 228 1496 1501 10.1126/science.2990030 1:CAS:528:DyaL2MXksVyqt7o%3D 2990030
-
(1985)
Science
, vol.228
, pp. 1496-1501
-
-
Butow, R.A.1
Perlman, P.S.2
Grossman, L.I.3
-
14
-
-
0037134512
-
Elucidation of the metabolic fate of glucose in the filamentous fungus Trichoderma reesei using expressed sequence tag (EST) analysis and cDNA microarrays
-
DOI 10.1074/jbc.M107651200
-
FS Chambergo ED Bonaccorsi AJ Ferreira AS Ramos JR Ferreira Jr J Abrahao-Neto JP Farah H El-Dorry 2002 Elucidation of the metabolic fate of glucose in the filamentous fungus Trichoderma reesei using expressed sequence tag (EST) analysis and cDNA microarrays J Biol Chem 277 3983 13988 10.1074/jbc.M107651200 (Pubitemid 34968006)
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.16
, pp. 13983-13988
-
-
Chambergo, F.S.1
Bonaccorsi, E.D.2
Ferreira, A.J.S.3
Ramos, A.S.P.4
Junior, J.R.F.5
Abrahao-Neto, J.6
Simon Farah, J.P.7
El-Dorry, H.8
-
15
-
-
0026410644
-
A mixed group II/group III twintron in the Euglena gracilis chloroplast ribosomal protein S3 gene: Evidence for intron insertion during gene evolution
-
10.1093/nar/19.23.6491 1:CAS:528:DyaK38Xlt1Omsw%3D%3D 1721702
-
DW Copertino DA Christopher RB Hallick 1991 A mixed group II/group III twintron in the Euglena gracilis chloroplast ribosomal protein S3 gene: evidence for intron insertion during gene evolution Nucleic Acids Res 19 6491 6497 10.1093/nar/19.23.6491 1:CAS:528:DyaK38Xlt1Omsw%3D%3D 1721702
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 6491-6497
-
-
Copertino, D.W.1
Christopher, D.A.2
Hallick, R.B.3
-
16
-
-
0029009971
-
Incorporation of the yeast mitochondrial ribosomal protein Mrp2 into ribosomal subunits requires the mitochondrially encoded Var1 protein
-
10.1007/BF00293206 1:CAS:528:DyaK2MXmsVShtbw%3D 7770043
-
SC Davis SR Ellis 1995 Incorporation of the yeast mitochondrial ribosomal protein Mrp2 into ribosomal subunits requires the mitochondrially encoded Var1 protein Mol Gen Genet 247 379 386 10.1007/BF00293206 1:CAS:528: DyaK2MXmsVShtbw%3D 7770043
-
(1995)
Mol Gen Genet
, vol.247
, pp. 379-386
-
-
Davis, S.C.1
Ellis, S.R.2
-
17
-
-
0000228203
-
A model of evolutionary change in proteins
-
M.O. Dayhoff (eds). National Biomedical Research Foundation Washington, DC
-
Dayhoff MO, Schwartz RM, Orcutt BC (1978) A model of evolutionary change in proteins. In: Dayhoff MO (ed) Atlas of protein sequence and structure, supplement 3. National Biomedical Research Foundation, Washington, DC, pp 345-352
-
(1978)
Atlas of Protein Sequence and Structure, Supplement 3
, pp. 345-352
-
-
Dayhoff, M.O.1
Schwartz, R.M.2
Orcutt, B.C.3
-
18
-
-
33746275499
-
The complete chloroplast genome sequence of the chlorophycean green alga Scenedesmus obliquus reveals a compact gene organization and a biased distribution of genes on the two DNA strands
-
DOI 10.1186/1471-2148-6-37
-
JC De Cambiaire C Otis C Lemieux M Turmel 2006 The complete chloroplast genome sequence of the chlorophycean green alga Senedesmus obliquus reveals a compact gene organization and a biased distribution of genes on the two DNA strands BMC Evol Biol 6 37 10.1186/1471-2148-6-37 16638149 (Pubitemid 44104991)
-
(2006)
BMC Evolutionary Biology
, vol.6
, pp. 37
-
-
De Cambiaire, J.-C.1
Otis, C.2
Lemieux, C.3
Turmel, M.4
-
19
-
-
0041656873
-
Variant forms of mitochondrial translation products in yeast: Evidence for location of determinants on mitochondrial DNA
-
10.1073/pnas.73.4.1083 1:CAS:528:DyaE28XktFKrs7k%3D 772678
-
MG Douglas RA Butow 1976 Variant forms of mitochondrial translation products in yeast: evidence for location of determinants on mitochondrial DNA Proc Natl Acad Sci USA 73 1083 1086 10.1073/pnas.73.4.1083 1:CAS:528: DyaE28XktFKrs7k%3D 772678
-
(1976)
Proc Natl Acad Sci USA
, vol.73
, pp. 1083-1086
-
-
Douglas, M.G.1
Butow, R.A.2
-
20
-
-
0018797516
-
Mutants in a mosaic gene reveal functions for introns
-
10.1038/282777a0 1:STN:280:DyaL3c%2FnvVWgsQ%3D%3D 390400
-
B Dujon 1979 Mutants in a mosaic gene reveal functions for introns Nature 282 777 778 10.1038/282777a0 1:STN:280:DyaL3c%2FnvVWgsQ%3D%3D 390400
-
(1979)
Nature
, vol.282
, pp. 777-778
-
-
Dujon, B.1
-
21
-
-
0018903049
-
Sequence of the intron and flanking exons of the mitochondrial 21S rRNA gene of yeast strains having different alleles at the omega and rib-1 loci
-
10.1016/0092-8674(80)90246-9 1:CAS:528:DyaL3cXmtlaqurs%3D 6156002
-
B Dujon 1980 Sequence of the intron and flanking exons of the mitochondrial 21S rRNA gene of yeast strains having different alleles at the omega and rib-1 loci Cell 20 185 197 10.1016/0092-8674(80)90246-9 1:CAS:528:DyaL3cXmtlaqurs%3D 6156002
-
(1980)
Cell
, vol.20
, pp. 185-197
-
-
Dujon, B.1
-
22
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
10.2307/2408678
-
J Felsenstein 1985 Confidence limits on phylogenies: an approach using the bootstrap Evolution 39 783 791 10.2307/2408678
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
23
-
-
0003437299
-
-
Distributed by the author. Department of Genetics, University of Washington, Seattle
-
Felsenstein J (2006) PHYLIP (Phylogeny Inference Package) version 3.6a. Distributed by the author. Department of Genetics, University of Washington, Seattle. http://evolution.genetics.washington.edu/phylip/getme.html. Accessed 11 Jan 2009
-
(2006)
PHYLIP (Phylogeny Inference Package) Version 3.6a.
