The construction of a cDNA library enriched for immune genes and the analysis of 7535 ESTs from Chinese mitten crab Eriocheir sinensis

Fish and Shellfish Immunology

Volumn 27, Issue 6, 2009, Pages 684-694

  Gai, Yunchao ^a,b   Wang, Lingling ^a   Zhao, Jianmin ^a   Qiu, Limei ^a   Song, Linsheng ^a   Li, Ling ^a,b   Mu, Changkao ^a,b   Wang, Wan ^a,b   Wang, Mengqiang ^a,b   Zhang, Ying ^a,b   Yao, Xuemei ^a,b   Yang, Jialong ^a  

^a INSTITUTE OF OCEANOLOGY   (China)

^b UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

Author keywords

Bacteria challenge; cDNA library; Eriocheir sinensis; ESTs analysis; Innate immunity

Indexed keywords

BACTERIA (MICROORGANISMS); CRUSTACEA; DECAPODA (CRUSTACEA); ERIOCHEIR SINENSIS; LISTONELLA ANGUILLARUM; STAPHYLOCOCCUS AUREUS;

EID: 70350757635     PISSN: 10504648     EISSN: 10959947     Source Type: Journal    
DOI: 10.1016/j.fsi.2009.08.013     Document Type: Article

References (69)

1. Davey G.C., Caplice N.C., Martin S.A., and Powell R. A survey of genes in the Atlantic salmon (Salmo salar) as identified by expressed sequence tags. Gene 263 (2001) 121-130
2. Ding J.L., Tan K.C., Thanqamani S., Kusuma N., and Seow W.K. Spatial and temporal coordination of expression of immune response genes during pseudomonas infection of horseshoe crab, Carcinoscorpius rotundicauda. Genes Immun 6 (2005) 1-18
3. Ying X., Yang W., and Zhang Y. Comparative studies on fatty acid composition of the ovaries and hepatopancreas at different physiological stages of the Chinese mitten crab. Aquaculture 256 (2006) 617-623
4. Jiang H., Cai Y., Chen L., Zhang X., and Hu S. Functional annotation and analysis of expressed sequence tags from the hepatopancreas of mitten crab (Eriocheir sinensis). Mar Biotechnol (NY) 11 (2009) 317-346
5. Zhao D., Song S., Wang Q., Zhang X., and Hu S. Discovery of immune-related genes in Chinese mitten crab (Eriocheir sinensis) by expressed sequence tag analysis of hemocytes. Aquaculture 287 (2009) 297-303
6. Wang Y.C., Yang C.P., Liu G.F., Jiang J., and Wu J. Generation and analysis of expressed sequence tags from a cDNA library of Tamarix androssowii. Plant Sci 170 (2006) 28-36
7. Chen L., Zhao L.P., and Gao Q.K. Generation and analysis of expressed sequence tags from the tender shoots cDNA library of tea plant (Camellia sinensis). Plant Sci 168 (2005) 359-363
8. Zhang B.L., Liu Q.H., Zhang X.W., Huang Y., and Luo Y. Transcriptome analysis of Deinagkistrodon acutus venomous gland focusing on cellular structure and functional aspects using expressed sequence tags. BMC Genomics 7 (2006) 152
9. Sun H., Zhou K., and Song D. Mitochondrial genome of the Chinese mitten crab Eriocheir japonica sinenesis (Brachyura, Thoracotremata, Grapsoidea) reveals a novel gene order and two target regions of gene rearrangements. Gene 349 (2005) 207-217
10. Coram T.E., and Pang E.C. Isolation and analysis of candidate ascochyta blight defence genes in chickpea. Part I. Generation and analysis of an expressed sequence tag (EST) library. Physiol Mol Plant P 66 (2005) 192-200
11. Rojtinnakorn J., Hirono I., Itami T., Takahashi Y., and Aoki T. Gene expression in hemocytes of kuruma prawn, Penaeus japonicus, in response to infection with WSSV by EST approach. Fish Shellfish Immunol 13 (2002) 69-83
12. Dong B., and Xiang J.H. Discovery of genes involved in defense/immunity functions in a hemocytes cDNA library from Fenneropenaeus chinensis by ESTs annotation. Aquaculture 272 (2007) 208-215
