Quantitative characterization of quantum dot-labeled lambda phage for Escherichia coli detection

Biotechnology and Bioengineering

Volumn 104, Issue 6, 2009, Pages 1059-1067

  Yim, Peter B ^a   Clarke, Matthew L ^a   McKinstry, Michael ^b   De Paoli Lacerda, Silvia H ^a   Pease III, Leonard F ^a,c   Dobrovolskaia, Marina A ^d   Kang, HyeongGon ^a   Read, Timothy D ^e   Sozhamannan, Shanmuga ^b   Hwang, Jeeseong ^a  

^a NATIONAL INSTITUTE OF STANDARDS AND TECHNOLOGY   (United States)

^b NAVAL MEDICAL RESEARCH CENTER   (United States)

^c Department of Electrical and Computer Engineering   (United States)

^d NATIONAL CANCER INSTITUTE   (United States)

^e EMORY UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Bacteria detection; Electron spray differential mobility assay; Fluorescence; Microscopy; Nanocrystal; Phage

Indexed keywords

BACTERIA DETECTION; BACTERIAL DETECTION; CDSE/ZNS; CYTOMETRY; DIFFERENTIAL MOBILITY ANALYSIS; ELECTROSPRAYS; FLUORESCENT LABELING; FLUORESCENT NANOCRYSTALS; GENETICALLY MODIFIED; IMAGE-BASED; MICROSCOPY; PHAGE; QUANTITATIVE CHARACTERIZATION; QUANTUM DOT; QUANTUM DOTS; VALIDATED METHODS;

BACTERIOLOGY; BACTERIOPHAGES; ESCHERICHIA COLI; FLUORESCENCE; NANOCRYSTALS; TRANSMISSION ELECTRON MICROSCOPY;

SEMICONDUCTOR QUANTUM DOTS;

NANOCRYSTAL; QUANTUM DOT;

ARTICLE; BACTERIOPHAGE LAMBDA; BACTERIUM DETECTION; BINDING AFFINITY; CONTROLLED STUDY; DNA MODIFICATION; ELECTROSPRAY; ESCHERICHIA COLI; FLOW CYTOMETRY; NONHUMAN; TRANSMISSION ELECTRON MICROSCOPY;

AMINO ACID SEQUENCE; BACTERIOPHAGE LAMBDA; BASE SEQUENCE; CAPSID PROTEINS; ESCHERICHIA COLI; FLOW CYTOMETRY; FLUORESCENCE; MICROSCOPY, ELECTRON, TRANSMISSION; MOLECULAR SEQUENCE DATA; QUANTUM DOTS; STAINING AND LABELING; VIRUS ATTACHMENT;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; MIRIDAE;

EID: 70350489221     PISSN: 00063592     EISSN: 10970290     Source Type: Journal    
DOI: 10.1002/bit.22488     Document Type: Article

References (31)

