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Volumn 7, Issue , 2006, Pages

Transcriptome analysis of Deinagkistrodon acutus venomous gland focusing on cellular structure and functional aspects using expressed sequence tags

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; CREATINE KINASE; ISOMERASE; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE DEHYDROGENASE; SERINE PROTEINASE; SNAKE VENOM; STROMELYSIN; TRANSCRIPTOME;

EID: 33746620560     PISSN: 14712164     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-7-152     Document Type: Article
Times cited : (65)

References (31)
  • 1
    • 15544369378 scopus 로고    scopus 로고
    • From genome to "venome": Molecular origin and evolution of the snake venom proteome inferred from phylogenetic analysis of toxin sequences and related body proteins
    • Fry BG: From genome to "venome": molecular origin and evolution of the snake venom proteome inferred from phylogenetic analysis of toxin sequences and related body proteins. Genome Res 2005, 15:403-420.
    • (2005) Genome Res , vol.15 , pp. 403-420
    • Fry, B.G.1
  • 2
    • 1042298845 scopus 로고    scopus 로고
    • Molecular evolution of myotoxic phospholipases A2 from snake venom
    • Ohno M, Chijiwa T, Oda-Ueda N, Ogawa T, Hattori S: Molecular evolution of myotoxic phospholipases A2 from snake venom. Toxicon 2003, 42:841-854.
    • (2003) Toxicon , vol.42 , pp. 841-854
    • Ohno, M.1    Chijiwa, T.2    Oda-Ueda, N.3    Ogawa, T.4    Hattori, S.5
  • 3
  • 4
    • 0346431970 scopus 로고    scopus 로고
    • Purification, partial characterization and crystallization of acucetin, a protein containing both disintegrin-like and cysteine-rich domains released by auto-proteolysis of a P-III-type metalloproteinase AaH-IV from Agkistrodon acutus venom
    • Zang J, Zhu Z, Yu Y, Teng M, Niu L, Huang Q, Liu Q, Hao Q: Purification, partial characterization and crystallization of acucetin, a protein containing both disintegrin-like and cysteine-rich domains released by auto-proteolysis of a P-III-type metalloproteinase AaH-IV from Agkistrodon acutus venom. Acta Crystallogr D Biol Crystallogr 2003, 59:2310-2312.
    • (2003) Acta Crystallogr D Biol Crystallogr , vol.59 , pp. 2310-2312
    • Zang, J.1    Zhu, Z.2    Yu, Y.3    Teng, M.4    Niu, L.5    Huang, Q.6    Liu, Q.7    Hao, Q.8
  • 5
    • 1542314288 scopus 로고    scopus 로고
    • cDNA cloning, sequence analysis, and recombinant expression of akitonin beta, a C-type lectin-like protein from Agkistrodon acutus
    • Zha XD, Liu J, Xu KS: cDNA cloning, sequence analysis, and recombinant expression of akitonin beta, a C-type lectin-like protein from Agkistrodon acutus. Acta Pharmacol Sin 2004, 25:372-377.
    • (2004) Acta Pharmacol Sin , vol.25 , pp. 372-377
    • Zha, X.D.1    Liu, J.2    Xu, K.S.3
  • 6
    • 15444369454 scopus 로고    scopus 로고
    • Crystal structures and amidolytic activities of two glycosylated snake venom serine proteinases
    • Zhu Z, Liang Z, Zhang T, Zhu Z, Xu W, Teng M, Niu L: Crystal structures and amidolytic activities of two glycosylated snake venom serine proteinases. J Biol Chem 2005, 280:10524-10529.
    • (2005) J Biol Chem , vol.280 , pp. 10524-10529
    • Zhu, Z.1    Liang, Z.2    Zhang, T.3    Zhu, Z.4    Xu, W.5    Teng, M.6    Niu, L.7
  • 8
    • 0035891648 scopus 로고    scopus 로고
    • Establishment of a high throughput EST sequencing system using poly(A) tail-removed cDNA libraries and determination of 36,000 bovine ESTs
    • Takasuga A, Hirotsune S, Itoh R, Jitohzono A, Suzuki H, Aso H, Sugimoto Y: Establishment of a high throughput EST sequencing system using poly(A) tail-removed cDNA libraries and determination of 36,000 bovine ESTs. Nucleic Acids Res 2001, 29:E108.
    • (2001) Nucleic Acids Res , vol.29
    • Takasuga, A.1    Hirotsune, S.2    Itoh, R.3    Jitohzono, A.4    Suzuki, H.5    Aso, H.6    Sugimoto, Y.7
  • 9
    • 5044220772 scopus 로고    scopus 로고
    • Transcript profiling of salinity stress responses by large-scale expressed sequence tag analysis in Mesembryanthemum crystallinum
    • Kore-eda S, Cushman MA, Akselrod I, Bufford D, Fredrickson M, Clark E, Cushman JC: Transcript profiling of salinity stress responses by large-scale expressed sequence tag analysis in Mesembryanthemum crystallinum. Gene 2004, 341:83-92.
    • (2004) Gene , vol.341 , pp. 83-92
    • Kore-eda, S.1    Cushman, M.A.2    Akselrod, I.3    Bufford, D.4    Fredrickson, M.5    Clark, E.6    Cushman, J.C.7
  • 13
    • 28344453534 scopus 로고    scopus 로고
    • Identification and analysis of venom gland-specific genes from the coastal taipan (Oxyuranus scutellatus) and related species
    • Pierre LS, Woods R, Earl S, Masci PP, Lavin MF: Identification and analysis of venom gland-specific genes from the coastal taipan (Oxyuranus scutellatus) and related species. Cell Mol Life Sci 2005, 62:2679-2693.
    • (2005) Cell Mol Life Sci , vol.62 , pp. 2679-2693
