-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0032834049
-
Physical mapping and partial genetic characterization of the Lactobacillus delbrueckii subsp. bulgaricus bacteriophage lb539
-
Auad L, Räisänen L, Raya RR, Alatossava T (1999) Physical mapping and partial genetic characterization of the Lactobacillus delbrueckii subsp. bulgaricus bacteriophage lb539. Arch Virol 144: 1503-1512
-
(1999)
Arch Virol
, vol.144
, pp. 1503-1512
-
-
Auad, L.1
Räisänen, L.2
Raya, R.R.3
Alatossava, T.4
-
4
-
-
0028113405
-
An intron in the thymidylate synthase gene of Bacillus bacteriophage β22: Evidence for independent evolution of a gene, its group I intron, and the intron open reading frame
-
Bechhofer DH, Hue KK, Shub DA (1994) An intron in the thymidylate synthase gene of Bacillus bacteriophage β22: evidence for independent evolution of a gene, its group I intron, and the intron open reading frame. Proc Natl Acad Sci 91: 11669-11673
-
(1994)
Proc Natl Acad Sci
, vol.91
, pp. 11669-11673
-
-
Bechhofer, D.H.1
Hue, K.K.2
Shub, D.A.3
-
5
-
-
0025688976
-
Phage T4 introns: Self-splicing and mobility
-
Belfort M (1990) Phage T4 introns: self-splicing and mobility. Annu Rev Genet 24: 363-385
-
(1990)
Annu Rev Genet
, vol.24
, pp. 363-385
-
-
Belfort, M.1
-
6
-
-
0024452966
-
DNA packaging in dsDNA bacteriophages
-
Black LW (1989) DNA packaging in dsDNA bacteriophages. Annu Rev Microbiol 43: 267-292
-
(1989)
Annu Rev Microbiol
, vol.43
, pp. 267-292
-
-
Black, L.W.1
-
7
-
-
0034774475
-
Phages of dairy bacteria
-
Brüssow H (2001) Phages of dairy bacteria. Annu Rev Microbiol 55: 283-303
-
(2001)
Annu Rev Microbiol
, vol.55
, pp. 283-303
-
-
Brüssow, H.1
-
8
-
-
0024370698
-
Selection of the 3′-splice site in group I introns
-
Burke JM (1989) Selection of the 3′-splice site in group I introns. FEBS Lett 250: 129-133
-
(1989)
FEBS Lett
, vol.250
, pp. 129-133
-
-
Burke, J.M.1
-
9
-
-
0023664964
-
Structural conventions for group I introns
-
Burke JM, Belfort M, Cech TR, Davies RW, Schweyen RJ, Shub DA, Szostak JW, Tabak HF (1987) Structural conventions for group I introns. Nucleic Acids Res 15: 7217-7221
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 7217-7221
-
-
Burke, J.M.1
Belfort, M.2
Cech, T.R.3
Davies, R.W.4
Schweyen, R.J.5
Shub, D.A.6
Szostak, J.W.7
Tabak, H.F.8
-
10
-
-
0033966457
-
The terminase enzyme from bacteriophage lambda: A DNA packaging machine - A review
-
Catalano CE (2000) The terminase enzyme from bacteriophage lambda: a DNA packaging machine - a review. Cell Mol Life Sci 57: 128-148
-
(2000)
Cell Mol Life Sci
, vol.57
, pp. 128-148
-
-
Catalano, C.E.1
-
11
-
-
0024214064
-
Conserved sequences and structures of group I introns: Building an active site for RNA catalysis - A review
-
Cech TR (1988) Conserved sequences and structures of group I introns: building an active site for RNA catalysis - a review. Gene 73: 259-271
-
(1988)
Gene
, vol.73
, pp. 259-271
-
-
Cech, T.R.1
-
12
-
-
0025367254
-
Self-splicing of group I introns
-
Cech TR (1990) Self-splicing of group I introns. Annu Rev Biochem 59: 543-568
-
(1990)
Annu Rev Biochem
, vol.59
, pp. 543-568
-
-
Cech, T.R.1
-
13
-
-
0001423441
-
Intervening sequence in the thymidylate synthase gene of bacteriophage T4
-
Chu FK, Maley GF, Maley F, Belfort M (1984) Intervening sequence in the thymidylate synthase gene of bacteriophage T4. Proc Natl Acad Sci 81: 3049-3053
-
(1984)
Proc Natl Acad Sci
, vol.81
, pp. 3049-3053
-
-
Chu, F.K.1
Maley, G.F.2
Maley, F.3
Belfort, M.4
-
14
-
-
0022512235
-
Characterization of the intron in the phage T4 thymidylate synthase gene and evidence for its self-excision from the primary transcript
-
