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Volumn 4, Issue 11, 2009, Pages

AAV recombineering with single strand oligonucleotides

Author keywords

[No Author keywords available]

Indexed keywords

SINGLE STRANDED DNA; GREEN FLUORESCENT PROTEIN; OLIGONUCLEOTIDE; VIRUS DNA;

EID: 70449449654     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0007705     Document Type: Article
Times cited : (21)

References (32)
  • 1
    • 0020684648 scopus 로고
    • Nucleotide sequence and organization of the adeno-associated virus 2 genome
    • Srivastava A, Lusby EW, Berns KI (1983) Nucleotide sequence and organization of the adeno-associated virus 2 genome. J Virol 45: 555-64.
    • (1983) J Virol , vol.45 , pp. 555-564
    • Srivastava, A.1    Lusby, E.W.2    Berns, K.I.3
  • 2
    • 0029923638 scopus 로고    scopus 로고
    • Second-strand synthesis is a rate-limiting step for efficient transduction by recombinant adeno-associated virus vectors
    • Ferrari FK, Samulski T, Shenk T, Samulski RJ (1996) Second-strand synthesis is a rate-limiting step for efficient transduction by recombinant adeno-associated virus vectors. J Virol 70: 3227-34.
    • (1996) J Virol , vol.70 , pp. 3227-3234
    • Ferrari, F.K.1    Samulski, T.2    Shenk, T.3    Samulski, R.J.4
  • 3
    • 0033814178 scopus 로고    scopus 로고
    • Recruitment of single-stranded recombinant adeno-associated virus vector genomes and intermolecular recombination are responsible for stable transduction of liver in vivo
    • Nakai H, Storm TA, Kay MA (2000) Recruitment of single-stranded recombinant adeno-associated virus vector genomes and intermolecular recombination are responsible for stable transduction of liver in vivo. J Virol 74: 9451-63.
    • (2000) J Virol , vol.74 , pp. 9451-9463
    • Nakai, H.1    Storm, T.A.2    Kay, M.A.3
  • 4
    • 0034756451 scopus 로고    scopus 로고
    • Expanding AAV packaging capacity with trans-splicing or overlapping vectors: A quantitative comparison
    • Duan D, Yue Y, Engelhardt JF (2001) Expanding AAV packaging capacity with trans-splicing or overlapping vectors: a quantitative comparison. Mol Ther 4: 383-91.
    • (2001) Mol Ther , vol.4 , pp. 383-391
    • Duan, D.1    Yue, Y.2    Engelhardt, J.F.3
  • 5
    • 18744381849 scopus 로고    scopus 로고
    • Effects of adeno-associated virus DNA hairpin structure on recombination
    • Choi VW, Samulski RJ, McCarty DM (2005) Effects of adeno-associated virus DNA hairpin structure on recombination. J Virol 79: 6801-7.
    • (2005) J Virol , vol.79 , pp. 6801-6807
    • Choi, V.W.1    Samulski, R.J.2    McCarty, D.M.3
  • 6
    • 0024311525 scopus 로고
    • Helper-free stocks of recombinant adeno-associated viruses: Normal integration does not require viral gene expression
    • Samulski RJ, Chang LS, Shenk T (1989) Helper-free stocks of recombinant adeno-associated viruses: normal integration does not require viral gene expression. J Virol 63: 3822-8.
    • (1989) J Virol , vol.63 , pp. 3822-3828
    • Samulski, R.J.1    Chang, L.S.2    Shenk, T.3
  • 7
    • 33746874152 scopus 로고    scopus 로고
    • Adeno-associated virus serotypes: Vector toolkit for human gene therapy
    • Wu Z, Asokan A, Samulski RJ (2006) Adeno-associated virus serotypes: vector toolkit for human gene therapy. Mol Ther 14: 316-27.
    • (2006) Mol Ther , vol.14 , pp. 316-327
    • Wu, Z.1    Asokan, A.2    Samulski, R.J.3
  • 8
    • 0035989639 scopus 로고    scopus 로고
