-
1
-
-
0030130366
-
Genome rearrangements and sorting by reversals
-
Bafna, V., and Pevzner, P.A. 1996. Genome rearrangements and sorting by reversals. SIAM Journal of Computing 25, 272-289.
-
(1996)
SIAM Journal of Computing
, vol.25
, pp. 272-289
-
-
Bafna, V.1
Pevzner, P.A.2
-
3
-
-
0002163159
-
Breakpoint phylogenies
-
Miyano, S., and Takagi, T., eds., Universal Academy Press, Tokyo
-
Blanchette, M., Bourque, G., and Sankoff, D. 1997. Breakpoint phylogenies, 25-34. In Miyano, S., and Takagi, T., eds., Genome Informatics 1997, Universal Academy Press, Tokyo.
-
(1997)
Genome Informatics 1997
, pp. 25-34
-
-
Blanchette, M.1
Bourque, G.2
Sankoff, D.3
-
4
-
-
0029993075
-
Parametric genome rearrangement
-
Blanchette, M., Kunisawa, T., and Sankoff, D. 1996. Parametric genome rearrangement. Gene-Combis (online) and Gene 172, GC11-17.
-
(1996)
Gene-Combis (Online) and Gene
, vol.172
-
-
Blanchette, M.1
Kunisawa, T.2
Sankoff, D.3
-
7
-
-
0030697666
-
On the complexity and approximation of syntenic distance
-
ACM, New York
-
DasGupta, B., Jiang, T., Kannan, S., Li, M., and Sweedyk, Z. 1997. On the complexity and approximation of syntenic distance, 99-108. In Proceedings of the First Annual International Conference on Computational Molecular Biology (RECOMB 97), ACM, New York.
-
(1997)
Proceedings of the First Annual International Conference on Computational Molecular Biology (RECOMB 97)
, pp. 99-108
-
-
DasGupta, B.1
Jiang, T.2
Kannan, S.3
Li, M.4
Sweedyk, Z.5
-
8
-
-
84957709258
-
Original synteny
-
Hirschberg, D., and Myers, G., eds., Springer Verlag, New York
-
Ferretti, V., Nadeau, J.H., and Sankoff, D. 1996. Original synteny, 159-167. In Hirschberg, D., and Myers, G., eds., Combinatorial Pattern Matching, 7th Annual Symposium. Lecture Notes in Computer Science 1075, Springer Verlag, New York.
-
(1996)
Combinatorial Pattern Matching, 7th Annual Symposium. Lecture Notes in Computer Science
, vol.1075
, pp. 159-167
-
-
Ferretti, V.1
Nadeau, J.H.2
Sankoff, D.3
-
9
-
-
0009647449
-
A heuristic algorithm for genome rearrangements
-
Miyano, S., and Takagi, T., eds., Universal Academy Press, Tokyo
-
Gu, Q.-P., Iwata, K., Peng, S., and Chen, Q.-M. 1997. A heuristic algorithm for genome rearrangements, 268-269. In Miyano, S., and Takagi, T., eds., Genome Informatics 1997, Universal Academy Press, Tokyo.
-
(1997)
Genome Informatics 1997
, pp. 268-269
-
-
Gu, Q.-P.1
Iwata, K.2
Peng, S.3
Chen, Q.-M.4
-
12
-
-
0028806782
-
Genome sequence comparison and scenarios for gene rearrangements: A test case
-
Hannenhalli, S., Chappey, C., Koonin, E.V., and Pevzner, P.A. 1995. Genome sequence comparison and scenarios for gene rearrangements: a test case. Genomics 30, 299-311.
-
(1995)
Genomics
, vol.30
, pp. 299-311
-
-
Hannenhalli, S.1
Chappey, C.2
Koonin, E.V.3
Pevzner, P.A.4
-
17
-
-
84976632165
-
Exact and approximation algorithms for the inversion distance between two chromosomes
-
Apostolico, A., Crochemore, M., Galil, Z., and Manber, U., eds., Springer Verlag, New York
-
Kececioglu, J., and Sankoff, D. 1993. Exact and approximation algorithms for the inversion distance between two chromosomes, 87-105. In Apostolico, A., Crochemore, M., Galil, Z., and Manber, U., eds., Combinatorial Pattern Matching. 4th Annual Symposium. Lecture Notes in Computer Science 684, Springer Verlag, New York.
-
(1993)
Combinatorial Pattern Matching. 4th Annual Symposium. Lecture Notes in Computer Science
, vol.684
, pp. 87-105
-
-
Kececioglu, J.1
Sankoff, D.2
-
18
-
-
84896575459
-
Efficient bounds for oriented chromosome inversion distance
-
Crochemore, M., and Gusfield, D., eds., Springer Verlag, New York
-
Kececioglu, J., and Sankoff, D. 1994. Efficient bounds for oriented chromosome inversion distance, 307-325. In Crochemore, M., and Gusfield, D., eds., Combinatorial Pattern Matching. 5th Annual Symposium. Lecture Notes in Computer Science 807, Springer Verlag, New York.