Chu FK, Maley GF, West DK, Belfort M, Maley F (1986) Characterization of the intron in the phage T4 thymidylate synthase gene and evidence for its self-excision from the primary transcript. Cell 45: 157-166
-
(1986)
Cell
, vol.45
, pp. 157-166
-
-
Chu, F.K.1
Maley, G.F.2
West, D.K.3
Belfort, M.4
Maley, F.5
-
15
-
-
0024418461
-
Mobile introns: Definition of terms and recommended nomenclature
-
Dujon B, Belfort M, Butow RA, Jacq C, Lemieux C, Perlman PS, Vogt VM (1989) Mobile introns: definition of terms and recommended nomenclature. Gene 82: 115-118
-
(1989)
Gene
, vol.82
, pp. 115-118
-
-
Dujon, B.1
Belfort, M.2
Butow, R.A.3
Jacq, C.4
Lemieux, C.5
Perlman, P.S.6
Vogt, V.M.7
-
16
-
-
0033806414
-
Barriers to intron promiscuity in bacteria
-
Edgell DR, Belfort M, Shub DA (2000) Barriers to intron promiscuity in bacteria. J Bacteriol 182: 5281-5289
-
(2000)
J Bacteriol
, vol.182
, pp. 5281-5289
-
-
Edgell, D.R.1
Belfort, M.2
Shub, D.A.3
-
17
-
-
0033987383
-
Widespread distribution of a group I intron and its three deletion derivatives in the lysin gene of Streptococcus thermophilus bacteriophages
-
Foley S, Bruttin A, Brüssow H (2000) Widespread distribution of a group I intron and its three deletion derivatives in the lysin gene of Streptococcus thermophilus bacteriophages. J Virol 74: 611-618
-
(2000)
J Virol
, vol.74
, pp. 611-618
-
-
Foley, S.1
Bruttin, A.2
Brüssow, H.3
-
18
-
-
0027351327
-
Characterization of a prolate-headed bacteriophage of Lactobacillus delbrueckii subsp. lactis, and its DNA homology with isometric-headed phages
-
Forsman P (1993) Characterization of a prolate-headed bacteriophage of Lactobacillus delbrueckii subsp. lactis, and its DNA homology with isometric-headed phages. Arch Virol 132: 321-330
-
(1993)
Arch Virol
, vol.132
, pp. 321-330
-
-
Forsman, P.1
-
19
-
-
0025144820
-
A self-splicing group I intron in the DNA polymerase gene of Bacillus subtilis bacteriophage SPO1
-
Goodrich-Blair H, Scarlato V, Gott JM, Xu M-Q, Shub DA (1990) A self-splicing group I intron in the DNA polymerase gene of Bacillus subtilis bacteriophage SPO1. Cell 63: 417-424
-
(1990)
Cell
, vol.63
, pp. 417-424
-
-
Goodrich-Blair, H.1
Scarlato, V.2
Gott, J.M.3
Xu, M.-Q.4
Shub, D.A.5
-
20
-
-
0028124527
-
The DNA polymerase genes of several HMU-bacteriophages have similar group I introns with highly divergent open reading frames
-
Goodrich-Blair H, Shub DA (1994) The DNA polymerase genes of several HMU-bacteriophages have similar group I introns with highly divergent open reading frames. Nucleic Acids Res 22: 3715-3721
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 3715-3721
-
-
Goodrich-Blair, H.1
Shub, D.A.2
-
21
-
-
0036306303
-
Group I self-splicing intron in the recA gene of Bacillus anthracis
-
Ko M, Choi H, Park C (2002) Group I self-splicing intron in the recA gene of Bacillus anthracis. J Bacteriol 184: 3917-3922
-
(2002)
J Bacteriol
, vol.184
, pp. 3917-3922
-
-
Ko, M.1
Choi, H.2
Park, C.3
-
22
-
-
0035910270
-
Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
-
Krogh A, Larsson B, von Heijne G, Sonnhammer EL (2001) Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J Mol Biol 305: 567-580
-
(2001)
J Mol Biol
, vol.305
, pp. 567-580
-
-
Krogh, A.1
Larsson, B.2
Von Heijne, G.3
Sonnhammer, E.L.4
-
24
-
-
0033536050
-
Unexpected abundance of self-splicing introns in the genome of bacteriophage Twort: Introns in multiple genes, a single gene with three introns, and exon skipping by group I ribozymes
-
Landthaler M, Shub DA (1999) Unexpected abundance of self-splicing introns in the genome of bacteriophage Twort: introns in multiple genes, a single gene with three introns, and exon skipping by group I ribozymes. Proc Natl Acad Sci 96: 7005-7010