    • Efficient mouse airway transduction following recombination between AAV vectors carrying parts of a larger gene
    • Halbert CL, Allen JM, Miller AD (2002) Efficient mouse airway transduction following recombination between AAV vectors carrying parts of a larger gene. Nat Biotechnol 20: 697-701.
    • (2002) Nat Biotechnol , vol.20 , pp. 697-701
    • Halbert, C.L.1    Allen, J.M.2    Miller, A.D.3
  • 9
    • 37549053613 scopus 로고    scopus 로고
    • A hybrid vector system expands adeno-associated viral packaging capacity in a transgene-independent manner
    • Ghosh A, Yue Y, Lai Y, Duan D (2008) A hybrid vector system expands adeno-associated viral packaging capacity in a transgene-independent manner. Mol Ther 16: 124-30.
    • (2008) Mol Ther , vol.16 , pp. 124-130
    • Ghosh, A.1    Yue, Y.2    Lai, Y.3    Duan, D.4
  • 10
    • 4544225876 scopus 로고    scopus 로고
    • Trans-splicing adeno-associated viral vector-mediated gene therapy is limited by the accumulation of of spliced mRNA but not dual vector co-infection efficiency
    • Xu Z, Yue Y, Lai Y, Ye C, Qiu J, et al. (2004) Trans-splicing adeno-associated viral vector-mediated gene therapy is limited by the accumulation of of spliced mRNA but not dual vector co-infection efficiency. Hum Gene Ther 15: 896-905.
    • (2004) Hum Gene Ther , vol.15 , pp. 896-905
    • Xu, Z.1    Yue, Y.2    Lai, Y.3    Ye, C.4    Qiu, J.5
  • 11
    • 0030797433 scopus 로고    scopus 로고
    • Hermanns J, Schulze A, Jansen-Db1urr P, Kleinschmidt JA, Schmidt R, et al. (1997) Infection of primary cells by adeno-associated virus type 2 results in a modulation of cell cycle-regulating proteins. J Virol 71: 6020-7.
    • Hermanns J, Schulze A, Jansen-Db1urr P, Kleinschmidt JA, Schmidt R, et al. (1997) Infection of primary cells by adeno-associated virus type 2 results in a modulation of cell cycle-regulating proteins. J Virol 71: 6020-7.
  • 12
    • 36348963101 scopus 로고    scopus 로고
    • The Mre11/Rad50/Nbs1 complex limits adeno-associated virus transduction and replication
    • Schwartz RA, Palacios JA, Cassell GD, Adam S, Giacca M, et al. (2007) The Mre11/Rad50/Nbs1 complex limits adeno-associated virus transduction and replication. J Virol 81: 12936-45.
    • (2007) J Virol , vol.81 , pp. 12936-12945
    • Schwartz, R.A.1    Palacios, J.A.2    Cassell, G.D.3    Adam, S.4    Giacca, M.5
  • 13
    • 0035974901 scopus 로고    scopus 로고
    • Virus-mediated killing of cells that lack p53 activity
    • Raj K, Ogston P, Beard P (2001) Virus-mediated killing of cells that lack p53 activity. Nature 412: 914-7.
    • (2001) Nature , vol.412 , pp. 914-917
    • Raj, K.1    Ogston, P.2    Beard, P.3
  • 14
    • 34547946751 scopus 로고    scopus 로고
    • Chk1 instability is coupled to mitotic cell death of p53-deficient cells in response to virus-induced DNA damage signaling
    • Jurvansuu J, Fragkos M, Ingemarsdotter C, Beard P (2007) Chk1 instability is coupled to mitotic cell death of p53-deficient cells in response to virus-induced DNA damage signaling. J Mol Biol 372: 397-406.
    • (2007) J Mol Biol , vol.372 , pp. 397-406
    • Jurvansuu, J.1    Fragkos, M.2    Ingemarsdotter, C.3    Beard, P.4
  • 15
    • 10644254331 scopus 로고    scopus 로고
    • Viral transport of DNA damage that mimics a stalled replication fork
    • Jurvansuu J, Raj K, Stasiak A, Beard P (2005) Viral transport of DNA damage that mimics a stalled replication fork. J Virol 79: 569-80.
    • (2005) J Virol , vol.79 , pp. 569-580
    • Jurvansuu, J.1    Raj, K.2    Stasiak, A.3    Beard, P.4
