-
1
-
-
33845330910
-
Replisome assembly and the direct restart of stalled replication forks
-
Heller R.C., and Marians K.J. Replisome assembly and the direct restart of stalled replication forks. Nat. Rev. Mol. Cell Biol. 7 (2006) 932-943
-
(2006)
Nat. Rev. Mol. Cell Biol.
, vol.7
, pp. 932-943
-
-
Heller, R.C.1
Marians, K.J.2
-
2
-
-
0037222240
-
Strategies for helicase recruitment and loading in bacteria
-
Konieczny I. Strategies for helicase recruitment and loading in bacteria. EMBO Rep. 4 (2003) 37-41
-
(2003)
EMBO Rep.
, vol.4
, pp. 37-41
-
-
Konieczny, I.1
-
3
-
-
0023766613
-
A model for initiation at origins of DNA replication
-
Bramhill D., and Kornberg A. A model for initiation at origins of DNA replication. Cell 54 (1988) 915-918
-
(1988)
Cell
, vol.54
, pp. 915-918
-
-
Bramhill, D.1
Kornberg, A.2
-
4
-
-
0021720088
-
The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites
-
Fuller R.S., Funnell B.E., and Kornberg A. The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites. Cell 38 (1984) 889-900
-
(1984)
Cell
, vol.38
, pp. 889-900
-
-
Fuller, R.S.1
Funnell, B.E.2
Kornberg, A.3
-
5
-
-
0024284091
-
Duplex opening by dnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome
-
Bramhill D., and Kornberg A. Duplex opening by dnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome. Cell 52 (1988) 743-755
-
(1988)
Cell
, vol.52
, pp. 743-755
-
-
Bramhill, D.1
Kornberg, A.2
-
6
-
-
0028102357
-
DnaA protein directs the binding of DnaB protein in initiation of DNA replication in Escherichia coli
-
Marszalek J., and Kaguni J.M. DnaA protein directs the binding of DnaB protein in initiation of DNA replication in Escherichia coli. J. Biol. Chem. 269 (1994) 4883-4890
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 4883-4890
-
-
Marszalek, J.1
Kaguni, J.M.2
-
7
-
-
0033988501
-
Role of PriA in replication fork reactivation in Escherichia coli
-
Sandler S.J., and Marians K.J. Role of PriA in replication fork reactivation in Escherichia coli. J. Bacteriol. 182 (2000) 9-13
-
(2000)
J. Bacteriol.
, vol.182
, pp. 9-13
-
-
Sandler, S.J.1
Marians, K.J.2
-
8
-
-
0025876111
-
Fine balance in the regulation of DnaB helicase by DnaC protein in replication in Escherichia coli
-
Allen Jr. G.C., and Kornberg A. Fine balance in the regulation of DnaB helicase by DnaC protein in replication in Escherichia coli. J. Biol. Chem. 266 (1991) 22096-22101
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 22096-22101
-
-
Allen Jr., G.C.1
Kornberg, A.2
-
9
-
-
0023046634
-
Extensive unwinding of the plasmid template during staged enzymatic initiation of DNA replication from the origin of the Escherichia coli chromosome
-
Baker T.A., Sekimizu K., Funnell B.E., and Kornberg A. Extensive unwinding of the plasmid template during staged enzymatic initiation of DNA replication from the origin of the Escherichia coli chromosome. Cell 45 (1986) 53-64
-
(1986)
Cell
, vol.45
, pp. 53-64
-
-
Baker, T.A.1
Sekimizu, K.2
Funnell, B.E.3
Kornberg, A.4
-
10
-
-
0022977660
-
The Escherichia coli dnaB replication protein is a DNA helicase
-
LeBowitz J.H., and McMacken R. The Escherichia coli dnaB replication protein is a DNA helicase. J. Biol. Chem. 261 (1986) 4738-4748
-
(1986)
J. Biol. Chem.
, vol.261
, pp. 4738-4748
-
-
LeBowitz, J.H.1
McMacken, R.2
-
11
-
-
34548638261
-
Structure and mechanism of helicases and nucleic acid translocases
-
Singleton M.R., Dillingham M.S., and Wigley D.B. Structure and mechanism of helicases and nucleic acid translocases. Annu. Rev. Biochem. 76 (2007) 23-50
-
(2007)
Annu. Rev. Biochem.