-
-
Felsenstein, J.1
-
24
-
-
0036184369
-
Hyaloraphidium curvatum: A linear mitochondrial genome, tRNA editing, and an evolutionary link to lower fungi
-
1:CAS:528:DC%2BD38XitFSnsLs%3D 11861890
-
L Forget J Ustinova Z Wang VA Huss BF Lang 2002 Hyaloraphidium curvatum: a linear mitochondrial genome, tRNA editing, and an evolutionary link to lower fungi Mol Biol Evol 19 310 319 1:CAS:528:DC%2BD38XitFSnsLs%3D 11861890
-
(2002)
Mol Biol Evol
, vol.19
, pp. 310-319
-
-
Forget, L.1
Ustinova, J.2
Wang, Z.3
Huss, V.A.4
Lang, B.F.5
-
25
-
-
49749105312
-
The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid
-
10.1016/j.mycres.2008.04.014 1:CAS:528:DC%2BD1cXhsV2ksbfP 18786820
-
EF Formighieri RA Tiburcio ED Armas FJ Medrano H Shimo N Carels A Goes-Neto C Cotomacci MF Carazzolle N Sardinha-Pinto DP Thomazella J Rincones L Digiampietri DM Carraro AM Azeredo-Espin SF Reis AC Deckmann K Gramacho MS Goncalves JP Moura Neto LV Barbosa LW Meinhardt JC Cascardo GA Pereira 2008 The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid Mycol Res 112 1136 1152 10.1016/j.mycres.2008.04.014 1:CAS:528:DC%2BD1cXhsV2ksbfP 18786820
-
(2008)
Mycol Res
, vol.112
, pp. 1136-1152
-
-
Formighieri, E.F.1
Tiburcio, R.A.2
Armas, E.D.3
Medrano, F.J.4
Shimo, H.5
Carels, N.6
Goes-Neto, A.7
Cotomacci, C.8
Carazzolle, M.F.9
Sardinha-Pinto, N.10
Thomazella, D.P.11
Rincones, J.12
Digiampietri, L.13
Carraro, D.M.14
Azeredo-Espin, A.M.15
Reis, S.F.16
Deckmann, A.C.17
Gramacho, K.18
Goncalves, M.S.19
Moura Neto, J.P.20
Barbosa, L.V.21
Meinhardt, L.W.22
Cascardo, J.C.23
Pereira, G.A.24
more..
-
26
-
-
26244448854
-
Optional mitochondrial introns and evidence for a homing-endonuclease gene in the mtDNA rnl gene in Ophiostoma ulmi s. lat.
-
DOI 10.1017/S095375620500376X, PII S095375620500376X
-
EA Gibb G Hausner 2005 Optional mitochondrial introns and evidence for a homing-endonuclease gene in the mtDNA rnl gene in Ophiostoma ulmi s. lat Mycol Res 109 1112 1126 10.1017/S095375620500376X 1:CAS:528:DC%2BD2MXhtVags73F 16279406 (Pubitemid 41411606)
-
(2005)
Mycological Research
, vol.109
, Issue.10
, pp. 1112-1126
-
-
Gibb, E.A.1
Hausner, G.2
-
27
-
-
0033598755
-
Recurrent invasion and extinction of a selfish gene
-
10.1073/pnas.96.24.13880 1:CAS:528:DyaK1MXns1OqtLY%3D 10570167
-
MR Goddard A Burt 1999 Recurrent invasion and extinction of a selfish gene Proc Natl Acad Sci USA 96 13880 13885 10.1073/pnas.96.24.13880 1:CAS:528:DyaK1MXns1OqtLY%3D 10570167
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 13880-13885
-
-
Goddard, M.R.1
Burt, A.2
-
28
-
-
0036300763
-
Synonymous-non-synonymous mutation rates between sequences containing ambiguous nucleotides (syn-SCAN)
-
10.1093/bioinformatics/18.6.886 1:CAS:528:DC%2BD38Xlt1Srtbc%3D 12075026
-
MJ Gonzales JM Dugan RW Shafer 2002 Synonymous-non-synonymous mutation rates between sequences containing ambiguous nucleotides (syn-SCAN) Bioinformatics 18 886 887 10.1093/bioinformatics/18.6.886 1:CAS:528: DC%2BD38Xlt1Srtbc%3D 12075026
-
(2002)
Bioinformatics
, vol.18
, pp. 886-887
-
-
Gonzales, M.J.1
Dugan, J.M.2
Shafer, R.W.3
-
29
-
-
0032008126
-
Mitochondrial ribosomal proteins (MRPs) of yeast
-
1:CAS:528:DyaK1cXht1aku7w%3D 9445368
-
HR Graack B Wittmann-Liebold 1998 Mitochondrial ribosomal proteins (MRPs) of yeast Biochem J 329 433 448 1:CAS:528:DyaK1cXht1aku7w%3D 9445368
-
(1998)
Biochem J
, vol.329
, pp. 433-448
-
-
Graack, H.R.1
Wittmann-Liebold, B.2
-
30
-
-
18344398178
-
Genome structure and gene content in protist mitochondrial DNAs
-
DOI 10.1093/nar/26.4.865
-
MW Gray BF Lang R Cedergren GB Golding C Lemieux D Sankoff M Turmel N Brossard E Delage TG Littlejohn I Plante P Rioux D Saint-Louis Y Zhu G Burger 1998 Genome structure and gene content in protist mitochondrial DNAs Nucleic Acids Res 26 865 878 10.1093/nar/26.4.865 1:CAS:528:DyaK1cXhvVWnsL0%3D 9461442 (Pubitemid 28291636)
-
(1998)
Nucleic Acids Research
, vol.26
, Issue.4
, pp. 865-878
-
-
Gray, M.W.1
Lang, B.F.2
Cedergren, R.3
Golding, G.B.4
Lemieux, C.5
Sankoff, D.6
Turmel, M.7
Brossard, N.8
Delage, E.9
Littlejohn, T.G.10
Plante, I.11
Rioux, P.12
Saint-Louis, D.13
Zhu, Y.14
Burger, G.15
-
31
-
-
0018330988
-
1 is associated with the small ribosomal subunit of mitochondrial ribosomes in yeast
-
DOI 10.1007/BF00267808
-
GS Groot TL Mason N Van Harten-Loosbroek 1979 Var1 is associated with the small ribosomal subunit of mitochondrial ribosomes in yeast Mol Gen Genet 174 339 342 10.1007/BF00267808 1:CAS:528:DyaE1MXltlKku78%3D 384172 (Pubitemid 9248023)
-
(1979)