    • Pierre, L.S.1    Woods, R.2    Earl, S.3    Masci, P.P.4    Lavin, M.F.5
  • 15
    • 0037121083 scopus 로고    scopus 로고
    • A survey of geneexpression and diversity in the venom glands of the pitviper snake Bothrops insularis through the generation of expressed sequence tags (ESTs)
    • Junqueira-de-Azevedo Ide L, Ho PL: A survey of geneexpression and diversity in the venom glands of the pitviper snake Bothrops insularis through the generation of expressed sequence tags (ESTs). Gene 2002, 299:279-291.
    • (2002) Gene , vol.299 , pp. 279-291
    • Junqueira-de-Azevedo Ide, L.1    Ho, P.L.2
  • 16
    • 0021336798 scopus 로고
    • Protein synthesis by gastric mucosal ribosomes during development in rats
    • Majumdar AP: Protein synthesis by gastric mucosal ribosomes during development in rats. J Pediatr Gastroenterol Nutr 1984, 3:123-127.
    • (1984) J Pediatr Gastroenterol Nutr , vol.3 , pp. 123-127
    • Majumdar, A.P.1
  • 17
    • 0036135117 scopus 로고    scopus 로고
    • Ophidian envenomation strategies and the role of purines
    • Aird SD: Ophidian envenomation strategies and the role of purines. Toxicon 2002, 40:335-393.
    • (2002) Toxicon , vol.40 , pp. 335-393
    • Aird, S.D.1
  • 18
    • 0031769488 scopus 로고    scopus 로고
    • Swimmer 1, a newlow-copy-number LINE family in teleost genomes with sequence similarity to mammalian L1
    • Duvernell DD, Turner BJ: Swimmer 1, a newlow-copy-number LINE family in teleost genomes with sequence similarity to mammalian L1. Mol Biol Evol 1998, 15:1791-1793.
    • (1998) Mol Biol Evol , vol.15 , pp. 1791-1793
    • Duvernell, D.D.1    Turner, B.J.2
  • 19
    • 0030731154 scopus 로고    scopus 로고
    • Determination of the entire sequence of turtle CR1: The first open reading frame of the turtle CR1 element encodes a protein with a novel zinc finger motif
    • Kajikawa M, Ohshima K, Okada N: Determination of the entire sequence of turtle CR1: the first open reading frame of the turtle CR1 element encodes a protein with a novel zinc finger motif. Mol Biol Evol 1997, 14:1206-1217.
    • (1997) Mol Biol Evol , vol.14 , pp. 1206-1217
    • Kajikawa, M.1    Ohshima, K.2    Okada, N.3
  • 21
    • 0031040787 scopus 로고    scopus 로고
    • The Arabidopsis thaliana cDNA sequencing projects
    • Delseny M, Cooke R, Raynal M, Grellet F: The Arabidopsis thaliana cDNA sequencing projects. FEBS Lett 1997, 403:221-224.
    • (1997) FEBS Lett , vol.403 , pp. 221-224
    • Delseny, M.1    Cooke, R.2    Raynal, M.3    Grellet, F.4
  • 22
    • 3242764595 scopus 로고    scopus 로고
    • Bitis gabonica (Gaboon viper) snake venom gland: Toward a catalog for the full-length transcripts (cDNA) and proteins
    • Francischetti IM, My-Pham V, Harrison J, Garfield MK, Ribeiro JM: Bitis gabonica (Gaboon viper) snake venom gland: toward a catalog for the full-length transcripts (cDNA) and proteins. Gene 2004, 337:55-69.
    • (2004) Gene , vol.337 , pp. 55-69
    • Francischetti, I.M.1    My-Pham, V.2    Harrison, J.3    Garfield, M.K.4    Ribeiro, J.M.5
  • 23
    • 0036760535 scopus 로고    scopus 로고
    • Higher-level relationships ofcaenophidian snakes inferred from four nuclear and mitochondrial genes
    • Vidal N, Hedges SB: Higher-level relationships ofcaenophidian snakes inferred from four nuclear and mitochondrial genes. C R Biol 2002, 325:987-995.
    • (2002) C R Biol , vol.325 , pp. 987-995
    • Vidal, N.1    Hedges, S.B.2
  • 24
    • 1942533494 scopus 로고    scopus 로고
    • Assembling an arsenal: Origin and evolution of the snake venom proteome inferred from phylogenetic analysis of toxin sequences
    • Fry BG, Wuster W: Assembling an arsenal: origin and evolution of the snake venom proteome inferred from phylogenetic analysis of toxin sequences. Mol Biol Evol 2004, 21:870-883.
    • (2004) Mol Biol Evol , vol.21 , pp. 870-883
    • Fry, B.G.1    Wuster, W.2
  • 26
    • 84872274287 scopus 로고    scopus 로고
    • Laboratory of PHIL GREEN Site
    • Laboratory of PHIL GREEN Site [http://www.phrap.org/]
  • 27
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • Ewing B, Hillier L, Wendl MC, Green P: Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res 1998, 8:175-185.
    • (1998) Genome Res , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 29
    • 0028181441 scopus 로고
    • Hidden Markov models in computational biology. Applications to protein modeling
    • Krogh A, Brown M, Mian IS, Sjolander K, Haussler D: Hidden Markov models in computational biology. Applications to protein modeling. J Mol Biol 1994, 235:1501-1531.
    • (1994) J Mol Biol , vol.235 , pp. 1501-1531
    • Krogh, A.1    Brown, M.2    Mian, I.S.3    Sjolander, K.4    Haussler, D.5
  • 31
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
    • Kumar S, Tamura K, Nei M: MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief Bioinform 2004, 5:150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.