, vol.76
, pp. 23-50
-
-
Singleton, M.R.1
Dillingham, M.S.2
Wigley, D.B.3
-
12
-
-
0024562458
-
The dnaB-dnaC replication protein complex of Escherichia coli. I. Formation and properties
-
Wahle E., Lasken R.S., and Kornberg A. The dnaB-dnaC replication protein complex of Escherichia coli. I. Formation and properties. J. Biol. Chem. 264 (1989) 2463-2468
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 2463-2468
-
-
Wahle, E.1
Lasken, R.S.2
Kornberg, A.3
-
13
-
-
0023654911
-
Helicase action of dnaB protein during replication from the Escherichia coli chromosomal origin in vitro
-
Baker T.A., Funnell B.E., and Kornberg A. Helicase action of dnaB protein during replication from the Escherichia coli chromosomal origin in vitro. J. Biol. Chem. 262 (1987) 6877-6885
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 6877-6885
-
-
Baker, T.A.1
Funnell, B.E.2
Kornberg, A.3
-
14
-
-
0023664708
-
In vitro assembly of a prepriming complex at the origin of the Escherichia coli chromosome
-
Funnell B.E., Baker T.A., and Kornberg A. In vitro assembly of a prepriming complex at the origin of the Escherichia coli chromosome. J. Biol. Chem. 262 (1987) 10327-10334
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 10327-10334
-
-
Funnell, B.E.1
Baker, T.A.2
Kornberg, A.3
-
15
-
-
0032958074
-
Regulation of initiation of Bacillus subtilis chromosome replication
-
Moriya S., Imai Y., Hassan A.K., and Ogasawara N. Regulation of initiation of Bacillus subtilis chromosome replication. Plasmid 41 (1999) 17-29
-
(1999)
Plasmid
, vol.41
, pp. 17-29
-
-
Moriya, S.1
Imai, Y.2
Hassan, A.K.3
Ogasawara, N.4
-
16
-
-
0035824676
-
Early steps of Bacillus subtilis primosome assembly
-
Marsin S., McGovern S., Ehrlich S.D., Bruand C., and Polard P. Early steps of Bacillus subtilis primosome assembly. J. Biol. Chem. 276 (2001) 45818-45825
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 45818-45825
-
-
Marsin, S.1
McGovern, S.2
Ehrlich, S.D.3
Bruand, C.4
Polard, P.5
-
17
-
-
0029003406
-
Primosome assembly site in Bacillus subtilis
-
Bruand C., Ehrlich S.D., and Janniere L. Primosome assembly site in Bacillus subtilis. EMBO J. 14 (1995) 2642-2650
-
(1995)
EMBO J.
, vol.14
, pp. 2642-2650
-
-
Bruand, C.1
Ehrlich, S.D.2
Janniere, L.3
-
18
-
-
0035725265
-
DnaB, DnaD and DnaI proteins are components of the Bacillus subtilis replication restart primosome
-
Bruand C., Farache M., McGovern S., Ehrlich S.D., and Polard P. DnaB, DnaD and DnaI proteins are components of the Bacillus subtilis replication restart primosome. Mol. Microbiol. 42 (2001) 245-255
-
(2001)
Mol. Microbiol.
, vol.42
, pp. 245-255
-
-
Bruand, C.1
Farache, M.2
McGovern, S.3
Ehrlich, S.D.4
Polard, P.5
-
19
-
-
0020405207
-
The Escherichia coli dnaC gene product. III. Properties of the dnaB-dnaC protein complex
-
Kobori J.A., and Kornberg A. The Escherichia coli dnaC gene product. III. Properties of the dnaB-dnaC protein complex. J. Biol. Chem. 257 (1982) 13770-13775
-
(1982)
J. Biol. Chem.
, vol.257
, pp. 13770-13775
-
-
Kobori, J.A.1
Kornberg, A.2
-
20
-
-
0037124375
-
The DnaC helicase loader is a dual ATP/ADP switch protein
-
Davey M.J., Fang L., McInerney P., Georgescu R.E., and O'Donnell M. The DnaC helicase loader is a dual ATP/ADP switch protein. EMBO J. 21 (2002) 3148-3159
-
(2002)
EMBO J.