13. Gross P.S., Bartlett T.C., Browdy C.L., Chapman R.W., and Warr G.W. Immune gene discovery by expressed sequence tag analysis of hemocytes and hepatopancreas in the Pacific White Shrimp, Litopenaeus vannamei, and the Atlantic White Shrimp, L-setiferus. Dev Comp Immunol 25 (2001) 565-577
14. Beata S., Rebecca F., and Pang Edwin C.K. Construction of a cDNA library of Lathyrus sativus inoculated with Mycosphaerella pinodes and the expression of potential defense-related expressed sequence tags (ESTs). Physiol Mol Plant P 66 (2005) 55-67
15. Pongsomboon S., Wongpanya R., Tang S., Chalorsrikul A., and Tassanakajon A. Abundantly expressed transcripts in the lymphoid organ of the black tiger shrimp, Penaeus monodon, and their implication in immune function. Fish Shellfish Immunol 25 (2008) 485-493
16. Theopold U., Schmidt O., Soderhall K., and Dushay M.S. Coagulation in arthropods, defense, wound closure and healing. Trends Immunol 25 (2004) 289-294
17. Chen M.Y., Hu K.Y., Huang C.C., and Song Y.L. More than one type of transglutaminase in invertebrates? A second type of transglutaminase is involved in shrimp coagulation. Dev Comp Immunol 29 (2005) 1003-1016
18. Hall M., and Soderhall K. Crayfish α-macroglobulin as a substrate for transglutaminases. Comp Biochem Physiol 108 (1994) 65-72
19. Lesch C., Goto A., Lindgren M., Bidla G., and Dushay M.S. A role for Hemolectin in coagulation and immunity in Drosophila melanogaster. Dev Comp Immunol 31 (2007) 1255-1263
20. Liu Y.C., Li F.H., Wang B., Dong B., Zhang Q.L., Luan W., et al. A transglutaminase from Chinese shrimp (Fenneropenaeus chinensis), full-length cDNA cloning, tissue localization and expression profile after challenge. Fish Shellfish Immunol 22 (2007) 576-588
21. Mende K., Petoukhova O., Koulitchkova V., Schaub G.A., and Lange U. Dipetalogastin, a potent thrombin inhibitor from the blood-sucking insect Dipetalogaster maximus cDNA cloning, expression and characterization. Eur J Biochem 266 (1999) 583-590
22. Reddy V.B., Kounga K., Mariano F., and Lerner E.A. Chrysoptin is a potent glycoprotein IIb/IIIa fibrinogen receptor antagonist present in salivary gland extracts of the deerfly. J Biol Chem 275 (2000) 15861-15867
23. Wang X., Fuchs J.F., Infanger L.C., Rocheleau T.A., and Hillyer J.F. Mosquito innate immunity: involvement of [beta] 1, 3-glucan recognition protein in melanotic encapsulation immune responses in Armigeres subalbatus. Mol Biochem Parasitol 139 (2005) 65-73
24. Söderhäll K., and Cerenius L. Crustacean immunity. Ann Rev Fish Dis 2 (1992) 3-23
25. Jiang H., and Kanost M.R. The clip-domain family of serine proteinases in arthropods. Insect Biochem Molec 30 (2000) 95-105
26. Ko C., Chiou T., Vaseeharan B., Lu J.K., and Chen J.C. Cloning and characterisation of a prophenoloxidase from the hemocytes of mud crab Scylla serrata. Dev Comp Immunol 31 (2007) 12-22
27. Söderhäll K., Cerenius L., and Johansson M.W. The prophenoloxidase activating system and its role in invertebrate defence. Ann NY Acad Sci 712 (1994) 155-161
28. Lu K.Y., Huang Y.T., Lee H.H., and Sung H.H. Cloning the prophenoloxidase cDNA and monitoring the expression of proPO mRNA inprawns (Macrobrachium rosenbergii) stimulated in vivo by CpG oligodeoxynucleotides. Fish Shellfish Immunol 20 (2006) 274-284
29. Gai Y., Wang L., Song L., Zhao J., Qiu L., Wang B., et al. cDNA cloning, characterization and mRNA expression of a pacifastin light chain gene from the Chinese mitten crab Eriocheir sinensis. Fish Shellfish Immunol 25 (2008) 657-663
30. Gai Y., Zhao J., Song L., Li C., Zheng P., Qiu L., et al. A prophenoloxidase from the Chinese mitten crab Eriocheir sinensis: gene cloning, expression and activity analysis. Fish Shellfish Immunol 24 (2008) 156-167
