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Volumn 5267 LNBI, Issue , 2008, Pages 184-197

A fast and exact algorithm for the median of three problem - A graph decomposition approach

Author keywords

[No Author keywords available]

Indexed keywords

BREAKPOINT; EXACT ALGORITHMS; GRAPH DECOMPOSITIONS; MEDIAN PROBLEM; SIMULATED DATA; SMALL SIZE; SUBGRAPHS; THREE PROBLEMS;

EID: 70350536298     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-87989-3_14     Document Type: Conference Paper
Times cited : (7)

References (11)
  • 1
    • 42349094694 scopus 로고    scopus 로고
    • Adam, Z., Sankoff, D.: The ABCs of MGR with DCJ. Evol. Bioinform. 4, 69-74 (2008)
    • Adam, Z., Sankoff, D.: The ABCs of MGR with DCJ. Evol. Bioinform. 4, 69-74 (2008)
  • 2
    • 0036143403 scopus 로고    scopus 로고
    • Genome-scale evolution: Reconstructing gene orders in the ancestral species
    • Bourque, G., Pevzner, P.: Genome-scale evolution: Reconstructing gene orders in the ancestral species. Genome Res. 12, 26-36 (2002)
    • (2002) Genome Res , vol.12 , pp. 26-36
    • Bourque, G.1    Pevzner, P.2
  • 3
    • 70350533666 scopus 로고    scopus 로고
    • Bryant, D.: The complexity of the breakpoint median problem. TR CRM-2579. Centre de recherches mathématiques, Université de Montréal (1998)
    • Bryant, D.: The complexity of the breakpoint median problem. TR CRM-2579. Centre de recherches mathématiques, Université de Montréal (1998)
  • 4
    • 3843132934 scopus 로고    scopus 로고
    • The reversal median problem
    • Caprara, A.: The reversal median problem. Informs J. Comput. 15, 93-113 (2003)
    • (2003) Informs J. Comput , vol.15 , pp. 93-113
    • Caprara, A.1
  • 5
    • 47249129518 scopus 로고    scopus 로고
    • Lenne, R., Solnon, C., Stützle, T., Tannier, E., Birattari, M.: Reactive stochastic local search algorithms for the genomic median problem. In: van Hemert, J., Cotta, C. (eds.) EvoCOP 2008. LNCS, 4972, pp. 266-276. Springer, Heidelberg (2008)
    • Lenne, R., Solnon, C., Stützle, T., Tannier, E., Birattari, M.: Reactive stochastic local search algorithms for the genomic median problem. In: van Hemert, J., Cotta, C. (eds.) EvoCOP 2008. LNCS, vol. 4972, pp. 266-276. Springer, Heidelberg (2008)
  • 6
    • 84957042462 scopus 로고    scopus 로고
    • Moret, B.M.E., Siepel, A.C., Tang, J., Liu, T.: Inversion medians outperform breakpoint medians in phylogeny reconstruction from gene-order data. In: Guigó, R., Gusfield, D. (eds.) WABI 2002. LNCS, 2452. Springer, Heidelberg (2002)
    • Moret, B.M.E., Siepel, A.C., Tang, J., Liu, T.: Inversion medians outperform breakpoint medians in phylogeny reconstruction from gene-order data. In: Guigó, R., Gusfield, D. (eds.) WABI 2002. LNCS, vol. 2452. Springer, Heidelberg (2002)
  • 7
    • 4544280334 scopus 로고    scopus 로고
    • The median problems for breakpoints are NP-complete
    • the Electronic Col loquium of Computational Complexity Report, number TR98-071
    • Pe'er, I., Shamir, R.: The median problems for breakpoints are NP-complete. the Electronic Col loquium of Computational Complexity Report, number TR98-071 (1998)
    • (1998)
    • Pe'er, I.1    Shamir, R.2
  • 8
    • 0031721577 scopus 로고    scopus 로고
    • Multiple genome rearrangement and breakpoint phylogeny
    • Sankoff, D., Blanchette, M.: Multiple genome rearrangement and breakpoint phylogeny. J. Comput. Biol. 5, 555-570 (1998)
    • (1998) J. Comput. Biol , vol.5 , pp. 555-570
    • Sankoff, D.1    Blanchette, M.2
  • 9
    • 70350551466 scopus 로고    scopus 로고
    • Tannier, E., Zheng, C., Sankoff, D.: Multichromosomal median and halving problems. In: Crandall, K.A., Lagergren, J. (eds.) WABI 2008. LNCS (LNBI), 5251. Springer, Heidelberg (2008)
    • Tannier, E., Zheng, C., Sankoff, D.: Multichromosomal median and halving problems. In: Crandall, K.A., Lagergren, J. (eds.) WABI 2008. LNCS (LNBI), vol. 5251. Springer, Heidelberg (2008)
  • 10
    • 56649089597 scopus 로고    scopus 로고
    • Xu, A.W., Sankoff, D.: Decompositions of multiple breakpoint graphs and rapid exact solutions to the median problem. In: Crandall, K.A., Lagergren, J. (eds.) WABI 2008. LNCS (LNBI), 5251. Springer, Heidelberg (2008)
    • Xu, A.W., Sankoff, D.: Decompositions of multiple breakpoint graphs and rapid exact solutions to the median problem. In: Crandall, K.A., Lagergren, J. (eds.) WABI 2008. LNCS (LNBI), vol. 5251. Springer, Heidelberg (2008)
  • 11
    • 24044535485 scopus 로고    scopus 로고
    • Efficient sorting of genomic permutations by translocation, inversion and block interchange
    • Yancopoulos, S., Attie, O., Friedberg, R.: Efficient sorting of genomic permutations by translocation, inversion and block interchange. Bioinform. 21, 3340-3346 (2005)
    • (2005) Bioinform , vol.21 , pp. 3340-3346
    • Yancopoulos, S.1    Attie, O.2    Friedberg, R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.