  • 16
    • 35148863458 scopus 로고    scopus 로고
    • The role of DNA-PKcs and artemis in opening viral DNA hairpin termini in various tissues in mice
    • Inagaki K, Ma C, Storm TA, Kay MA, Nakai H (2007) The role of DNA-PKcs and artemis in opening viral DNA hairpin termini in various tissues in mice. J Virol 81: 11304-21.
    • (2007) J Virol , vol.81 , pp. 11304-11321
    • Inagaki, K.1    Ma, C.2    Storm, T.A.3    Kay, M.A.4    Nakai, H.5
  • 18
    • 33749590905 scopus 로고    scopus 로고
    • Conservative repair of a chromosomal double-strand break by single-strand DNA through two steps of annealing
    • Storici F, Snipe JR, Chan GK, Gordenin DA, Resnick MA (2006) Conservative repair of a chromosomal double-strand break by single-strand DNA through two steps of annealing. Mol Cell Biol 26: 7645-57.
    • (2006) Mol Cell Biol , vol.26 , pp. 7645-7657
    • Storici, F.1    Snipe, J.R.2    Chan, G.K.3    Gordenin, D.A.4    Resnick, M.A.5
  • 19
    • 0345166826 scopus 로고    scopus 로고
    • Chromosomal site-specific double-strand breaks are efficiently targeted for repair by oligonucleotides in yeast
    • Storici F, Durham CL, Gordenin DA, Resnick MA (2003) Chromosomal site-specific double-strand breaks are efficiently targeted for repair by oligonucleotides in yeast. Proc Natl Acad Sci U S A 100: 14994-9.
    • (2003) Proc Natl Acad Sci U S A , vol.100 , pp. 14994-14999
    • Storici, F.1    Durham, C.L.2    Gordenin, D.A.3    Resnick, M.A.4
  • 20
    • 0035810938 scopus 로고    scopus 로고
    • High efficiency mutagenesis, repair, and engineering of chromosomal DNA using single-stranded oligonucleotides
    • Ellis HM, Yu D, DiTizio T, Court DL (2001) High efficiency mutagenesis, repair, and engineering of chromosomal DNA using single-stranded oligonucleotides. Proc Natl Acad Sci U S A 98: 6742-6.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 6742-6746
    • Ellis, H.M.1    Yu, D.2    DiTizio, T.3    Court, D.L.4
  • 21
    • 33750969980 scopus 로고    scopus 로고
    • Targeted chromosomal gene modification in human cells by single-stranded oligodeoxynucleotides in the presence of a DNA double-strand break
    • Radecke F, Peter I, Radecke S, Gellhaus K, Schwarz K, et al. (2006) Targeted chromosomal gene modification in human cells by single-stranded oligodeoxynucleotides in the presence of a DNA double-strand break. Mol Ther 14: 798-808.
    • (2006) Mol Ther , vol.14 , pp. 798-808
    • Radecke, F.1    Peter, I.2    Radecke, S.3    Gellhaus, K.4    Schwarz, K.5
  • 23
    • 0036097061 scopus 로고    scopus 로고
    • Strand bias in targeted gene repair is influenced by transcriptional activity
    • Liu L, Rice MC, Drury M, Cheng S, Gamper H, et al. (2002) Strand bias in targeted gene repair is influenced by transcriptional activity. Mol Cell Biol 22: 3852-63.
    • (2002) Mol Cell Biol , vol.22 , pp. 3852-3863
    • Liu, L.1    Rice, M.C.2    Drury, M.3    Cheng, S.4    Gamper, H.5
  • 24
    • 0031691257 scopus 로고    scopus 로고
    • Circular intermediates of recombinant adeno-associated virus have defined structural characteristics responsible for long-term episomal persistence in muscle tissue
    • Duan D, Sharma P, Yang J, Yue Y, Dudus L, Zhang Y, et al. (1998) Circular intermediates of recombinant adeno-associated virus have defined structural characteristics responsible for long-term episomal persistence in muscle tissue. J Virol 72: 8568-77.
    • (1998) J Virol , vol.72 , pp. 8568-8577
