Erc-group Microflex: Microbiology of dehalococcoides-like chloroflexi

Reviews in Environmental Science and Biotechnology

Volumn 8, Issue 3, 2009, Pages 225-229

  Adrian, Lorenz ^a  

^a HELMHOLTZ CENTRE FOR ENVIRONMENTAL RESEARCH UFZ   (Germany)

Author keywords

Anaerobic bacteria; Marine sediments; Reductive dehalogenation

Indexed keywords

BACTERIA (MICROORGANISMS); CHLOROFLEXI; CHLOROFLEXI (CLASS); DEHALOCOCCOIDES;

EID: 70350273080     PISSN: 15691705     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11157-009-9166-y     Document Type: Article

References (18)

1. Adrian L, Szewzyk U, Wecke U, Görisch H (2000) Bacterial dehalorespiration with chlorinated benzenes. Nature 408:580-583.
2. Adrian L, Hansen SK, Fung JM, Görisch H, Zinder SH (2007) Growth of Dehalococcoides strains with chlorophenols as electron acceptors. Environ Sci Technol 41:2318-2323.
3. Adrian L, Duková V, Demnerová K, Bedard DL (2009) Dehalococcoides strain CBDB1 extensively dechlorinates the commercial polychlorinated biphenyl (PCB) mixture Aroclor 1260. Appl Environ Microbiol 75:4516-4524.
4. Biddle JF, Lipp JS, Lever MA, Lloyd KG, Sørensen KB, Anderson R, Fredricks HF, Elvert M, Kelly TJ, Schrag DP, Sogin ML, Brenchley JE, Teske A, House CH, Hinrichs K-U (2006) Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru. Proc Natl Acad Sci USA 103:3846-3851.
5. Bunge M, Adrian L, Kraus A, Opel M, Lorenz WG, Andreesen JR, Görisch H, Lechner U (2003) Reductive dehalogenation of chlorinated dioxins by an anaerobic bacterium. Nature 421:357-360.
6. Coolen MJL, Cypionka H, Sass AM, Sass A, Overmann J (2002) Ongoing modification of Mediterranean pleistocene sapropels mediated by prokaryotes. Science 296:2407-2410.
7. Dang H, Li J, Chen M, Li T, Zeng Z, Yin X (2009) Pine-scale vertical distribution of bacteria in the East Pacific deep-sea sediments determined via 16S rRNA gene T-RFLP and clone library analyses. World J Microbiol Biotechnol 25:179-188.
8. Fennell DE, Nijenhuis I, Wilson SF, Zinder SH, Häggblom MM (2004) Dehalococcoides ethenogenes strain 195 reductively dechlorinates diverse chlorinated aromatic pollutants. Environ Sci Technol 38:2075-2081.
9. He J, Ritalahti KM, Yang KL, Koenigsberg SS, Löffler FE (2003) Detoxification of vinyl chloride to ethene coupled to growth of an anaerobic bacterium. Nature 424:62-65.
10. Inagaki F, Suzuki M, Takai K, Oida H, Sakamoto T, Aoki K, Nealson KH, Horikoshi K (2003) Microbial communities associated with geological horizons in coastal subseafloor sediments from the Sea of Okhotsk. Appl Environ Microbiol 69:7224-7235.
11. Inagaki F, Nunoura T, Nakagawa S, Teske A, Lever M, Lauer A, Suzuki M, Takai K, Delwiche M, Colwell FS, Nealson KH, Horikoshi K, D′Hondt S (2006) Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin. Proc Natl Acad Sci USA 103:2815-2820.
12. Kube M, Beck A, Zinder SH, Kuhl H, Reinhardt R, Adrian L (2005) Genome sequence of the chlorinated compound-respiring bacterium Dehalococcoides species strain CBDB1. Nat Biotechnol 23:1269-1273.
13. May HD, Miller GS, Kjellerup BV, Sowers KR (2008) Dehalorespiration with polychlorinated biphenyls by an anaerobic ultramicrobacterium. Appl Environ Microbiol 74:2089-2094.
14. Maymó-Gatell X, Chien Y-T, Gossett JM, Zinder SH (1997) Isolation of a bacterium that reductively dechlorinates tetrachloroethene to ethene. Science 276:1568-1571.
15. Sekiguchi Y, Yamada T, Hanada S, Ohashi A, Harada H, Kamagata Y (2003) Anaerolinea thermophila gen. nov., sp. nov. and Caldilinea aerophila gen. nov., sp. nov., novel filamentous thermophiles that represent a previously uncultured lineage of the domain Bacteria at the subphylum level. Int J Syst Evol Microbiol 53:1843-1851.
16. Seshadri R, Adrian L, Fouts DE, Eisen JA, Phillippy AM, Methe BA, Ward NL, Nelson WC, Deboy RT, Khouri HM, Kolonay JF, Dodson RJ, Daugherty SC, Brinkac LM, Sullivan SA, Madupu R, Nelson KT, Kang KH, Impraim M, Tran K, Robinson JM, Forberger HA, Fraser CM, Zinder SH, Heidelberg JF (2005) Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes. Science 307:105-108.
17. Willms R, Sass H, Köpke B, Köster J, Cypionka H, Engelen B (2006) Specific bacterial, archaeal, and eukaryotic communities in tidal-flat sediments along a vertical profile of several meters. Appl Environ Microbiol 72:2756-2764.
18. Yan J, Rash BA, Rainey FA, Moe WM (2009) Isolation of novel bacteria within the Chloroflexi capable of reductive dechlorination of 1,2,3-trichloropropane. Environ Microbiol 11:833-843.