Molecular and General Genetics
, vol.174
, Issue.3
, pp. 339-342
-
-
Groot, G.S.P.1
Mason, T.L.2
Van Harten-Loosbroek, N.3
-
32
-
-
0033638680
-
Diversity in organization and the origin of gene orders in the mitochondrial DNA molecules of the genus Saccharomyces
-
1:CAS:528:DC%2BD3cXptVWrsb4%3D 11110899
-
C Groth RF Petersen J Piskur 2000 Diversity in organization and the origin of gene orders in the mitochondrial DNA molecules of the genus Saccharomyces Mol Biol Evol 17 1833 1841 1:CAS:528:DC%2BD3cXptVWrsb4%3D 11110899
-
(2000)
Mol Biol Evol
, vol.17
, pp. 1833-1841
-
-
Groth, C.1
Petersen, R.F.2
Piskur, J.3
-
33
-
-
0026022101
-
Structural analysis of the Neurospora mitochondrial large rRNA intron and construction of a mini-intron that shows protein-dependent splicing
-
1:CAS:528:DyaK3MXktVaitLs%3D 1824845
-
QB Guo RA Akins G Garriga AM Lambowitz 1991 Structural analysis of the Neurospora mitochondrial large rRNA intron and construction of a mini-intron that shows protein-dependent splicing J Biol Chem 266 1809 1819 1:CAS:528:DyaK3MXktVaitLs%3D 1824845
-
(1991)
J Biol Chem
, vol.266
, pp. 1809-1819
-
-
Guo, Q.B.1
Akins, R.A.2
Garriga, G.3
Lambowitz, A.M.4
-
34
-
-
37848998569
-
Dothideomycete plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum
-
10.1105/tpc.107.052829 1:CAS:528:DC%2BD1cXns1ensA%3D%3D 18024570
-
JK Hane RGT Lowe PS Solomon K-C Tan CL Schoch JW Spatafora PW Crous C Kodira BW Birren SFF Torriani BA McDonald RP Oliver 2007 Dothideomycete plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum Plant Cell 19 3347 3368 10.1105/tpc.107.052829 1:CAS:528:DC%2BD1cXns1ensA%3D%3D 18024570
-
(2007)
Plant Cell
, vol.19
, pp. 3347-3368
-
-
Hane, J.K.1
Lowe, R.G.T.2
Solomon, P.S.3
Tan, K.-C.4
Schoch, C.L.5
Spatafora, J.W.6
Crous, P.W.7
Kodira, C.8
Birren, B.W.9
Torriani, S.F.F.10
McDonald, B.A.11
Oliver, R.P.12
-
35
-
-
0001151061
-
Diseases of conifers caused by Ophiostoma and Leptographium
-
M.J. Wingfield K.A. Seifert J.F. Webber (eds). APS Press St. Paul, Minnesota
-
Harrington TC (1993a) Diseases of conifers caused by Ophiostoma and Leptographium. In: Wingfield MJ, Seifert KA, Webber JF (eds) Ceratocystis and ophiostoma, taxonomy, ecology and pathogenicity. APS Press, St. Paul, Minnesota, pp 161-172
-
(1993)
Ceratocystis and Ophiostoma, Taxonomy, Ecology and Pathogenicity
, pp. 161-172
-
-
Harrington, T.C.1
-
36
-
-
0002666881
-
Biology and taxonomy of fungi associated with bark beetles
-
T.D. Schowalter G.M. Filip (eds). Academic Press London, San Diego
-
Harrington TC (1993b) Biology and taxonomy of fungi associated with bark beetles. In: Schowalter TD, Filip GM (eds) Beetle-pathogen interactions in conifer forests. Academic Press, London, San Diego, pp 37-58
-
(1993)
Beetle-pathogen Interactions in Conifer Forests
, pp. 37-58
-
-
Harrington, T.C.1
-
37
-
-
77957099255
-
Fungal mitochondrial genomes, plasmids and introns
-
D.K. Arora G.G. Khachatourians (eds). Elsevier Science New York
-
Hausner G (2003) Fungal mitochondrial genomes, plasmids and introns. In: Arora DK, Khachatourians GG (eds) Applied mycology and biotechnology. Volume III: Fungal genomics. Elsevier Science, New York, pp 101-131
-
(2003)
Applied Mycology and Biotechnology. Volume III: Fungal Genomics
, pp. 101-131
-
-
Hausner, G.1
-
38
-
-
4344628861
-
The nuclear small subunit ribosomal genes of Sphaeronaemella helvellae, Sphaeronaemella fimicola, Gabarnaudia betae, and Cornuvesica falcata: Phylogenetic implications
-
DOI 10.1139/b04-046
-
G Hausner J Reid 2004 The nuclear small subunit ribosomal genes of Sphaeronaemella helvellae, Sphaeronaemella fimicola, Gabarnaudia betae and Cornuvesica falcata: phylogenetic implications Can J Bot 82 752 762 10.1139/b04-046 1:CAS:528:DC%2BD2cXnt1Klt7s%3D (Pubitemid 39123383)
-
(2004)
Canadian Journal of Botany
, vol.82
, Issue.6
, pp. 752-762
-
-
Hausner, G.1
Reid, J.2
-
39
-
-
26944485146
-
Unusual compact rDNA gene arrangements within some members of the Ascomycota: Evidence for molecular co-evolution between ITS1 and ITS2
-
DOI 10.1139/G05-037
-
G Hausner X Wang 2005 Unusual compact rDNA gene arrangements within some members of the ascomycota: evidence for molecular co-evolution between ITS1 and ITS2 Genome 48 648 660 10.1139/g05-037 1:CAS:528:DC%2BD2MXhtFegtL%2FP 16094433 (Pubitemid 41483424)
-
(2005)
Genome
, vol.48
, Issue.4
, pp. 648-660
-
-
Hausner, G.1
Wang, X.2
-
40
-
-
0000449269
-
Do galeate-ascospore members of the Cephaloascaceae, Endomycetaceae and Ophiostomataceae share a common phylogeny?