    • Duan, D.1    Sharma, P.2    Yang, J.3    Yue, Y.4    Dudus, L.5    Zhang, Y.6
  • 25
    • 27144433837 scopus 로고    scopus 로고
    • Interplay between DNA replication and recombination in prokaryotes
    • Kreuzer KN (2005) Interplay between DNA replication and recombination in prokaryotes. Annu Rev Microbiol 59: 43-67.
    • (2005) Annu Rev Microbiol , vol.59 , pp. 43-67
    • Kreuzer, K.N.1
  • 26
    • 0020586937 scopus 로고
    • Rescue of adeno-associated virus from recombinant plasmids: Gene correction within the terminal repeats of AAV
    • Samulski RJ, Srivastava A, Berns KI, Muzyczka N (1983) Rescue of adeno-associated virus from recombinant plasmids: gene correction within the terminal repeats of AAV. Cell 33: 135-43.
    • (1983) Cell , vol.33 , pp. 135-143
    • Samulski, R.J.1    Srivastava, A.2    Berns, K.I.3    Muzyczka, N.4
  • 27
    • 0035875669 scopus 로고    scopus 로고
    • DNA helicase-mediated packaging of adeno-associated virus type 2 genomes into preformed capsids
    • King JA, Dubielzig R, Grimm D, Kleinschmidt JA (2001) DNA helicase-mediated packaging of adeno-associated virus type 2 genomes into preformed capsids. Embo J 20: 3282-91.
    • (2001) Embo J , vol.20 , pp. 3282-3291
    • King, J.A.1    Dubielzig, R.2    Grimm, D.3    Kleinschmidt, J.A.4
  • 28
    • 33845614522 scopus 로고    scopus 로고
    • The involvement of replication in single stranded oligonucleotide-mediated gene repair
    • Huen MS, Li XT, Lu LY, Watt RM, Liu DP, et al. (2006) The involvement of replication in single stranded oligonucleotide-mediated gene repair. Nucleic Acids Res 34: 6183-94.
    • (2006) Nucleic Acids Res , vol.34 , pp. 6183-6194
    • Huen, M.S.1    Li, X.T.2    Lu, L.Y.3    Watt, R.M.4    Liu, D.P.5
  • 29
    • 32844470294 scopus 로고    scopus 로고
    • Physical incorporation of a single-stranded oligodeoxynucleotide during targeted repair of a human chromosomal locus
    • Radecke S, Radecke F, Peter I, Schwarz K (2006) Physical incorporation of a single-stranded oligodeoxynucleotide during targeted repair of a human chromosomal locus. J Gene Med 8: 217-28.
    • (2006) J Gene Med , vol.8 , pp. 217-228
    • Radecke, S.1    Radecke, F.2    Peter, I.3    Schwarz, K.4
  • 30
    • 33750357800 scopus 로고    scopus 로고
    • Host cell DNA repair pathways in adeno-associated viral genome processing
    • Choi VW, McCarty DM, Samulski RJ (2006) Host cell DNA repair pathways in adeno-associated viral genome processing. J Virol 80: 10346-56.
    • (2006) J Virol , vol.80 , pp. 10346-10356
    • Choi, V.W.1    McCarty, D.M.2    Samulski, R.J.3
  • 31
    • 34347252689 scopus 로고    scopus 로고
    • Production and characterization of adeno-associated viral vectors
    • Grieger JC, Choi VW, Samulski RJ (2006) Production and characterization of adeno-associated viral vectors. Nat Protoc 1: 1412-28.
    • (2006) Nat Protoc , vol.1 , pp. 1412-1428
    • Grieger, J.C.1    Choi, V.W.2    Samulski, R.J.3
  • 32
    • 0033022953 scopus 로고    scopus 로고
    • Recombinant adeno-associated virus purification using novel methods improves infectious titer and yield
    • Zolotukhin S, Byrne BJ, Mason E, Zolotukhin I, Potter M, et al. (1999) Recombinant adeno-associated virus purification using novel methods improves infectious titer and yield. Gene Ther 6: 973-85.
    • (1999) Gene Ther , vol.6 , pp. 973-985
    • Zolotukhin, S.1    Byrne, B.J.2    Mason, E.3    Zolotukhin, I.4    Potter, M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.