, vol.21
, pp. 3148-3159
-
-
Davey, M.J.1
Fang, L.2
McInerney, P.3
Georgescu, R.E.4
O'Donnell, M.5
-
21
-
-
0037082430
-
A functional interaction between the putative primosomal protein DnaI and the main replicative DNA helicase DnaB in Bacillus
-
Soultanas P. A functional interaction between the putative primosomal protein DnaI and the main replicative DNA helicase DnaB in Bacillus. Nucleic Acids Res. 30 (2002) 966-974
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 966-974
-
-
Soultanas, P.1
-
22
-
-
0038637844
-
A two-protein strategy for the functional loading of a cellular replicative DNA helicase
-
Velten M., McGovern S., Marsin S., Ehrlich S.D., Noirot P., and Polard P. A two-protein strategy for the functional loading of a cellular replicative DNA helicase. Mol. Cell 11 (2003) 1009-1020
-
(2003)
Mol. Cell
, vol.11
, pp. 1009-1020
-
-
Velten, M.1
McGovern, S.2
Marsin, S.3
Ehrlich, S.D.4
Noirot, P.5
Polard, P.6
-
23
-
-
0035108406
-
DnaD protein of Bacillus subtilis interacts with DnaA, the initiator protein of replication
-
Ishigo-Oka D., Ogasawara N., and Moriya S. DnaD protein of Bacillus subtilis interacts with DnaA, the initiator protein of replication. J. Bacteriol. 183 (2001) 2148-2150
-
(2001)
J. Bacteriol.
, vol.183
, pp. 2148-2150
-
-
Ishigo-Oka, D.1
Ogasawara, N.2
Moriya, S.3
-
24
-
-
33750983641
-
Helicase binding to DnaI exposes a cryptic DNA-binding site during helicase loading in Bacillus subtilis
-
Ioannou C., Schaeffer P.M., Dixon N.E., and Soultanas P. Helicase binding to DnaI exposes a cryptic DNA-binding site during helicase loading in Bacillus subtilis. Nucleic Acids Res. 34 (2006) 5247-5258
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 5247-5258
-
-
Ioannou, C.1
Schaeffer, P.M.2
Dixon, N.E.3
Soultanas, P.4
-
25
-
-
65549151818
-
A novel zinc-binding fold in the helicase interaction domain of the Bacillus subtilis DnaI helicase loader
-
Loscha K.V., Jaudzems K., Ioannou C., Su X.C., Hill F.R., Otting G., et al. A novel zinc-binding fold in the helicase interaction domain of the Bacillus subtilis DnaI helicase loader. Nuclear Acids Res. 37 (2009) 2395-2404
-
(2009)
Nuclear Acids Res.
, vol.37
, pp. 2395-2404
-
-
Loscha, K.V.1
Jaudzems, K.2
Ioannou, C.3
Su, X.C.4
Hill, F.R.5
Otting, G.6
-
26
-
-
0034033766
-
Subcellular localization of Dna-initiation proteins of Bacillus subtilis: evidence that chromosome replication begins at either edge of the nucleoids
-
Imai Y., Ogasawara N., Ishigo-Oka D., Kadoya R., Daito T., and Moriya S. Subcellular localization of Dna-initiation proteins of Bacillus subtilis: evidence that chromosome replication begins at either edge of the nucleoids. Mol. Microbiol. 36 (2000) 1037-1048
-
(2000)
Mol. Microbiol.