-
10.2307/3760285 1:CAS:528:DyaK3sXks1Okur8%3D
-
G Hausner J Reid GR Klassen 1992 Do galeate-ascospore members of the Cephaloascaceae, Endomycetaceae and Ophiostomataceae share a common phylogeny? Mycologia 84 870 881 10.2307/3760285 1:CAS:528:DyaK3sXks1Okur8%3D
-
(1992)
Mycologia
, vol.84
, pp. 870-881
-
-
Hausner, G.1
Reid, J.2
Klassen, G.R.3
-
41
-
-
0000041727
-
On the phylogeny of Ophiostoma, Ceratocystis s.s., Microascus, and relationships within Ophiostoma based on partial ribosomal DNA sequences
-
10.1139/b93-007 1:CAS:528:DyaK2cXkvF2jtw%3D%3D
-
G Hausner J Reid GR Klassen 1993 On the phylogeny of Ophiostoma, Ceratocystis s.s., Microascus, and relationships within Ophiostoma based on partial ribosomal DNA sequences Can J Bot 71 1249 1265 10.1139/b93-007 1:CAS:528:DyaK2cXkvF2jtw%3D%3D
-
(1993)
Can J Bot
, vol.71
, pp. 1249-1265
-
-
Hausner, G.1
Reid, J.2
Klassen, G.R.3
-
42
-
-
0032993948
-
A long open reading frame in the mitochondrial LSU rRNA group-I intron of Cryphonectria parasitica encodes a putative S5 ribosomal protein fused to a maturase
-
DOI 10.1007/s002940050439
-
G Hausner CB Monteiro-Vitorello DB Searles M Maland DW Fulbright H Bertrand 1999 A long open reading frame in the mitochondrial LSU rRNA group-I intron of Cryphonectria parasitica encodes a putative S5 ribosomal protein fused to a maturase Curr Genet 35 109 117 10.1007/s002940050439 1:CAS:528: DyaK1MXhsFaitLg%3D 10079329 (Pubitemid 29141253)
-
(1999)
Current Genetics
, vol.35
, Issue.2
, pp. 109-117
-
-
Hausner, G.1
Monteiro-Vitorello, C.B.2
Searles, D.B.3
Maland, M.4
Fulbright, D.W.5
Bertrand, H.6
-
43
-
-
33645660652
-
Fungi vectored by the introduced bark beetle Tomicus piniperda in Ontario, Canada and comments on the taxonomy of Leptographium lundbergii, L. terebrantis, L. truncatum and L. wingfieldii
-
10.1139/b05-095 1:CAS:528:DC%2BD28Xit1Kisro%3D
-
G Hausner M Iranpour J-J Kim C Breuil CN Davis EA Gibb J Reid PC Loewen AA Hopkin 2005 Fungi vectored by the introduced bark beetle Tomicus piniperda in Ontario, Canada and comments on the taxonomy of Leptographium lundbergii, L. terebrantis, L. truncatum and L. wingfieldii Can J Bot 83 1222 1237 10.1139/b05-095 1:CAS:528:DC%2BD28Xit1Kisro%3D
-
(2005)
Can J Bot
, vol.83
, pp. 1222-1237
-
-
Hausner, G.1
Iranpour, M.2
Kim, J.-J.3
Breuil, C.4
Davis, C.N.5
Gibb, E.A.6
Reid, J.7
Loewen, P.C.8
Hopkin, A.A.9
-
44
-
-
30744478418
-
Origin and evolution of the chloroplast trnK (matK) intron: A model for evolution of group II intron RNA structures
-
DOI 10.1093/molbev/msj047
-
G Hausner R Olson D Simon I Johnson ER Sanders KG Karol RM McCourt S Zimmerly 2006 Origin and evolution of the chloroplast trnK (matK) intron: a model for evolution of group II intron RNA structures Mol Biol Evol 23 380 391 10.1093/molbev/msj047 1:CAS:528:DC%2BD28XntVaksQ%3D%3D 16267141 (Pubitemid 43100052)
-
(2006)
Molecular Biology and Evolution
, vol.23
, Issue.2
, pp. 380-391
-
-
Hausner, G.1
Olson, R.2
Simon, D.3
Johnson, I.4
Sanders, E.R.5
Karol, K.G.6
McCourt, R.M.7
Zimmerly, S.8
-
45
-
-
0035920159
-
Conversion of the bifunctional 8-oxoguanine/b-d apurine/apyrimidine DNA repair activates of Drosophila ribosomal protein S3 into the human S3 monofunctional β-elimination catalyst through a single amino acid change
-
10.1074/jbc.M101213200
-
V Hedge MR Kelley Y Xu S Mian WA Deutsch 2001 Conversion of the bifunctional 8-oxoguanine/b-d apurine/apyrimidine DNA repair activates of Drosophila ribosomal protein S3 into the human S3 monofunctional β-elimination catalyst through a single amino acid change J Biol Chem 276 27591 27596 10.1074/jbc.M101213200
-
(2001)
J Biol Chem
, vol.276
, pp. 27591-27596
-
-
Hedge, V.1
Kelley, M.R.2
Xu, Y.3
Mian, S.4
Deutsch, W.A.5
-
46
-
-
0022822453
-
An approach to yeast classification by mapping mitochondrial DNA from Dekkera/Brettanomyces and Eeniella genera
-
10.1007/BF00418409 1:CAS:528:DyaL28XhvVSqtrg%3D 3442820
-
P Hoeben GD Clark-Walker 1986 An approach to yeast classification by mapping mitochondrial DNA from Dekkera/Brettanomyces and Eeniella genera Curr Genet 10 371 379 10.1007/BF00418409 1:CAS:528:DyaL28XhvVSqtrg%3D 3442820
-
(1986)
Curr Genet
, vol.10
, pp. 371-379
-
-
Hoeben, P.1
Clark-Walker, G.D.2
-
47
-
-
0021279682
-
Expandable var1 gene of yeast mitochondrial DNA: In-frame insertions can explain the strain-specific protein size polymorphisms
-
10.1073/pnas.81.10.3148 1:CAS:528:DyaL2cXkvVCksb0%3D 6328501
-
ME Hudspeth RD Vincent PS Perlman DS Shumard LO Treisman LI Grossman 1984 Expandable var1 gene of yeast mitochondrial DNA: in-frame insertions can explain the strain-specific protein size polymorphisms Proc Natl Acad Sci USA 81 3148 3152 10.1073/pnas.81.10.3148 1:CAS:528:DyaL2cXkvVCksb0%3D 6328501
-
(1984)
Proc Natl Acad Sci USA
, vol.81
, pp. 3148-3152
-
-
Hudspeth, M.E.1
Vincent, R.D.2
Perlman, P.S.3
Shumard, D.S.4
Treisman, L.O.5
Grossman, L.I.6
-
48
-
-
0031944366
-
