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Volumn 25, Issue 10, 2009, Pages 1023-1028

Short communication: Association of HLA-A*1101 with resistance and B*4006 with susceptibility to HIV and HIV-TB: An in silico analysis of promiscuous T cell epitopes

Author keywords

[No Author keywords available]

Indexed keywords

EPITOPE; HLA A ANTIGEN; HLA B ANTIGEN; HLA DR ANTIGEN; HLA DR2 ANTIGEN;

EID: 70449496095     PISSN: 08892229     EISSN: None     Source Type: Journal    
DOI: 10.1089/aid.2009.0022     Document Type: Article
Times cited : (13)

References (22)
  • 1
    • 77649191667 scopus 로고    scopus 로고
    • Global Tuberculosis Control
    • Global Tuberculosis Control, WHO Report, 2008.
    • (2008) WHO Report
  • 2
    • 65649135268 scopus 로고    scopus 로고
    • Behind the numbers
    • National AIDS Control Organization (NACO) Ministry of Health and Family Welfare Government of India 5, 9
    • Khera AK: Behind the numbers. National AIDS Control Organization (NACO), Ministry of Health and Family Welfare, Government of India. Newsletter 2007;3:4, 5, 9.
    • (2007) Newsletter , vol.3 , pp. 4
    • Khera, A.K.1
  • 3
    • 44949100369 scopus 로고    scopus 로고
    • Nonhuman primate models and the failure of the Merck HIV-1 vaccine in humans
    • Watkins DI, Burton DR, Kallas EG, Moore JP, and Koff WC: Nonhuman primate models and the failure of the Merck HIV-1 vaccine in humans. Nat Med 2008;14:617-621.
    • (2008) Nat Med , vol.14 , pp. 617-621
    • Watkins, D.I.1    Burton, D.R.2    Kallas, E.G.3    Moore, J.P.4    Koff, W.C.5
  • 4
    • 57449109452 scopus 로고    scopus 로고
    • HIV-1 diseaseinfluencing effects associated with ZNRD1, HCP5 and HLA-C alleles are attributable mainly to either HLA-A10 or HLA-B*57 alleles
    • Catano G, Kulkarni H, He W, et al.: HIV-1 diseaseinfluencing effects associated with ZNRD1, HCP5 and HLA-C alleles are attributable mainly to either HLA-A10 or HLA-B*57 alleles. PLoS ONE 2008;3:e3636.
    • (2008) PLoS ONE , vol.3
    • Catano, G.1    Kulkarni, H.2    He, W.3
  • 5
    • 33750963327 scopus 로고    scopus 로고
    • Association of human leukocyte antigen-A11 with resistance and B40 and DR2 with susceptibility to HIV-1 infection in south India
    • Selvaraj P, Swaminathan S, Alagarasu K, Raghavan S, Narendran G, and Narayanan P: Association of human leukocyte antigen-A11 with resistance and B40 and DR2 with susceptibility to HIV-1 infection in south India. J Acquir Immune Defic Syndr 2006;43:497-499.
    • (2006) J Acquir Immune Defic Syndr , vol.43 , pp. 497-499
    • Selvaraj, P.1    Swaminathan, S.2    Alagarasu, K.3    Raghavan, S.4    Narendran, G.5    Narayanan, P.6
  • 6
    • 3543078012 scopus 로고    scopus 로고
    • HIV and SIV CTL escape: Implications for vaccine design
    • Goulder PJ and Watkins DI: HIV and SIV CTL escape: Implications for vaccine design. Nat Rev Immunol 2004;4:630-640.
    • (2004) Nat Rev Immunol , vol.4 , pp. 630-640
    • Goulder, P.J.1    Watkins, D.I.2
  • 7
    • 0032986179 scopus 로고    scopus 로고
    • Rapid HLA class i DNA typing using microtiter plate-reverse hybridization assay (MRHA) by simple thermoregulation: High-resolution subtyping of the HLA-A2 and -B40 antigen groups