31. Zhao D., Chen L., Qin C., Zhang H., Wu P., Li E., et al. Molecular cloning and characterization of the lipopolysaccharide and [beta]-1, 3-glucan binding protein in Chinese mitten crab (Eriocheir sinensis. Comp Biochem Physiol, B 154 (2009) 17-24
32. Yang L.S., Yin Z.X., Liao J.X., Huang X.D., and Guo C.J. A Toll receptor in shrimp. Mol Immunol 44 (2007) 1999-2008
33. Yang C., Zhang J., Li F., Ma H., and Zhang Q. A Toll receptor from Chinese shrimp Fenneropenaeus chinensis is responsive to Vibrio anguillarum infection. Fish Shellfish Immunol 24 (2008) 564-574
34. Davidson C.R., Best N.M., Francis J.W., Cooper E.L., and Wood T.C. Toll-like receptor genes (TLRs) from Capitella capitata and Helobdella robusta (Annelida). Dev Comp Immunol 32 (2008) 608-612
35. Takeda K., Kaisho T., and Akira S. Toll-like receptors. Annu Rev Immunol 21 (2003) 335-376
36. Hancock R.E., and Lehrer R. Cationic peptides, a new source of antibiotics. Trends Biotechnol 16 (1998) 82-88
37. Chen S.L., Li W., Meng L., Sha Z.X., and Wang Z.J. Molecular cloning and expression analysis of a hepcidin antimicrobial peptide gene from turbot (Scophthalmus maximus). Fish Shellfish Immunol 22 (2007) 172-181
38. Tang Y.L., Shi Y.H., Zhao W., Hao G., and Le G.W. Interaction of MDpep9, a novel antimicrobial peptide from Chinese traditional edible larvae of housefly, with Escherichia coli genomic DNA. Food Chem 115 (2009) 867-872
39. Li C., Zhao J., Song L., Mu C., Zhang H., Gai Y., et al. Molecular cloning, genomic organization and functional analysis of an anti-lipopolysaccharide factor from Chinese mitten crab Eriocheir sinensis. Dev Comp Immunol 32 (2008) 784-794
40. Arner E.S., and Holmgren A. The thioredoxin system in cancer. Semin Cancer Biol 16 (2006) 420-426
41. Shrimali R.K., Weaver J.A., Miller G.F., Starost M.F., and Carlson B.A. Selenoprotein expression is essential in endothelial cell development and cardiac muscle function. Neuromuscul Disord 17 (2007) 135-142
42. Carvalho A.P., Fernandes P.A., and Ramos M.J. Similarities and differences in the thioredoxin superfamily. Prog Biophys Mol Biol 91 (2006) 229-248
43. Fujino G., Noguchi T., Takeda K., and Ichijo H. Thioredoxin and protein kinases in redox signaling. Semin Cancer Biol 16 (2006) 427-435
44. Mu C., Zhao J., Wang L., Song L., Song X., Zhang H., et al. A thioredoxin with antioxidant activity identified from Eriocheir sinensis. Fish Shellfish Immunol 26 (2009) 716-723
45. Burge EJ, Burnett LE, Burnett KG. Time-course analysis of peroxinectin mRNA in the shrimp Litopenaeus vannamei after challenge with Vibrio campbellii. Fish Shellfish Immunol doi:10.1016/j.fsi.2009.05.012.
46. Sritunyalucksana K., Wongsuebsantati K., Johansson M.W., and Soderhall K. Peroxinectin, a cell adhesive protein associated with the proPO system from the black tiger shrimp, Penaeus monodon. Dev Comp Immunol 25 (2001) 353-363
47. Johansson M.W., Patarroyo M., Oberg F., Siegbahn A., and Nilsson K. Myeloperoxidase mediates cell adhesion via the alpha M beta 2 integrin (Mac-1, CD11b/CD18). J Cell Sci 110 (1997) 1133-1139
48. Park K., and Kwak I.S. Characterization of heat shock protein 40 and 90 in Chironomus riparius larvae, effects of di(2-ethylhexyl) phthalate exposure on gene expressions and mouthpart deformities. Chemosphere 74 (2008) 89-95
49. Aufricht C. Heat-shock protein 70, molecular supertool?. Pediatr Nephrol 20 (2005) 707-713
50. Robert J. Evolution of heat shock protein and immunity. Dev Comp Immunol 27 (2003) 449-464