A ribosomal protein gene cluster is encoded in the mitochondrial DNA of Dictyostelium discoideum: UGA termination codons and similarity of gene order to Acanthamoeba castellanii
-
DOI 10.1007/s002940050341
-
M Iwamoto M Pi M Kurihara T Morio Y Tanaka 1998 A ribosomal protein gene cluster is encoded in the mitochondrial DNA of Dictyostelium discoideum: UGA termination codons and similarity of gene order to Acanthamoeba castellanii Curr Genet 33 304 310 10.1007/s002940050341 1:CAS:528:DyaK1cXisVyitr0%3D 9560439 (Pubitemid 28221042)
-
(1998)
Current Genetics
, vol.33
, Issue.4
, pp. 304-310
-
-
Iwamoto, M.1
Pi, M.2
Kurihara, M.3
Morio, T.4
Tanaka, Y.5
-
49
-
-
1342265497
-
RpS3, a DNA repair endonuclease and ribosomal protein, is involved in apoptosis
-
DOI 10.1016/S0014-5793(04)00074-2
-
CY Jang JY Lee J Kim 2004 RpS3, a DNA repair endonuclease and ribosomal protein, is involved in apoptosis FEBS Lett 560 81 85 10.1016/S0014-5793(04) 00074-2 1:CAS:528:DC%2BD2cXhsVKhurg%3D 14988002 (Pubitemid 38264297)
-
(2004)
FEBS Letters
, vol.560
, Issue.1-3
, pp. 81-85
-
-
Jang, C.-Y.1
Lee, J.Y.2
Kim, J.3
-
50
-
-
0035980155
-
Yeast ribosomal protein S3 has an endonuclease activity on AP DNA
-
1:CAS:528:DC%2BD3MXmslSls70%3D 11561734
-
SO Jung JY Lee J Kim 2001 Yeast ribosomal protein S3 has an endonuclease activity on AP DNA Mol Cells 12 84 90 1:CAS:528:DC%2BD3MXmslSls70%3D 11561734
-
(2001)
Mol Cells
, vol.12
, pp. 84-90
-
-
Jung, S.O.1
Lee, J.Y.2
Kim, J.3
-
51
-
-
58549107562
-
PKCdelta-dependent functional switch of rpS3 between translation and DNA repair
-
10.1016/j.bbamcr.2008.10.017 1:CAS:528:DC%2BD1MXhtFelt7c%3D 19059439
-
TS Kim HD Kim J Kim 2009 PKCdelta-dependent functional switch of rpS3 between translation and DNA repair Biochim Biophys Acta 1793 395 405 10.1016/j.bbamcr.2008.10.017 1:CAS:528:DC%2BD1MXhtFelt7c%3D 19059439
-
(2009)
Biochim Biophys Acta
, vol.1793
, pp. 395-405
-
-
Kim, T.S.1
Kim, H.D.2
Kim, J.3
-
52
-
-
0025892208
-
The Neurospora mitochondrial tyrosyl-tRNA synthetase is sufficient for group i intron splicing in vitro and uses the carboxy-terminal tRNA-binding domain along with other regions
-
10.1101/gad.5.6.1009 1:CAS:528:DyaK3MXks1yisL8%3D 1828448
-
JD Kittle Jr G Mohr JA Gianelos H Wang AM Lambowitz 1991 The Neurospora mitochondrial tyrosyl-tRNA synthetase is sufficient for group I intron splicing in vitro and uses the carboxy-terminal tRNA-binding domain along with other regions Genes Dev 5 1009 1021 10.1101/gad.5.6.1009 1:CAS:528:DyaK3MXks1yisL8%3D 1828448
-
(1991)
Genes Dev
, vol.5
, pp. 1009-1021
-
-
Kittle Jr, J.D.1
Mohr, G.2
Gianelos, J.A.3
Wang, H.4
Lambowitz, A.M.5
-
53
-
-
57649232505
-
Mycobiota associated with the ambrosia beetle Scolytodes unipunctatus (Coleoptera: Curculionidae, Scolytinae)
-
10.1016/j.mycres.2008.08.003 18801429
-
M Kolařík J Hulcr 2009 Mycobiota associated with the ambrosia beetle Scolytodes unipunctatus (Coleoptera: Curculionidae, Scolytinae) Mycol Res 113 44 60 10.1016/j.mycres.2008.08.003 18801429
-
(2009)
Mycol Res
, vol.113
, pp. 44-60
-
-
Kolařík, M.1
Hulcr, J.2
-
54
-
-
4444293373
-
The analysis of the complete mitochondrial genome of Lecanicillium muscarium (synonym Verticillium lecanii) suggests a minimum common gene organization in mtDNAs of Sordariomycetes: Phylogenetic implications
-
DOI 10.1016/j.fgb.2004.07.003, PII S1087184504001124
-
VN Kouvelis DV Ghikas MA Typas 2004 The analysis of the complete mitochondrial genome of Lecanicillium muscarium (synonym Verticillium lecanii) suggests a minimum common gene organization in mtDNAs of sordariomycetes: phylogenetic implications Fungal Genet Biol 41 930 940 10.1016/j.fgb.2004.07.003 1:CAS:528:DC%2BD2cXntlOht7s%3D 15341915 (Pubitemid 39165638)
-
(2004)
Fungal Genetics and Biology
, vol.41
, Issue.10
, pp. 930-940
-
-
Kouvelis, V.N.1
Ghikas, D.V.2
Typas, M.A.3
-
55
-
-
0019877095
-
Mitochondrial ribosome assembly in Neurospora crassa. Purification of the mitochondrially synthesized ribosomal protein, S-5
-
1:CAS:528:DyaL3MXksFKksbw%3D 6453873
-
RJ LaPolla AM Lambowitz 1981 Mitochondrial ribosome assembly in Neurospora crassa. Purification of the mitochondrially synthesized ribosomal protein, S-5 J Biol Chem 256 7064 7067 1:CAS:528:DyaL3MXksFKksbw%3D 6453873
-
(1981)
J Biol Chem
, vol.256
, pp. 7064-7067
-
-
Lapolla, R.J.1
Lambowitz, A.M.2
-
56
-
-
0032957760
-
Evolution of the mitochondrial rps3 intron in perennial and annual angiosperms and homology to nad5 intron 1
-
1:CAS:528:DyaK1MXislShsrw%3D 10331271
-
J Laroche J Bousquet 1999 Evolution of the mitochondrial rps3 intron in perennial and annual angiosperms and homology to nad5 intron 1 Mol Biol Evol 16 441 452 1:CAS:528:DyaK1MXislShsrw%3D 10331271
-
(1999)
Mol Biol Evol
, vol.16
, pp. 441-452
-
-
Laroche, J.1
Bousquet, J.2
-
57
-
-
0027140141
-
The unusual rps3-like orf712 is functionally essential and structurally conserved in Chlamydomonas
-
DOI 10.1016/0014-5793(93)80808-8
-