-
(1999)
Proc Natl Acad Sci
, vol.96
, pp. 7005-7010
-
-
Landthaler, M.1
Shub, D.A.2
-
25
-
-
0037901842
-
The nicking homing endonuclease I-BasI is encoded by a group I intron in the DNA polymerase gene of the Bacillus thuringiensis phage Bastille
-
Landthaler M, Shub DA (2003) The nicking homing endonuclease I-BasI is encoded by a group I intron in the DNA polymerase gene of the Bacillus thuringiensis phage Bastille. Nucleic Acids Res 31: 3071-3077
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3071-3077
-
-
Landthaler, M.1
Shub, D.A.2
-
26
-
-
0035419350
-
Ribonucleotide reductase genes of Bacillus prophages: A refuge to introns and intein coding sequences
-
Lazarevic V (2001) Ribonucleotide reductase genes of Bacillus prophages: a refuge to introns and intein coding sequences. Nucleic Acids Res 29: 3212-3218
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 3212-3218
-
-
Lazarevic, V.1
-
27
-
-
0032539601
-
Introns and intein coding sequence in the ribonucleotide reductase genes of Bacillus subtilis temperate bacteriophage SPβ
-
Lazarevic V, Soldo B, Düsterhöft H, Mauël C, Karamata D (1998) Introns and intein coding sequence in the ribonucleotide reductase genes of Bacillus subtilis temperate bacteriophage SPβ. Proc Natl Acad Sci 95: 1692-1697
-
(1998)
Proc Natl Acad Sci
, vol.95
, pp. 1692-1697
-
-
Lazarevic, V.1
Soldo, B.2
Düsterhöft, H.3
Mauël, C.4
Karamata, D.5
-
28
-
-
0025678737
-
Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis
-
Michel F, Westhof E (1990) Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis. J Mol Biol 216: 585-610
-
(1990)
J Mol Biol
, vol.216
, pp. 585-610
-
-
Michel, F.1
Westhof, E.2
-
29
-
-
0028863868
-
A group I intron in the terminase gene of Lactobacillus delbrueckii subsp. lactis phage LL-H
-
Mikkonen M, Alatossava T (1995) A group I intron in the terminase gene of Lactobacillus delbrueckii subsp. lactis phage LL-H. Microbiology 141: 2183-2190
-
(1995)
Microbiology
, vol.141
, pp. 2183-2190
-
-
Mikkonen, M.1
Alatossava, T.2
-
30
-
-
0028295969
-
Ribosome binding site consensus sequence of Lactobacillus delbrueckii subsp. lactis bacteriophage LL-H
-
Mikkonen M, Vuoristo J, Alatossava T (1994) Ribosome binding site consensus sequence of Lactobacillus delbrueckii subsp. lactis bacteriophage LL-H. FEMS Microbiol Lett 116: 315-320
-
(1994)
FEMS Microbiol Lett
, vol.116
, pp. 315-320
-
-
Mikkonen, M.1
Vuoristo, J.2
Alatossava, T.3
-
32
-
-
0034715545
-
Mutational analysis of two structural genes of the temperate lactococcal bacteriophage TP901-1 involved in tail length determination and baseplate assembly
-
Pedersen M, Ostergaard S, Bresciani J, Vogensen FK (2000) Mutational analysis of two structural genes of the temperate lactococcal bacteriophage TP901-1 involved in tail length determination and baseplate assembly. Virology 276: 315-328
-
(2000)
Virology
, vol.276
, pp. 315-328
-
-
Pedersen, M.1
Ostergaard, S.2
Bresciani, J.3
Vogensen, F.K.4
-
33
-
-
0029330798
-
Reverse splicing of the Tetrahymena IVS: Evidence for multiple reaction sites in the 23S rRNA
-
Roman J, Woodson SA (1995) Reverse splicing of the Tetrahymena IVS: evidence for multiple reaction sites in the 23S rRNA. RNA 1: 478-490
-
(1995)
RNA
, vol.1
, pp. 478-490
-
-
Roman, J.1
Woodson, S.A.2
-
34
-
-
0024975570
-
Reverse self-splicing of the Tetrahymena group I intron: Implication for the directionality of splicing and for intron transposition
-
Woodson SA, Cech TR (1989) Reverse self-splicing of the Tetrahymena group I intron: implication for the directionality of splicing and for intron transposition. Cell 57: 335-345
-
(1989)
Cell
, vol.57
, pp. 335-345
-
-
Woodson, S.A.1
Cech, T.R.2
|