, vol.36
, pp. 1037-1048
-
-
Imai, Y.1
Ogasawara, N.2
Ishigo-Oka, D.3
Kadoya, R.4
Daito, T.5
Moriya, S.6
-
27
-
-
0037062435
-
An expanded view of bacterial DNA replication
-
Noirot-Gros M.F., Dervyn E., Wu L.J., Mervelet P., Errington J., Ehrlich S.D., and Noirot P. An expanded view of bacterial DNA replication. Proc. Natl. Acad. Sci. USA 99 (2002) 8342-8347
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 8342-8347
-
-
Noirot-Gros, M.F.1
Dervyn, E.2
Wu, L.J.3
Mervelet, P.4
Errington, J.5
Ehrlich, S.D.6
Noirot, P.7
-
28
-
-
12744268746
-
Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus
-
Takami H., Takaki Y., Chee G.J., Nishi S., Shimamura S., Suzuki H., et al. Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus. Nucleic Acids Res. 32 (2004) 6292-6303
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 6292-6303
-
-
Takami, H.1
Takaki, Y.2
Chee, G.J.3
Nishi, S.4
Shimamura, S.5
Suzuki, H.6
-
29
-
-
38149021418
-
Structure of Arabidopsis thaliana 5-methylthioribose kinase reveals a more occluded active site than its bacterial homolog
-
Ku S.Y., Cornell K.A., and Howell P.L. Structure of Arabidopsis thaliana 5-methylthioribose kinase reveals a more occluded active site than its bacterial homolog. BMC Struct. Biol. 7 (2007) 70
-
(2007)
BMC Struct. Biol.
, vol.7
, pp. 70
-
-
Ku, S.Y.1
Cornell, K.A.2
Howell, P.L.3
-
30
-
-
0030666224
-
Crystal structure of the delta' subunit of the clamp-loader complex of E. coli DNA polymerase III
-
Guenther B., Onrust R., Sali A., O'Donnell M., and Kuriyan J. Crystal structure of the delta' subunit of the clamp-loader complex of E. coli DNA polymerase III. Cell 91 (1997) 335-345
-
(1997)
Cell
, vol.91
, pp. 335-345
-
-
Guenther, B.1
Onrust, R.2
Sali, A.3
O'Donnell, M.4
Kuriyan, J.5
-
31
-
-
33746860263
-
Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling
-
Erzberger J.P., Mott M.L., and Berger J.M. Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling. Nat. Struct. Mol. Biol. 13 (2006) 676-683
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 676-683
-
-
Erzberger, J.P.1
Mott, M.L.2
Berger, J.M.3
-
32
-
-
55649098814
-
Structural synergy and molecular crosstalk between bacterial helicase loaders and replication initiators
-
Mott M.L., Erzberger J.P., Coons M.M., and Berger J.M. Structural synergy and molecular crosstalk between bacterial helicase loaders and replication initiators. Cell 135 (2008) 623-634
-
(2008)
Cell
, vol.135
, pp. 623-634
-
-
Mott, M.L.1
Erzberger, J.P.2
Coons, M.M.3
Berger, J.M.4
-
33
-
-
1642325936
-
Evolutionary history and higher order classification of AAA+ ATPases
-
Iyer L.M., Leipe D.D., Koonin E.V., and Aravind L. Evolutionary history and higher order classification of AAA+ ATPases. J. Struct. Biol. 146 (2004) 11-31
-
(2004)
J. Struct. Biol.
, vol.146
, pp. 11-31
-
-
Iyer, L.M.1
Leipe, D.D.2
Koonin, E.V.3
Aravind, L.4
-
34
-
-
0031019643
-
Cryptic single-stranded-DNA binding activities of the phage lambda P and Escherichia coli DnaC replication initiation proteins facilitate the transfer of E. coli DnaB helicase onto DNA
-
Learn B.A., Um S.J., Huang L., and McMacken R. Cryptic single-stranded-DNA binding activities of the phage lambda P and Escherichia coli DnaC replication initiation proteins facilitate the transfer of E. coli DnaB helicase onto DNA. Proc. Natl Acad. Sci. USA 94 (1997) 1154-1159
-
(1997)
Proc. Natl Acad. Sci. USA
, vol.94
, pp. 1154-1159
-
-
Learn, B.A.1
Um, S.J.2
Huang, L.3
McMacken, R.4
-
35
-
-
2542535234
-
Quantitative analysis of nucleotide modulation of DNA binding by DnaC protein of Escherichia coli
-
Biswas S.B., Flowers S., and Biswas-Fiss E.E. Quantitative analysis of nucleotide modulation of DNA binding by DnaC protein of Escherichia coli. Biochem. J. 379 (2004) 553-562
-
(2004)
Biochem. J.