XQ Liu C Huang H Xu 1993 The unusual rps3-like orf712 is functionally essential and structurally conserved in Chlamydomonas FEBS Lett 336 225 230 10.1016/0014-5793(93)80808-8 1:CAS:528:DyaK2cXitV2lurY%3D 8262234 (Pubitemid 24007736)
-
(1993)
FEBS Letters
, vol.336
, Issue.2
, pp. 225-230
-
-
Liu, X.-Q.1
Huang, C.2
Xu, H.3
-
58
-
-
0037055255
-
Organization, sequence, and phylogenetic analysis of the ribosomal protein S3 gene from Drosophila virilis
-
DOI 10.1016/S0378-1119(02)00763-1, PII S0378111902007631
-
M Lyamouri E Enerly A Lambertsson 2002 Organization, sequence, and phylogenetic analysis of the ribosomal protein S3 gene from Drosophila virilis Gene 294 147 156 10.1016/S0378-1119(02)00763-1 1:CAS:528:DC%2BD38XmvF2qtrk%3D 12234676 (Pubitemid 35291022)
-
(2002)
Gene
, vol.294
, Issue.1-2
, pp. 147-156
-
-
Lyamouri, M.1
Enerly, E.2
Lambertsson, A.3
-
59
-
-
34848830241
-
Ribosomal protein gene-based phylogeny for finer differentiation and classification of phytoplasmas
-
DOI 10.1099/ijs.0.65013-0
-
M Martini IM Lee KD Bottner Y Zhao S Botti A Bertaccini NA Harrison L Carraro C Marcone AJ Khan R Osler 2007 Ribosomal protein gene-based phylogeny for finer differentiation and classification of phytoplasmas Int J Syst Evol Microbiol 57 2037 2051 10.1099/ijs.0.65013-0 1:CAS:528:DC%2BD2sXht1Wms7rO 17766869 (Pubitemid 47497142)
-
(2007)
International Journal of Systematic and Evolutionary Microbiology
, vol.57
, Issue.9
, pp. 2037-2051
-
-
Martini, M.1
Lee, I.-M.2
Bottner, K.D.3
Zhao, Y.4
Botti, S.5
Bertaccini, A.6
Harrison, N.A.7
Carraro, L.8
Marcone, C.9
Khan, A.J.10
Osler, R.11
-
60
-
-
0030450956
-
Molecular genetics of the peptidyl transferase center and the unusual Var1 protein in yeast mitochondrial ribosomes
-
DOI 10.1007/BF01952114
-
TL Mason C Pan ME Sanchirico K Sirum-Connolly 1996 Molecular genetics of the peptidyl transferase center and the unusual Var1 protein in yeast mitochondrial ribosomes Experientia 52 1148 1157 10.1007/BF01952114 1:CAS:528:DyaK2sXmvFegtA%3D%3D 8988258 (Pubitemid 27022826)
-
(1996)
Experientia
, vol.52
, Issue.12
, pp. 1148-1157
-
-
Mason, T.L.1
Pan, C.2
Sanchirico, M.E.3
Sirum-Connolly, K.4
-
61
-
-
0035896040
-
Function of the Neurospora crassa mitochondrial tyrosyl-tRNA synthetase in RNA splicing. Role of the idiosyncratic N-terminal extension and different modes of interaction with different group i introns
-
10.1006/jmbi.2000.4460
-
G Mohr R Rennard AD Cherniack J Stryker AM Lambowitz 2002 Function of the Neurospora crassa mitochondrial tyrosyl-tRNA synthetase in RNA splicing. Role of the idiosyncratic N-terminal extension and different modes of interaction with different group I introns J Mol Biol 307 75 92 10.1006/jmbi.2000.4460
-
(2002)
J Mol Biol
, vol.307
, pp. 75-92
-
-
Mohr, G.1
Rennard, R.2
Cherniack, A.D.3
Stryker, J.4
Lambowitz, A.M.5
-
62
-
-
0030765887
-
Phylogenetic relationship of organisms obtained by ribosomal protein comparison
-
DOI 10.1007/PL00000578
-
EC Müller B Wittmann-Liebold 1997 Phylogenetic relationship of organisms obtained by ribosomal protein comparison Cell Mol Life Sci 53 34 50 10.1007/PL00000578 9117996 (Pubitemid 27379372)
-
(1997)
Cellular and Molecular Life Sciences
, vol.53
, Issue.1
, pp. 34-50
-
-
Muller, E.-C.1
Wittmann-Liebold, B.2
-
63
-
-
0022507362
-
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
-
1:CAS:528:DyaL28Xmt1aisbs%3D 3444411
-
M Nei T Gojobori 1986 Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions Mol Biol Evol 3 418 426 1:CAS:528:DyaL28Xmt1aisbs%3D 3444411
-
(1986)
Mol Biol Evol
, vol.3
, pp. 418-426
-
-
Nei, M.1
Gojobori, T.2
-
64
-
-
0031812635
-
Relocation of urf a from the mitochondrion to the nucleus cures the mitochondrial mutator phenotype in the fission yeast Schizosaccharomyces pombe
-
DOI 10.1007/s004380050746
-
R Neu S Goffart K Wolf B Schafer 1998 Relocation of urf a from the mitochondrion to the nucleus cures the mitochondrial mutator phenotype in the fission yeast Schizosaccharomyces pombe Mol Gen Genet 258 389 396 10.1007/s004380050746 1:CAS:528:DyaK1cXjvF2nsbc%3D 9648744 (Pubitemid 28279755)
-
(1998)
Molecular and General Genetics
, vol.258
, Issue.4
, pp. 389-396
-
-
Neu, R.1
Goffart, S.2
Wolf, K.3
Schafer, B.4
-
66
-
-
0030203863
-
TreeView: An application to display phylogenetic trees on personal computers
-
1:STN:280:DyaK2s%2FlvVSgtg%3D%3D 8902363
-
RD Page 1996 TreeView: an application to display phylogenetic trees on personal computers Comput Appl Biosci 12 357 358 1:STN:280: DyaK2s%2FlvVSgtg%3D%3D 8902363
-
(1996)
Comput Appl Biosci
, vol.12
, pp. 357-358
-
-
Page, R.D.1
-
67
-
-
0030938243
-
Interactions among scolytid bark beetles, their associated fungi, and live host conifers
-
DOI 10.1146/annurev.ento.42.1.179
-
TD Paine KF Raffa TC Harrington 1997 Interactions among scolytid bark beetles, their associated fungi, and live host conifers Annual Rev Entomol 42 179 206 10.1146/annurev.ento.42.1.179 1:CAS:528:DyaK2sXjvFSlsw%3D%3D (Pubitemid 27169547)
-
(1997)
Annual Review of Entomology
, vol.42
, pp. 179-206
-
-
Paine, T.D.1
Raffa, K.F.2
Harrington, T.C.3
