Diagnostics and discovery in viral hemorrhagic fevers

Annals of the New York Academy of Sciences

Volumn 1171, Issue SUPPL. 1, 2009, Pages

  Lipkin, W Ian ^a   Palacios, Gustavo ^a   Briese, Thomas ^a  

^a Department of Medicine   (United States)

Author keywords

biology; epidemiology; virus

Indexed keywords

ANTIVIRAL THERAPY; DIAGNOSTIC PROCEDURE; DISEASE COURSE; EPIDEMIC; HEMORRHAGIC FEVER; HIGH THROUGHPUT SCREENING; HUMAN; MICROARRAY ANALYSIS; NIPAH VIRUS; NONHUMAN; POLYMERASE CHAIN REACTION; REVIEW; SEVERE ACUTE RESPIRATORY SYNDROME; SIN NOMBRE VIRUS; VIRUS INFECTION; VIRUS VIRULENCE; WEST NILE FLAVIVIRUS; ANIMAL; ARTICLE; BAT; DISEASE TRANSMISSION; IMMUNOLOGY; PRIMATE; VIROLOGY; VIRUS HEMORRHAGIC FEVER;

VIRUS VACCINE;

ANIMALS; ARENAVIRIDAE INFECTIONS; CHIROPTERA; FILOVIRIDAE INFECTIONS; HEMORRHAGIC FEVER, EBOLA; HEMORRHAGIC FEVERS, VIRAL; HUMANS; PRIMATES; VIRAL VACCINES;

EID: 70350462005     PISSN: 00778923     EISSN: 17496632     Source Type: Book Series    
DOI: 10.1111/j.1749-6632.2009.05056.x     Document Type: Review

References (39)