, vol.379
, pp. 553-562
-
-
Biswas, S.B.1
Flowers, S.2
Biswas-Fiss, E.E.3
-
36
-
-
33748568506
-
Complexed crystal structure of replication restart primosome protein PriB reveals a novel single-stranded DNA-binding mode
-
Huang C.Y., Hsu C.H., Sun Y.J., Wu H.N., and Hsiao C.D. Complexed crystal structure of replication restart primosome protein PriB reveals a novel single-stranded DNA-binding mode. Nucleic Acids Res. 34 (2006) 3878-3886
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 3878-3886
-
-
Huang, C.Y.1
Hsu, C.H.2
Sun, Y.J.3
Wu, H.N.4
Hsiao, C.D.5
-
37
-
-
0035824667
-
Characterization of single-stranded DNA-binding proteins from Mycobacteria. The carboxyl-terminal of domain of SSB is essential for stable association with its cognate RecA protein
-
Reddy M.S., Guhan N., and Muniyappa K. Characterization of single-stranded DNA-binding proteins from Mycobacteria. The carboxyl-terminal of domain of SSB is essential for stable association with its cognate RecA protein. J. Biol. Chem. 276 (2001) 45959-45968
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 45959-45968
-
-
Reddy, M.S.1
Guhan, N.2
Muniyappa, K.3
-
38
-
-
35348979683
-
Structure of hexameric DnaB helicase and its complex with a domain of DnaG primase
-
Bailey S., Eliason W.K., and Steitz T.A. Structure of hexameric DnaB helicase and its complex with a domain of DnaG primase. Science 318 (2007) 459-463
-
(2007)
Science
, vol.318
, pp. 459-463
-
-
Bailey, S.1
Eliason, W.K.2
Steitz, T.A.3
-
39
-
-
63349092249
-
The crystal structure of a replicative hexameric helicase DnaC and its complex with single-stranded DNA
-
Lo Y.H., Tsai K.L., Sun Y.J., Chen W.T., Huang C.Y., and Hsiao C.D. The crystal structure of a replicative hexameric helicase DnaC and its complex with single-stranded DNA. Nucleic Acids Res. 37 (2009) 804-814
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 804-814
-
-
Lo, Y.H.1
Tsai, K.L.2
Sun, Y.J.3
Chen, W.T.4
Huang, C.Y.5
Hsiao, C.D.6
-
40
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski Z., and Minor W. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 276 (1997) 307-326
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
41
-
-
0000560808
-
MOLREP: an automated program for molecular replacement
-
Vagin A., and Teplyakov A. MOLREP: an automated program for molecular replacement. J. Appl. Crystallogr. 30 (1997) 1022-1025
-
(1997)
J. Appl. Crystallogr.
, vol.30
, pp. 1022-1025
-
-
Vagin, A.1
Teplyakov, A.2
-
42
-
-
0032790081
-
XtalView/Xfit-a versatile program for manipulating atomic coordinates and electron density
-
McRee D.E. XtalView/Xfit-a versatile program for manipulating atomic coordinates and electron density. J. Struct. Biol. 125 (1999) 156-165
-
(1999)
J. Struct. Biol.
, vol.125
, pp. 156-165
-
-
McRee, D.E.1
-
43
-
-
3543012707
-
Crystallography & NMR system: a new software suite for macromolecular structure determination
-
Brunger A.T., Adams P.D., Clore G.M., DeLano W.L., Gros P., Grosse-Kunstleve R.W., et al. Crystallography & NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr., Sect. D: Biol. Crystallogr. 54 (1998) 905-921
-
(1998)
Acta Crystallogr., Sect. D: Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
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