-
68
-
-
33745946040
-
The complete mitochondrial genome of the vascular wilt fungus Verticillium dahliae: A novel gene order for Verticillium and a diagnostic tool for species identification
-
DOI 10.1007/s00294-006-0079-9
-
MP Pantou VN Kouvelis MA Typas 2006 The complete mitochondrial genome of the vascular wilt fungus Verticillium dahliae: a novel gene order for Verticillium and a diagnostic tool for species identification Curr Genet 50 125 136 10.1007/s00294-006-0079-9 1:CAS:528:DC%2BD28XmslKisrg%3D 16733756 (Pubitemid 44057106)
-
(2006)
Current Genetics
, vol.50
, Issue.2
, pp. 125-136
-
-
Pantou, M.P.1
Kouvelis, V.N.2
Typas, M.A.3
-
69
-
-
0029928715
-
The mitochondrial DNA of Allomyces macrogynus: The complete genomic sequence from an ancestral fungus
-
DOI 10.1006/jmbi.1996.0056
-
B Paquin BF Lang 1996 The mitochondrial DNA of Allomyces macrogynus: the complete genomic sequence from an ancestral fungus J Mol Biol 255 688 701 10.1006/jmbi.1996.0056 1:CAS:528:DyaK28XptFKjsg%3D%3D 8636971 (Pubitemid 26105578)
-
(1996)
Journal of Molecular Biology
, vol.255
, Issue.5
, pp. 688-701
-
-
Paquin, B.1
Lang, B.F.2
-
70
-
-
0030993742
-
The fungal mitochondrial genome project: Evolution of fungal mitochondrial genomes and their gene expression
-
DOI 10.1007/s002940050220
-
B Paquin MJ Laforest L Forget I Roewer Z Wang J Longcore BF Lang 1997 The fungal mitochondrial genome project: evolution of fungal mitochondrial genomes and their gene expression Curr Genet 31 380 395 10.1007/s002940050220 1:CAS:528:DyaK2sXjvFOksbs%3D 9162109 (Pubitemid 27273686)
-
(1997)
Current Genetics
, vol.31
, Issue.5
, pp. 380-395
-
-
Paquin, B.1
Laforest, M.-J.2
Forget, L.3
Roewer, I.4
Wang, Z.5
Longcore, J.6
Lang, B.F.7
-
71
-
-
16444376278
-
A novel additional group II intron distinguishes the mitochondrial rps3 gene in gymnosperms
-
DOI 10.1007/s00239-004-0098-4
-
TM Regina E Picardi L Lopez G Pesole C Quagliariello 2005 A novel additional group II intron distinguishes the mitochondrial rps3 gene in gymnosperms J Mol Evol 60 196 206 10.1007/s00239-004-0098-4 1:CAS:528: DC%2BD2MXit1Sntb0%3D 15785848 (Pubitemid 40568859)
-
(2005)
Journal of Molecular Evolution
, vol.60
, Issue.2
, pp. 196-206
-
-
Regina, T.M.R.1
Picardi, E.2
Lopez, L.3
Pesole, G.4
Quagliariello, C.5
-
72
-
-
4344648036
-
Bayesian inference of character evolution
-
DOI 10.1016/j.tree.2004.07.002, PII S0169534704001831
-
F Ronquist 2004 Bayesian inference of character evolution Trends Ecol Evol 19 475 481 10.1016/j.tree.2004.07.002 16701310 (Pubitemid 39151667)
-
(2004)
Trends in Ecology and Evolution
, vol.19
, Issue.9
, pp. 475-481
-
-
Ronquist, F.1
-
73
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
DOI 10.1093/bioinformatics/btg180
-
F Ronquist JP Huelsenbeck 2003 MrBayes 3: Bayesian phylogenetic inference under mixed models Bioinformatics 19 1572 1574 10.1093/bioinformatics/btg180 1:CAS:528:DC%2BD3sXntlKms7k%3D 12912839 (Pubitemid 37038874)
-
(2003)
Bioinformatics
, vol.19
, Issue.12
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
74
-
-
17844366081
-
Transcription and RNA-processing in fission yeast mitochondria
-
DOI 10.1261/rna.7252205
-
B Schafer M Hansen BF Lang 2005 Transcription and RNA-processing in fission yeast mitochondria RNA 11 785 795 10.1261/rna.7252205 15811919 (Pubitemid 40594343)
-
(2005)
RNA
, vol.11
, Issue.5
, pp. 785-795
-
-
Schafer, B.1
Hansen, M.2
Lang, B.F.3
-
76
-
-
42649102999
-
The sporadic occurrence of a group i intron-like element in the mtDNA rnl gene of Ophiostoma novo-ulmi subsp. americana
-
10.1016/j.mycres.2007.11.017 1:CAS:528:DC%2BD1cXnsVKqsL4%3D 18406119
-
J Sethuraman CV Okoli A Majer TL Corkery G Hausner 2008 The sporadic occurrence of a group I intron-like element in the mtDNA rnl gene of Ophiostoma novo-ulmi subsp. americana Mycol Res 112 564 582 10.1016/j.mycres.2007.11.017 1:CAS:528:DC%2BD1cXnsVKqsL4%3D 18406119
-
(2008)
Mycol Res
, vol.112
, pp. 564-582
-
-
Sethuraman, J.1
Okoli, C.V.2
Majer, A.3
Corkery, T.L.4
Hausner, G.5
-
77
-
-
0344466585
-
The PRALINE online server: Optimising progressive multiple alignment on the web
-
10.1016/j.compbiolchem.2003.09.002 1:CAS:528:DC%2BD3sXpt1Klsrg%3D 14642759
-
VA Simossis J Heringa 2003 The PRALINE online server: optimising progressive multiple alignment on the web Comput Biol Chem 27 511 519 10.1016/j.compbiolchem.2003.09.002 1:CAS:528:DC%2BD3sXpt1Klsrg%3D 14642759
-
(2003)
Comput Biol Chem
, vol.27
, pp. 511-519
-
-
Simossis, V.A.1
Heringa, J.2
-
78
-
-
23144440940
-
PRALINE: A multiple sequence alignment toolbox that integrates homology-extended and secondary structure information
-
DOI 10.1093/nar/gki390
-
VA Simossis J Heringa 2005 PRALINE: a multiple sequence alignment toolbox that integrates homology-extended and secondary structure information Nucleic Acids Res 33 W289 W294 10.1093/nar/gki390 1:CAS:528:DC%2BD2MXlslyrur0%3D 15980472 (Pubitemid 44529928)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.WEB. SERV. ISS.