-
(1994)
Combinatorial Pattern Matching. 5th Annual Symposium. Lecture Notes in Computer Science
, vol.807
, pp. 307-325
-
-
Kececioglu, J.1
Sankoff, D.2
-
19
-
-
0029185212
-
Exact and approximation algorithms for sorting by reversals, with application to genome rearrangement
-
Kececioglu, J., and Sankoff, D. 1995. Exact and approximation algorithms for sorting by reversals, with application to genome rearrangement. Algorithmica 13, 180-210.
-
(1995)
Algorithmica
, vol.13
, pp. 180-210
-
-
Kececioglu, J.1
Sankoff, D.2
-
24
-
-
34548377128
-
The early introduction of dynamic programming into computational biology
-
Vinet, L., ed., American Mathematical Society, Providence, RI
-
Sankoff, D. 1997. The early introduction of dynamic programming into computational biology, 403-413. In Vinet, L., ed., Advances in the Mathematical Sciences - CRM's 25 years. CRM Proceedings and Lecture Notes 11, American Mathematical Society, Providence, RI.
-
(1997)
Advances in the Mathematical Sciences - CRM's 25 Years. CRM Proceedings and Lecture Notes
, vol.11
, pp. 403-413
-
-
Sankoff, D.1
-
25
-
-
84947708594
-
The median problem for breakpoints in comparative genomics
-
Jiang, T., and Lee, D.T., eds., Springer Verlag, New York
-
Sankoff, D., and Blanchette, M. 1997. The median problem for breakpoints in comparative genomics, 251-263. In Jiang, T., and Lee, D.T., eds., Computing and Combinatorics, Proceedings of COCOON '97, Lecture Notes in Computer Science 1276, Springer Verlag, New York.
-
(1997)
Computing and Combinatorics, Proceedings of COCOON '97, Lecture Notes in Computer Science
, vol.1276
, pp. 251-263
-
-
Sankoff, D.1
Blanchette, M.2
-
26
-
-
0017293845
-
Frequency of insertion-deletion, transversion, and transition in the evolution of 5S ribosomal RNA
-
Sankoff, D., Cedergren, R.J., and Lapalme, G. 1976. Frequency of insertion-deletion, transversion, and transition in the evolution of 5S ribosomal RNA. J. Mol. Evol. 7, 133-149.
-
(1976)
J. Mol. Evol.
, vol.7
, pp. 133-149
-
-
Sankoff, D.1
Cedergren, R.J.2
Lapalme, G.3
-
27
-
-
0030700469
-
Conserved segment identification
-
Sankoff, D., Ferretti, V., and Nadeau, J.H. 1997. Conserved segment identification. Journal of Computational Biology 4, 559-565.
-
(1997)
Journal of Computational Biology
, vol.4
, pp. 559-565
-
-
Sankoff, D.1
Ferretti, V.2
Nadeau, J.H.3
-
28
-
-
0026680446
-
Gene order comparisons for phylogenetic inference: Evolution of the mitochondrial genome
-
Sankoff, D., Leduc, G., Antoine, N., Paquin, B., Lang, B.F., and Cedergren, R.J. 1992. Gene order comparisons for phylogenetic inference: Evolution of the mitochondrial genome. Proceedings of the National Academy of Sciences USA 89, 6575-6579.
-
(1992)
Proceedings of the National Academy of Sciences USA
, vol.89
, pp. 6575-6579
-
-
Sankoff, D.1
Leduc, G.2
Antoine, N.3
Paquin, B.4
Lang, B.F.5
Cedergren, R.J.6
-
29
-
-
0141666829
-
Evolution of 5S RNA and the non-randomness of base replacement
-
Sankoff, D., Morel, C., and Cedergren, R.J. 1973. Evolution of 5S RNA and the non-randomness of base replacement. Nature New Biology 245, 232-234.
-
(1973)
Nature New Biology
, vol.245
, pp. 232-234
-
-
Sankoff, D.1
Morel, C.2
Cedergren, R.J.3
-
30
-
-
0002378618
-
Steiner points in the space of genome rearrangements
-
Sankoff, D., Sundaram, G., and Kececioglu, J. 1996. Steiner points in the space of genome rearrangements. International Journal of the Foundations of Computer Science 7, 1-9.
-
(1996)
International Journal of the Foundations of Computer Science
, vol.7
, pp. 1-9
-
-
Sankoff, D.1
Sundaram, G.2
Kececioglu, J.3
-
31
-
-
0026891610
-
A local algorithm for DNA alignment with inversions
-
Schöniger, M., and Waterman, M.S. 1992. A local algorithm for DNA alignment with inversions. Bull. Math. Biol. 54, 521-536.
-
(1992)
Bull. Math. Biol.
, vol.54
, pp. 521-536
-
-
Schöniger, M.1
Waterman, M.S.2
-
33
-
-
85038542769
-
The transformation distance
-
Miyano, S., and Takagi, T., eds., Universal Academy Press, Tokyo
-
Varré, J.-S., Delahaye, J.-P., and Rivals, E. 1997. The transformation distance, 352-353. In Miyano, S., and Takagi, T., eds., Genome Informatics 1997, Universal Academy Press, Tokyo.
-
(1997)
Genome Informatics 1997
, pp. 352-353
-
-
Varré, J.-S.1
Delahaye, J.-P.2
Rivals, E.3
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