Unexpected abundance of self-splicing introns in the genome of bacteriophage Twort: Introns in multiple genes, a single gene with three introns, and exon skipping by group I ribozymes

Proceedings of the National Academy of Sciences of the United States of America

Volumn 96, Issue 12, 1999, Pages 7005-7010

  Landthaler, Markus ^a   Shub, David A ^a  

^a STATE UNIVERSITY OF NEW YORK   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIOPHAGE DNA; GUANOSINE TRIPHOSPHATE; MESSENGER RNA; OLIGONUCLEOTIDE; RESTRICTION ENDONUCLEASE; RIBOZYME;

ARTICLE; BACILLUS; BACTERIAL GENE; BACTERIOPHAGE; DNA HYBRIDIZATION; DNA SEQUENCE; DNA SYNTHESIS; DNA TRANSPOSITION; ELECTROPORATION; ESCHERICHIA COLI; EXON; GENE INSERTION SEQUENCE; INTRON; LISTERIA; NONHUMAN; NUCLEOTIDE SEQUENCE; PLASMID; PRIORITY JOURNAL; RESTRICTION MAPPING; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA ANALYSIS; SPLICEOSOME; STAPHYLOCOCCUS AUREUS;

AMINO ACID SEQUENCE; BACTERIOPHAGES; BASE SEQUENCE; GENES, VIRAL; GENOME, VIRAL; INTRONS; MOLECULAR SEQUENCE DATA; RNA SPLICING; RNA, CATALYTIC; SEQUENCE ALIGNMENT;

BACTERIA (MICROORGANISMS); COLI PHAGE; ESCHERICHIA COLI; LISTERIA; STAPHYLOCOCCUS AUREUS; STAPHYLOCOCCUS PHAGE TWORT; UNIDENTIFIED BACTERIOPHAGE;

EID: 0033536050     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.96.12.7005     Document Type: Article

References (42)

1. Saldanha, R., Mohr, G., Belfort, M. & Lambowitz, A. M. (1993) FASEB J. 7, 15-24.
2. Yamada, T., Tamura, K., Aimi, T. & Songsri, P. (1994) Nucleic Acids Res. 22, 2532-2537.
3. Gott, J. M., Shub, D. A. & Belfort, M. (1986) Cell 47, 81-87.
4. Sjöberg, B. M., Hahne, S., Mathews, C. Z., Mathews, C. K., Rand, K. N. & Gait, M. J. (1986) EMBO J. 5, 2031-2036.
5. Young, P., Ohman, M., Xu, M.-Q., Shub, D. A. & Sjöberg, B. M. (1994) J. Biol. Chem. 269, 20229-20232.
6. Chu, F. K., Maley, G. F., Maley, F. & Belfort, M. (1984) Proc. Natl. Acad. Sci. USA 81, 3049-3053.
7. Bechhofer, D. H., Hue, K. K. & Shub, D. A. (1994) Proc. Natl. Acad. Sci. USA 91, 11669-11673.
8. Goodrich-Blair, H. & Shub, D. A. (1994) Nucleic Acids Res. 22, 3715-3721.
9. Mikkonen, M. & Alatossava, T. (1995) Microbiology 141, 2183-2190.
10. van Sinderen, D., Karsens, H., Kok, J., Terpstra, P., Ruiters, M. H., Venema, G. & Nauta, A. (1996) Mol. Microbiol. 19, 1343-1355.
11. Michel, F. & Westhof, E. (1990) J. Mol. Biol. 216, 585-610.
12. Cech, T. R. (1990) Annu. Rev. Biochem. 59, 543-568.
13. Garriga, G. & Lambowitz, A. M. (1984) Cell 38, 631-641.
14. Goodrich-Blair, H., Scarlato, V., Gott, J. M., Xu, M. Q. & Shub, D. A. (1990) Cell 63, 417-424.
15. Xu, M.-Q., Kathe, S. D., Goodrich-Blair, H., Nierzwicki-Bauer, S. A. & Shub, D. A. (1990) Science 250, 1566-1570.
16. Reinhold-Hurek, B. & Shub, D. A. (1992) Nature (London) 357, 173-176.
17. Quirk, S. M., Bell-Pedersen, D. & Belfort, M. (1989) Cell 56, 455-465.
18. Goodrich-Blair, H. & Shub, D. A. (1996) Cell 84, 211-221.
19. Lambowitz, A. M. & Belfort, M. (1993) Annu. Rev. Biochem. 62, 587-622.
20. Ackermann, H.-W. & DuBow, M. S. (1987) Viruses of Prokaryotes. Volume II: Natural Groups of Bacteriophages (CRC, Boca Raton, FL).
21. Jarvis, A. W., Collins, L. J. & Ackermann, H. W. (1993) Arch. Virol. 133, 75-84.
22. Twort, F. W. (1915) Lancet 189, 1241-1243.
23. Michel, F., Jaeger, L., Westhof, E., Kuras, R., Tihy, F., Xu, M. Q. & Shub, D. A. (1992) Genes Dev. 6, 1373-1385.
24. Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997) Nucleic Acids Res. 25, 3389-3402.
25. Loessner, M. J. & Scherer, S. (1995) J. Bacteriol. 22, 6601-6609.
26. Zink, R. & Loessner, M. J. (1992) Appl. Environ. Microbiol. 58, 296-302.
27. Belfort, M., Pedersen-Lane, J., West, D., Ehrenman, K., Maley, G. F., Chu, F. & Maley, F. (1985) Cell 41, 375-382.
28. Lazarevic, V., Soldo, B., Düsterhöft, A., Hilbert, H., Mauël, C. & Karamata, D. (1998) Proc. Natl. Acad. Sci. USA 95, 1692-1697.
29. Derbyshire, V. & Belfort, M. (1998) Proc. Natl. Acad. Sci. USA 95, 1356-1357.
30. Hall, D. H., Liu, Y. & Shub, D. A. (1989) Nature (London) 340, 575-576.
31. Inoue, T., Sullivan, F. X. & Cech, T. R. (1985) Cell 43, 431-437.
32. Hensgens, L. A. M., Bonen, L., de Haan, M., van der Horst, G. & Grivell, L. A. (1983) Cell 32, 379-389.
33. Cummings, D. J., Domenico, J. M. & Michel, F. (1988) Curr. Genet. 14, 253-264.
34. Sellem, C. H. & Belcour, L. (1994) Nucleic Acids Res. 22, 1135-1137.
35. Belfort, M. (1989) Trends Genet. 5, 209-213.
36. Edgell, D. R., Fast, N. M. & Doolittle, W. F. (1996) Curr. Biol. 6, 385-388.
37. Kuhsel, M. G., Strickland, R. & Palmer, J. D. (1990) Science 250, 1570-1573.
38. Biniszkiewicz, D., Cesnaviciene, E. & Shub, D. A. (1994) EMBO J. 13, 4629-4635.
39. Eddy, S. (1992) Ph.D. thesis (Univ. of Colorado, Boulder).
40. Parker, M. M., Court, D. A., Preiter, K. & Belfort, M. (1996) Genetics 143, 1057-1068.
41. Woodson, S. A. & Cech, T. R. (1989) Cell 57, 335-345.
42. Roman, J. & Woodson, S. A. (1998) Proc. Natl. Acad. Sci. USA 95, 2134-2139.