51. Shim J.K., Aye T.T., Kim D.W., Kwon Y.J., and Kwon J.H. Gamma irradiation effects on the induction of three heat shock protein genes (piac25, hsc70 and hsp90) in the Indian meal moth, Plodia interpunctella. J Stored Prod Res 45 (2009) 75-81
52. Beutler B. Innate immunity, an overview. Mol Immunol 40 (2004) 845-859
53. Levashina E.A., Moita L.F., Blandin S., Vriend G., and Lagueux M. Conserved role of a complement-like protein in phagocytosis revealed by dsRNA knockout in cultured cells of the mosquito Anopheles gambiae. Cell 104 (2001) 709-718
54. Zhu Y., Thangamani S., Ho B., and Ding J.L. The ancient origin of the complement system. EMBO J 24 (2005) 382-394
55. Dishaw L.J., Smith S.L., and Bigger C.H. Characterization of a C3-like cDNA in a coral, phylogenetic implications. Immunogenetics 57 (2005) 535-548
56. Zhang H., Song L., Li C., Zhao J., and Wang H. Molecular cloning and characterization of a thioester-containing protein from Zhikong scallop Chlamys farreri. Mol Immunol 44 (2007) 3492-3500
57. Castillo M.G., Goodson M.S., and McFall-Ngai M. Identification and molecular characterization of a complement C3 molecule in a lophotrochozoan, the Hawaiian bobtail squid Euprymna scolopes. Dev Comp Immunol 33 (2009) 69-76
58. Dodds A.W., and Law S.K. Structural basis of the binding specificity of the thioester-containing proteins, C4, C3 and alpha-2-macroglobulin. Complement 166 (1988) 89-97
59. LeBlanc G.A. Crustacean endocrine toxicology, a review. Ecotoxicology 16 (2007) 61-81
60. Soderhall I., Kim Y.A., Jiravanichpaisal P., Lee S.Y., and Soderhall K. An ancient role for a prokineticin domain in invertebrate hematopoiesis. J Immunol 174 (2005) 6153-6160
61. Brückner K., Kockel L., Duchek P., Luque C.M., Rørth P., and Perrimon N. The PDGF/VEGF receptor controls blood cell survival in Drosophila. Dev Cell 7 (2004) 73-84
62. Rodríguez-Martínez S., Cancino-Diaz M.E., Miguel P.S., and Cancino-Diaz J.C. Lipopolysaccharide from Escherichia coli induces the expression of vascular endothelial growth factor via toll-like receptor 4 in human limbal fibroblasts. Exp Eye Res 83 (2006) 1373-1377
63. Cho M.L., Ju J.H., Kim H.R., Oh H.J., Kang C.M., Jhun J.Y., et al. Toll-like receptor 2 ligand mediates the upregulation of angiogenic factor, vascular endothelial growth factor and interleukin-8/CXCL8 in human rheumatoid synovial fibroblasts. Immunol Lett 108 (2007) 121-128
64. De Zoysa M., and Lee J. Suppressor of cytokine signaling 2 (SOCS-2) homologue in disk abalone: cloning, sequence characterization and expression analysis. Fish Shellfish Immunol 26 (2009) 500-508
65. Amparyup P., Jitvaropas R., Pulsook N., and Tassanakajon A. Molecular cloning, characterization and expression of a masquerade-like serine proteinase homologue from black tiger shrimp Penaeus monodon. Fish Shellfish Immunol 22 (2007) 535-546
66. Danielli A., Loukeris T.G., Lagueux M., Muller H.M., Richman A., and Kafatos F.C. A modular chitin-binding protease associated with hemocytes and hemolymph in the mosquito Anopheles gambiae. Proc Natl Acad Sci U S A 97 (2000) 7136-7141
67. Tonganunt M., Phongdara A., Chotigeat W., and Fujise K. Identification and characterization of syntenin binding protein in the black tiger shrimp Penaeus monodon. J Biotechnol 120 (2005) 135-145
68. Bingle C.D., and Vyakarnam A. Novel innate immune functions of the whey acidic protein family. Trends Immunol 29 (2008) 444-453
69. Luo T., Zhang X., Shao Z., and Xu X. PmAV, a novel gene involved in virus resistance of shrimp Penaeus monodon. FEBS Lett 551 (2003) 53-57