    • Moribe T, Kaneshige T, Inagawa A, et al.: Rapid HLA class I DNA typing using microtiter plate-reverse hybridization assay (MRHA) by simple thermoregulation: High-resolution subtyping of the HLA-A2 and -B40 antigen groups. Hum Immunol 1999;60:539-549.
    • (1999) Hum Immunol , vol.60 , pp. 539-549
    • Moribe, T.1    Kaneshige, T.2    Inagawa, A.3
  • 8
    • 48749103238 scopus 로고    scopus 로고
    • Impact of MHC class i diversity on immune control of immunodeficiency virus replication
    • Goulder PJ and Watkins DI: Impact of MHC class I diversity on immune control of immunodeficiency virus replication. Nat Rev Immunol 2008;8:619-630.
    • (2008) Nat Rev Immunol , vol.8 , pp. 619-630
    • Goulder, P.J.1    Watkins, D.I.2
  • 9
    • 0037606124 scopus 로고    scopus 로고
    • ProPred1: Prediction of promiscuous MHC Class-I binding sites
    • Singh H and Raghava GP: ProPred1: Prediction of promiscuous MHC Class-I binding sites. Bioinformatics 2003;19: 1009-1014.
    • (2003) Bioinformatics , vol.19 , pp. 1009-1014
    • Singh, H.1    Raghava, G.P.2
  • 10
    • 0036137241 scopus 로고    scopus 로고
    • ProPred: Prediction of HLA-DR binding sites
    • Singh H and Raghava GP: ProPred: Prediction of HLA-DR binding sites. Bioinformatics 2001;17:1236-1237.
    • (2001) Bioinformatics , vol.17 , pp. 1236-1237
    • Singh, H.1    Raghava, G.P.2
  • 11
    • 1842555217 scopus 로고    scopus 로고
    • Genomewide conserved epitope profiles of HIV-1 predicted by biophysical properties of MHC binding peptides
    • Sung MH and Simon R: Genomewide conserved epitope profiles of HIV-1 predicted by biophysical properties of MHC binding peptides. J Comput Biol 2004;11:125-145.
    • (2004) J Comput Biol , vol.11 , pp. 125-145
    • Sung, M.H.1    Simon, R.2
  • 13
    • 34548794906 scopus 로고    scopus 로고
    • Extensive HLA class i allele promiscuity among viral CTL epitopes
    • Frahm N, Yusim K, Suscovich TJ, et al.: Extensive HLA class I allele promiscuity among viral CTL epitopes. Eur J Immunol 2007;37:2419-2433.
    • (2007) Eur J Immunol , vol.37 , pp. 2419-2433
    • Frahm, N.1    Yusim, K.2    Suscovich, T.J.3
  • 14
    • 65649134724 scopus 로고    scopus 로고
    • Haplotype analysis of HLAA, -B antigens and -DRB1 alleles in south Indian HIV-1 infected patients with and without pulmonary tuberculosis
    • Raghavan S, Selvaraj P, Swaminathan S, Alagarasu K, Narendran G, and Narayanan P.R: Haplotype analysis of HLAA, -B antigens and -DRB1 alleles in south Indian HIV-1 infected patients with and without pulmonary tuberculosis. Int J Immunogenet 2009;36(3):129-133.
    • (2009) Int J Immunogenet , vol.36 , Issue.3 , pp. 129-133
    • Raghavan, S.1    Selvaraj, P.2    Swaminathan, S.3    Alagarasu, K.4    Narendran, G.5    Narayanan, P.R.6
  • 15
    • 0025176026 scopus 로고
    • HLA-associated susceptibility to acquired immune deficiency syndrome in HIV-1-seropositive subjects
    • Kaplan C, Muller JY, Doinel C, et al.: HLA-associated susceptibility to acquired immune deficiency syndrome in HIV-1-seropositive subjects. Hum Hered 1990;40:290-298.
    • (1990) Hum Hered , vol.40 , pp. 290-298
    • Kaplan, C.1    Muller, J.Y.2    Doinel, C.3
  • 16
    • 0034914922 scopus 로고    scopus 로고
    • HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand
    • Sriwanthana B, Hodge T, Mastro TD, et al.: HIV-specific cytotoxic T lymphocytes, HLA-A11, and chemokine-related factors may act synergistically to determine HIV resistance in CCR5 delta32-negative female sex workers in Chiang Rai, northern Thailand. AIDS Res Hum Retroviruses 2001;17: 719-734.
    • (2001) AIDS Res Hum Retroviruses , vol.17 , pp. 719-734
    • Sriwanthana, B.1    Hodge, T.2    Mastro, T.D.3
  • 17
    • 2942565957 scopus 로고    scopus 로고
    • Correlates of resistance to HIV-1 infection in homosexual men with high-risk sexual behaviour
    • Koning FA, Jansen CA, Dekker J, et al.: Correlates of resistance to HIV-1 infection in homosexual men with high-risk sexual behaviour. AIDS 2004;18:1117-1126.
    • (2004) AIDS , vol.18 , pp. 1117-1126
    • Koning, F.A.1    Jansen, C.A.2    Dekker, J.3
  • 18
    • 0031858602 scopus 로고    scopus 로고
    • Allelic differences in the relationship between proteasome activity and MHC class i peptide loading
    • Benham AM, Gromme M, and Neefjes J: Allelic differences in the relationship between proteasome activity and MHC class I peptide loading. J Immunol 1998;161:83-89.
    • (1998) J Immunol , vol.161 , pp. 83-89
    • Benham, A.M.1    Gromme, M.2    Neefjes, J.3
  • 19
    • 2442489882 scopus 로고    scopus 로고
    • Structures of HLA-A*1101 complexed with immunodominant nonamer and decamer HIV-1 epitopes clearly reveal the presence of a middle, secondary anchor residue
    • Li L and Bouvier M: Structures of HLA-A*1101 complexed with immunodominant nonamer and decamer HIV-1 epitopes clearly reveal the presence of a middle, secondary anchor residue. J Immunol 2004;172:6175-6184.
    • (2004) J Immunol , vol.172 , pp. 6175-6184
    • Li, L.1    Bouvier, M.2
  • 20
    • 26444448384 scopus 로고    scopus 로고
    • De novo generation of escape variant-specific CD8+ T-cell responses following cytotoxic T-lymphocyte escape in chronic human immunodeficiency virus type 1 infection
    • Allen TM, Yu XG, Kalife ET, et al.: De novo generation of escape variant-specific CD8+ T-cell responses following cytotoxic T-lymphocyte escape in chronic human immunodeficiency virus type 1 infection. J Virol 2005;79:12952-12960.
    • (2005) J Virol , vol.79 , pp. 12952-12960
    • Allen, T.M.1    Yu, X.G.2    Kalife, E.T.3
  • 21
    • 32444438223 scopus 로고    scopus 로고
    • ProPred analysis and experimental evaluation of promiscuous T-cell epitopes of three major secreted antigens of Mycobacterium tuberculosis
    • Mustafa AS, and Shaban FA: ProPred analysis and experimental evaluation of promiscuous T-cell epitopes of three major secreted antigens of Mycobacterium tuberculosis. Tuberculosis (Edinb) 2006;86:115-124.
    • (2006) Tuberculosis (Edinb) , vol.86 , pp. 115-124
    • Mustafa, A.S.1    Shaban, F.A.2
  • 22
    • 37349030106 scopus 로고    scopus 로고
    • An unanticipated lack of consensus cytotoxic T lymphocyte epitopes in HIV-1 databases: The contribution of prediction programs
    • Schellens IM, Kesmir C, Miedema F, van Baarle D, and Borghans JA: An unanticipated lack of consensus cytotoxic T lymphocyte epitopes in HIV-1 databases: The contribution of prediction programs. AIDS 2008;22:33-37.
    • (2008) AIDS , vol.22 , pp. 33-37
    • Schellens, I.M.1    Kesmir, C.2    Miedema, F.3    Van Baarle, D.4    Borghans, J.A.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.