-
-
Simossis, V.A.1
Heringa, J.2
-
79
-
-
34547894695
-
Reconstructing the evolution of the mitochondrial ribosomal proteome
-
DOI 10.1093/nar/gkm441
-
P Smits JA Smeitink LP van den Heuvel MA Huynen TJ Ettema 2007 Reconstructing the evolution of the mitochondrial ribosomal proteome Nucleic Acids Res 35 4686 4703 10.1093/nar/gkm441 1:CAS:528:DC%2BD2sXpt1Citrc%3D 17604309 (Pubitemid 47250341)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.14
, pp. 4686-4703
-
-
Smits, P.1
Smeitink, J.A.M.2
Van Den Heuvel, L.P.3
Huynen, M.A.4
Ettema, T.J.G.5
-
80
-
-
0028121349
-
Polyphyletic origins of ophiostomatoid fungi
-
10.1016/S0953-7562(09)80327-4
-
JW Spatafora M Blackwell 1994 Polyphyletic origins of ophiostomatoid fungi Mycol Res 98 1 9 10.1016/S0953-7562(09)80327-4
-
(1994)
Mycol Res
, vol.98
, pp. 1-9
-
-
Spatafora, J.W.1
Blackwell, M.2
-
81
-
-
33847669179
-
The mitochondrial genome of the moss physcomitrella patens sheds new light on mitochondrial evolution in land plants
-
DOI 10.1093/molbev/msl198
-
K Terasawa M Odahara Y Kabeya T Kikugawa Y Sekine M Fujiwara N Sato 2007 The mitochondrial genome of the moss Physcomitrella patens sheds new light on mitochondrial evolution in land plants Mol Biol Evol 24 699 709 10.1093/molbev/msl198 1:CAS:528:DC%2BD2sXjtlersrk%3D 17175527 (Pubitemid 46355794)
-
(2007)
Molecular Biology and Evolution
, vol.24
, Issue.3
, pp. 699-709
-
-
Terasawa, K.1
Odahara, M.2
Kabeya, Y.3
Kikugawa, T.4
Sekine, Y.5
Fujiwara, M.6
Sato, N.7
-
82
-
-
0018568030
-
The role of var1 in the assembly of yeast mitochondrial ribosomes
-
P Terpstra RA Butow 1979 The role of var1 in the assembly of yeast mitochondrial ribosomes J Biol Chem 254 12662 12669 1:CAS:528:DyaL3cXjtV2l 387794 (Pubitemid 10137656)
-
(1979)
Journal of Biological Chemistry
, vol.254
, Issue.24
, pp. 12662-12669
-
-
Terpstra, P.1
Butow, R.A.2
-
83
-
-
0018653888
-
The association of var1 with the 38S mitochondrial ribosomal subunit in yeast
-
P Terpstra E Zanders RA Butow 1979 The association of var1 with the 38 S mitochondrial ribosomal subunit in yeast J Biol Chem 254 12653 12661 1:CAS:528:DyaL3cXhvFSg 387793 (Pubitemid 10137655)
-
(1979)
Journal of Biological Chemistry
, vol.254
, Issue.24
, pp. 12653-12661
-
-
Terpstra, P.1
Zanders, E.2
Butow, R.A.3
-
84
-
-
0031574072
-
The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
DOI 10.1093/nar/25.24.4876
-
JD Thompson TJ Gibson F Plewniak F Jeanmougin DG Higgins 1997 The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Res 25 4876 4882 10.1093/nar/25.24.4876 1:CAS:528:DyaK1cXntFyntQ%3D%3D 9396791 (Pubitemid 28022245)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.24
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
85
-
-
0042922459
-
The mitochondrial genome of Chara vulgaris: Insights into the mitochondrial DNA architecture of the last common ancestor of green algae and land plants
-
DOI 10.1105/tpc.013169
-
M Turmel C Otis C Lemieux 2003 The mitochondrial genome of Chara vulgaris: insights into the mitochondrial architecture of the last ancestor of green algae and land plants Plant Cell 15 1888 1903 10.1105/tpc.013169 1:CAS:528:DC%2BD3sXms1Wlsbg%3D 12897260 (Pubitemid 37078342)
-
(2003)
Plant Cell
, vol.15
, Issue.8
, pp. 1888-1903
-
-
Turmel, M.1
Otis, C.2
Lemieux, C.3
-
86
-
-
34249666092
-
Species boundaries and phylogenetic relationships within the green algal genus Codium (Bryopsidales) based on plastid DNA sequences
-
DOI 10.1016/j.ympev.2007.01.009, PII S1055790307000115
-
H Verbruggen F Leliaert CA Maggs S Shimada T Schils J Provan D Booth S Murphy O De Clerck DS Littler MM Littler E Coppejans 2007 Species boundaries and phylogenetic relationships within the green algal genus Codium (Bryopsidales) based on plastid DNA sequences Mol Phylogenet Evol 44 240 254 10.1016/j.ympev.2007.01.009 1:CAS:528:DC%2BD2sXmtVOltLs%3D 17346993 (Pubitemid 46829919)
-
(2007)
Molecular Phylogenetics and Evolution
, vol.44
, Issue.1
, pp. 240-254
-
-
Verbruggen, H.1
Leliaert, F.2
Maggs, C.A.3
Shimada, S.4
Schils, T.5
Provan, J.6
Booth, D.7
Murphy, S.8
De Clerck, O.9
Littler, D.S.10
Littler, M.M.11
Coppejans, E.12
-
87
-
-
38849095278
-
The mitochondrial genome of the Basidiomycete fungus Pleurotus ostreatus (oyster mushroom)
-
DOI 10.1111/j.1574-6968.2007.01048.x
-
Y Wang F Zeng CC Hon Y Zhang FC Leung 2008 The mitochondrial genome of the basidiomycete fungus Pleurotus ostreatus (oyster mushroom) FEMS Microbiol Lett 280 34 41 10.1111/j.1574-6968.2007.01048.x 1:CAS:528:DC%2BD1cXivFejsb0%3D 18248422 (Pubitemid 351207295)
-
(2008)
FEMS Microbiology Letters
, vol.280
, Issue.1
, pp. 34-41
-
-
Wang, Y.1
Zeng, F.2
Hon, C.C.3
Zhang, Y.4
Leung, F.C.C.5
-
88
-
-
0025104258
-
Mobility of two optional G+C-rich clusters of the var1 gene of yeast mitochondrial DNA
-
1:CAS:528:DyaK3MXhvVGlsw%3D%3D 2227389
-
JM Wenzlau PS Perlman 1990 Mobility of two optional G+C-rich clusters of the var1 gene of yeast mitochondrial DNA Genetics 126 53 62 1:CAS:528: DyaK3MXhvVGlsw%3D%3D 2227389
-
(1990)
Genetics
, vol.126
, pp. 53-62
-
-
Wenzlau, J.M.1
Perlman, P.S.2
-
90
-
-
0003421150
-
-
M.J. Wingfield K.A. Seifert J.F. Webber (eds). American Phytopathological Society Press St. Paul
-
Wingfield MJ, Seifert KA, Webber JF (eds) (1993) Ceratocystis and ophiostoma. Biology, taxonomy and ecology. American Phytopathological Society Press, St. Paul
-
(1993)
Ceratocystis and Ophiostoma. Biology, Taxonomy and Ecology
-
-
-
91
-
-
0025086049
-
Nucleotide sequence of the unassigned reading frame urf a in the mitochondrial genome of three Schizosaccharomyces pombe strains
-
10.1093/nar/18.22.6686 1:CAS:528:DyaK3MXktVaisr4%3D 2251129
-
M Zimmer T Schiebner M Krabusch K Wolf 1990 Nucleotide sequence of the unassigned reading frame urf a in the mitochondrial genome of three Schizosaccharomyces pombe strains Nucleic Acids Res 18 6686 10.1093/nar/18.22. 6686 1:CAS:528:DyaK3MXktVaisr4%3D 2251129
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 6686
-
-
Zimmer, M.1
Schiebner, T.2
Krabusch, M.3
Wolf, K.4
-
92
-
-
0025969335
-
Characterization of a novel open reading frame, urf a, in the mitochondrial genome of fission yeast: Correlation of urf a mutations with a mitochondrial mutator phenotype and a possible role of frameshifting in urf a expression
-
10.1007/BF00326289 1:CAS:528:DyaK3MXmsV2hs7c%3D 2065367
-
M Zimmer M Krabusch K Wolf 1991 Characterization of a novel open reading frame, urf a, in the mitochondrial genome of fission yeast: correlation of urf a mutations with a mitochondrial mutator phenotype and a possible role of frameshifting in urf a expression Curr Genet 19 95 102 10.1007/BF00326289 1:CAS:528:DyaK3MXmsV2hs7c%3D 2065367
-
(1991)
Curr Genet
, vol.19
, pp. 95-102
-
-
Zimmer, M.1
Krabusch, M.2
Wolf, K.3
|