1. Alivisatos AP. 1996. Semiconductor clusters, nanocrystals, and quantum dots. Science 271(5251):933-937. (Pubitemid 126554899)
2. Carpenter AE, Jones TR, Lamprecht MR, Clarke C, Kang IH, Friman O, Guertin DA, Chang JH, Lindquist RA, Moffat J, Golland P, Sabatini DM. 2006. Cellprofiler: Image analysis software for identifying and quantifying cell phenotypes. Genome Biol 7(10):R100. (Pubitemid 46453508)
3. Chan WCW, Nie SM. 1998. Quantum dot bioconjugates for ultrasensitive nonisotopic detection. Science 281(5385):2016-2018.
4. Cui BX, Wu CB, Chen L, Ramirez A, Bearer EL, Li WP, Mobley WC, Chu S. 2007. One at a time, live tracking of NGF axonal transport using quantum dots. Proc Natl Acad Sci USA 104(34):13666-13671. (Pubitemid 350003378)
5. Dubertret B, Skourides P, Norris DJ, Noireaux V, Brivanlou AH, Libchaber A. 2002. In vivo imaging of quantum dots encapsulated in phospholipid micelles. Science 298(5599):1759-1762.
6. Edgar R, McKinstry M, Hwang J, Oppenheim AB, Fekete RA, Giulian G, Merril C, Nagashima K, Adhya S. 2006. High-sensitivity bacterial detection using biotin-tagged phage and quantum-dot nanocomplexes. Proc Natl Acad Sci USA 103(13):4841-4845.
7. Empedocles SA, Norris DJ, Bawendi MG. 1996. Photoluminescence spectroscopy of single CdSe nanocrystallite quantum dots. Phys Rev Lett 77(18):3873-3876. (Pubitemid 126624404)
8. Fischer BJ. 2002. Particle convection in an evaporating colloidal droplet. Langmuir 18(1):60-67.
9. Gibbs KA, Isaac DD, Xu J, Hendrix RW, Silhavy TJ, Theriot JA. 2004. Complex spatial distribution and dynamics of an abundant Escherichia coli outer membrane protein, LamB. Mol Microbiol 53(6):1771-1783. (Pubitemid 39265321)
10. Giepmans BNG. 2008. Bridging fluorescence microscopy and electron microscopy. Histochem Cell Biol 130(2):211-217.
11. Goodridge L, Chen JR, Griffiths M. 1999. Development and characterization of a fluorescent-bacteriophage assay for detection of Escherichia coli O157: H7. Appl Environ Microbiol 65(4):1397-1404. (Pubitemid 29173662)
12. Gupta A, Onda M, Pastan I, Adhya S, Chaudhary VK. 2003. High-density functional display of proteins on bacteriophage lambda. J Mol Biol 334(2):241-254. (Pubitemid 37357264)
13. Hahn MA, Tabb JS, Krauss TD. 2005. Detection of single bacterial pathogens with semiconductor quantum dots. Anal Chem 77(15):4861-4869. (Pubitemid 41076677)
14. Hahn MA, Keng PC, Krauss TD. 2008. Flow cytometric analysis to detect pathogens in bacterial cell mixtures using semiconductor quantum dots. Anal Chem 80(3):864-872.
15. Krogmeier JR, Hwang J. 2005. Data analysis considerations in probing single quantum dot fluorescence intermittency. Proc SPIE Int Soc Opt Eng 5705:255-262. (Pubitemid 41091430)
16. Krogmeier JR, Kang H, Clarke ML, Yim P, Hwang J. 2008. Probing the dynamic fluorescence properties of single water-soluble quantum dots. Opt Commun 281(7):1781-1788.
17. Mosier-Boss PA, Lieberman SH, Andrews JM, Rohwer FL, Wegley LE, Breitbart M. 2003. Use of fluorescently labeled phage in the detection and identification of bacterial species. Appl Spectrosc 57(9):1138-1144.
18. Mulholland GW, Donnelly MK, Hagwood CR, Kukuck SR, Hackley VA, Pui DYH. 2006. Measurement of 100nm and 60nm particle standards by differential mobility analysis. J Res Natl Inst Stand Tech 111(4):257-312.
19. Murphy KC. 1998. Use of bacteriophage lambda recombination functions to promote gene replacement in Escherichia coli. J Bacteriol 180(8):2063-2071.
20. Murray NE, Gann A. 2007. What has phage lambda ever done for us? Curr Biol 17(9):R305-R312.
21. Oda M, Morita M, Unno H, Tanji Y. 2004. Rapid detection of Escherichia coli O157: H7 by using green fluorescent protein-labeled PP01 bacteriophage. Appl Environ Microbiol 70(1):527-534. (Pubitemid 38090246)
22. Pease LF, Tsai DH, Zangmeister RA, Zachariah MR, Tarlov MJ. 2007. Quantifying the surface coverage of conjugate molecules on functionalized nanoparticles. J Phys Chem C 111(46):17155-17157.
23. Pease LF, Elliott JT, Tsai DH, Zachariah MR, Tarlov MJ. 2008. Determination of protein aggregation with differential mobility analysis: Application to IgG antibody. Biotechnol Bioeng 101(6):1214-1222.
24. Pomerantsev AP, Sitaraman R, Galloway CR, Kivovich V, Leppla SH. 2006. Genome engineering in Bacillus anthracis using Cre recombinase. Infect Immun 74(1):682-693. (Pubitemid 43023124)
25. Resch-Genger U, Grabolle M, Cavaliere-Jaricot S, Nitschke R, Nann T. 2008. Quantum dots versus organic dyes as fluorescent labels. Nat Methods 5(9):763-775.
26. Schuch R, Nelson D, Fischetti VA. 2002. A bacteriolytic agent that detects and kills Bacillus anthracis. Nature 418(6900):884-889. (Pubitemid 34966308)
27. Waite-Rees PA, Keating CJ, Moran LS, Slatko BE, Hornstra LJ, Benner JS. 1991. Characterization and expression of the Escherichia coli Mrr restriction system. J Bacteriol 173(16):5207-5219.
28. Wiedensohler A. 1988. An approximation of the bipolar charge-distribution for particles in the sub-micron size range. J Aerosol Sci 19(3):387-389. (Pubitemid 18649043)
29. Yamaguchi N, Sasada M, Yamanaka M, Nasu M. 2003. Rapid detection of respiring Escherichia coli. O157: H7 in apple juice, milk, and ground beef by flo cytometry. Cytom Part A 54(1):27-35.
30. Yim P, Dobrovolskaia M, Kang H, Clarke M, Patri A, Hwang J. 2007. Nanocrystal-based biomimetic system for quantitative flow cytometry. Proc SPIE Int Soc Opt Eng 6430:64301T. (Pubitemid 46641050)
31. Zanghi CN, Lankes HA, Bradel-Tretheway B, Wegman J, Dewhurst S. 2005. A simple method for displaying recalcitrant proteins on the surface of bacteriophage lambda. Nucleic Acids Res 33(18):e160. (Pubitemid 41742636)