1. Morse, S.S. 1995. Factors in the emergence of infectious diseases. Emerg. Infect. Dis. 1: 7-15.
2. Briese, T., G. Palacios, M. Kokoris, et al. 2005. Diagnostic system for rapid and sensitive differential detection of pathogens. Emerg. Infect. Dis. 11: 310-313.
3. Palacios, G., T. Briese, V. Kapoor, et al. 2006. MassTag polymerase chain reaction for differential diagnosis of viral hemorrhagic fever. Emerg. Infect. Dis. 12: 692-695.
4. Lamson, D., N. Renwick, V. Kapoor, et al. 2006. MassTag polymerase-chain-reaction detection of respiratory pathogens, including a new rhinovirus genotype, that caused influenza-like illness in New York State during 2004-2005. J. Infect. Dis. 194: 1398-1402.
5. Renwick, N., B. Schweiger, V. Kapoor, et al. 2007. A recently identified rhinovirus genotype is associated with severe respiratory-tract infection in children in Germany. J. Infect. Dis. 196: 1754-1760.
6. Wang, D., L. Coscoy, M. Zylberberg, et al. 2002. Microarray-based detection and genotyping of viral pathogens. Proc. Natl. Acad. Sci. USA 99: 15687-15692.
7. Chiu, C.Y., S. Rouskin, A. Koshy, et al. 2006. Microarray detection of human parainfluenzavirus 4 infection associated with respiratory failure in an immunocompetent adult. Clin. Infect. Dis. 43: e71-e76.
8. Palacios, G., P.L. Quan, O.J. Jabado, et al. 2007. Panmicrobial oligonucleotide array for diagnosis of infectious diseases. Emerg. Infect. Dis. 13: 73-81.
9. Cox-Foster,D.L., S. Conlan,E.C.Holmes, et al. 2007. A metagenomic survey of microbes in honey bee colony collapse disorder. Science 318: 283-287.
10. Deem, S., W. Karesh, W. Weisman. 2001. Putting theory into practice: wildlife health in conservation. Conservation Biology 15: 1224-1233.
11. Wolfe,N.D.,W.Heneine, J.K. Carr, et al. 2005. Emergence of unique primate T-lymphotropic viruses among central African bushmeat hunters. Proc. Natl. Acad. Sci. USA. 102: 7994-7999.
12. Jones, K.E.,N.G. Patel, M.A. Levy, et al. 2008. Global trends in emerging infectious diseases. Nature 451: 990-993.
13. Koch,R. 1981. Ueber bakteriologische Forschung, Verhandl. August Hischwald. Berlin. pp. 35.
14. Chizhikov, V.E., C.F. Spiropoulou, S.P. Morzunov, et al. 1995. Complete genetic characterization and analysis of isolation of Sin Nombre virus. J. Virol. 69: 8132-8136.
15. Paton, N.I., Y.S. Leo, S.R. Zaki, et al. 1999. Outbreak of Nipah-virus infection among abattoir workers in Singapore. Lancet 354: 1253-1256.
16. Briese, T., X.Y. Jia, C. Huang, et al. 1999. Identification of a Kunjin/West Nile-like flavivirus in brains of patients with New York encephalitis. Lancet 354: 1261-1262.
17. Lanciotti, R.S., J.T. Roehrig, V. Deubel, et al. 1999. Origin of the West Nile virus responsible for an outbreak of encephalitis in the northeastern United States. Science 286: 2333-2337.
18. Shieh, W.J., J. Guarner, M. Layton, et al. 2000. The role of pathology in an investigation of an outbreak of West Nile encephalitis in New York, 1999. Emerg. Infect. Dis. 6: 370-372.
19. Steele, K.E., M.J. Linn, R.J. Schoepp, et al. 2000. Pathology of fatalWest Nile virus infections in native and exotic birds during the 1999 outbreak in New York City, New York. Vet. Pathol. 37: 208-224.
20. Briese, T., J.T. Paweska, L.K. McMullan, et al. 2009. Genetic detection and characterization of lujo virus, a new hemorrhagic Fever-associated arenavirus from southern Africa. PLoS Pathog. 5: e1000455.
21. Peiris, J.S., S.T. Lai, L.L. Poon, et al. 2003. Coronavirus as a possible cause of severe acute respiratory syndrome. Lancet 361: 1319-1325.
22. Challoner, P.B., K.T. Smith, J.D. Parker, et al. 1995. Plaque-associated expression of human herpesvirus 6 in multiple sclerosis. Proc. Natl. Acad. Sci. USA 92: 7440-7444.
23. Chang, Y., E. Cesarman, M.S. Pessin, et al. 1994. Identification of herpesvirus-like DNA sequences in AIDS-associated Kaposi's sarcoma. Science 266: 1865-1869.
24. Choo,Q.L.,G.Kuo, A.J.Weiner, et al. 1989. Isolation of a cDNA clone derived from a blood-borne non- A, non-B viral hepatitis genome. Science 244: 359-362.
25. Lipkin, W.I., G.H. Travis, K.M. Carbone & M.C. Wilson. 1990. Isolation and characterization of Borna disease agent cDNA clones. Proc. Natl. Acad. Sci. USA 87: 4184-4188.
26. Nichol, S.T., C.F. Spiropoulou, S. Morzunov, et al. 1993. Genetic identification of a hantavirus associated with an outbreak of acute respiratory illness. Science 262: 914-917.
27. Relman, D.A., J.S. Loutit, T.M. Schmidt, et al. 1990. The agent of bacillary angiomatosis. An approach to the identification of uncultured pathogens. N. Engl. J. Med. 323: 1573-1580.
28. Relman, D.A., T.M. Schmidt, R.P.MacDermott & S. Falkow. 1992. Identification of the uncultured bacillus of Whipple's disease. N. Engl. J. Med. 327: 293-301.
29. VandeWoude, S., J.A. Richt, M.C. Zink, et al. 1990. A borna virus cDNA encoding a protein recognized by antibodies in humans with behavioral diseases. Science 250: 1278-1281.
30. Hofstadler, S.A., K.A. Sannes-Lowery&J.C.Hannis. 2005. Analysis of nucleic acids by FTICR MS. Mass. Spectrom. Rev. 24: 265-285.
31. Sampath, R., T.A. Hall, C. Massire, et al. 2007. Rapid identification of emerging infectious agents using PCR and electrospray ionization mass spectrometry. Ann. N. Y. Acad. Sci. 1102: 109-120.
32. Tokarz, R., V. Kapoor, J.E. Samuel, et al. 2009. Detection of tick-borne pathogens by MassTag polymerase chain reaction. Vector. Borne. Zoonotic. Dis. 9: 147-152.
33. Lin, B., K.M. Blaney, A.P. Malanoski, et al. 2007. Using a resequencing microarray as a multiple respiratory pathogen detection assay. J. Clin.Microbiol. 45: 443-452.
34. Quan, P.L., G. Palacios, O.J. Jabado, et al. 2007. Detection of respiratory viruses and subtype identification of influenza A viruses by GreeneChipResp oligonucleotide microarray. J. Clin. Microbiol. 45: 2359-2364.
35. Kapoor, A., J. Victoria, P. Simmonds, et al. 2008. A highly prevalent and genetically diversified Picornaviridae genus in South Asian children. Proc. Natl. Acad. Sci. USA 105: 20482-20487.
36. Victoria, J.G., A. Kapoor, K. Dupuis, et al. 2008. Rapid identification of known and new RNA viruses from animal tissues. PLoS Pathog. 4: e1000163.
37. Kapoor, A., J. Victoria, P. Simmonds, et al. 2008. A highly divergent picornavirus in a marine mammal. J. Virol. 82: 311-320.
38. Finkbeiner, S.R., A.F. Allred, P.I. Tarr, et al. 2008. Metagenomic analysis of human diarrhea: viral detection and discovery. PLoS Pathog. 4: e1000011.
39. Towner, J.S., T.K. Sealy, M.L. Khristova, et al. 2008. Newly discovered ebola virus associated with hemorrhagic fever outbreak in Uganda. PLoS Pathog. 4: e1000212.