Separate production of single-stranded dna is not necessary: Circuit denaturation of double-stranded dna followed by hybridization of single strands on oligonucleotide microchips

Journal of Biomolecular Structure and Dynamics

Volumn 27, Issue 3, 2009, Pages 347-359

  Vasiliskov, Vadim A ^a   Chudinov, Alexander V ^a   Chechetkin, Vladimir R ^a   Surzhikov, Sergey A ^a   Zasedatelev, Alexander S ^a   Mikhailovich, Vladimir M ^a  

^a ENGELHARDT INSTITUTE OF MOLECULAR BIOLOGY   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

DOUBLE STRANDED DNA; RIFAMPICIN; RNA POLYMERASE BETA SUBUNIT; SINGLE STRANDED DNA;

ARTICLE; CONTROLLED STUDY; DNA DENATURATION; DNA DNA HYBRIDIZATION; DNA MICROARRAY; MICROCHIP ANALYSIS; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; PRIORITY JOURNAL;

MYCOBACTERIUM TUBERCULOSIS;

EID: 70349901334     PISSN: 07391102     EISSN: 15380254     Source Type: Journal    
DOI: 10.1080/07391102.2009.10507321     Document Type: Article

References (31)

1. Chipping Forecast II. 2002. Nature Genetics, 32 Supplement
2. Stoughton, R. B., 2005. Annu Rev Biochem, 74:53–82.
3. Chechetkin, V. R., Prokopenko, D. V., Makarov, A. A., and Zasedatelev, A. S., 2006. Russian Nano-technologies, 1:13–31.
4. Pollack, J. R., 2007. Amer J Pathol, 171:375–385.
5. Kaltenboeck, B., and Kousoulas, K. G., 1996. Meth Mol Biol, 65:149–153.
6. Higuchi, R. G., and Ochman, H., 1989. Nucleic Acids Res, 17:5865
7. Hannon, K., Johnstone, E., Craft, L. S., Little, S. P., Smith, C. K., Heiman, M. L., and Santerre, R. F., 1993. Anal Biochem, 212:421–427.
8. Williams, K. P., and Bartel, D. P., 1995. Nucleic Acids Res, 23:4220–4221.
9. Pagratis, N. C., 1996. Nucleic Acids Res, 24:3645–31.
10. Green, A., Roopra, A., and Vaudin, M., 1990. Nucleic Acids Res, 18:6163–6164.
11. Shi, S. J., Scheffer, A., Bjeldanes, E., Reynolds, M. A., and Arnold, L. J., Jr. 2001. Nucleic Acids Res, 29:4251–4256.
12. Tao, S. C., Gao, H. F., Cao, F., Ma, X. M., and Cheng, J., 2003. Mol Cell Probes, 17:197–202.
13. Chandler, D. P., Newton, G. J., Small, J. A., and Daly, D. S., 2003. Applied and Environmental Microbiology, 69:2950–2958.
14. Chung, Y. C., Lin, Y. C., Chueh, C. D., Ye, C. Y., Lai, L. W., and Zhao, Q., 2008. Electrophoresis, 29:1859–65.
15. Lipshutz, R. J., Fodor, S. P., Gingeras, T. R., and Lockhart, D. J., 1999. Nat Genet, 21:20–24.
16. Tillib, S. V., and Mirzabekov, A. D., 2001. Curr Opin Biotechnol, 12:53–58.
17. Mikhailovich, V., Lapa, S., Gryadunov, D., Sobolev, A., Strizhkov, B., Chernyh, N., Skotnikova, O., Irtuganova, O., Moroz, A., and et al. 2001. J Clin Microbiol, 39:2531–2540.
18. Rubina, A. Y., Pan'kov, S. V., Dementieva, E. I., Pen'kov, D. N., Butygin, A. V., Vasiliskov, V. A., Chudinov, A. V., Mikheikin, A. L., Mikhailovich, V. M., and Mirzabekov, A. D., 2004. Anal Biochem, 325:92–106.
19. Fotin, A. V., Drobyshev, A. L., Proudnikov, D. Y., Perov, A. N., and Mirzabekov, A. D., 1998. Nucleic Acids Res, 26:1515–1521.
20. Sorokin, N. V., Yurasov, D. Y., Cherepanov, A. I., Kozhekbaeva, J. M., Chechetkin, V. R., Gra, O. A., Livshits, M. A., Nasedkina, T. V., and Zasedatelev, A. S., 2007. J Biomol Struct Dyn, 24:571–578.
21. Musser, J. M., 1995. Clin Microbiol Rev, 8:496–31.
22. Telenti, A., Imboden, P., Marchesi, F., Lowrie, D., Cole, S., Colston, M. J., Matter, L., Schopfer, K., and Bodmer, T., 1993. Lancet, 341:647–31.
23. Sorokin, N. V., Chechetkin, V. R., Livshits, M. A., Vasiliskov, V. A., Turygin, A. Y., and Mirzabekov, A. D., 2003. J Biomol Struct Dyn, 21:279–288.
24. Sekar, M. M. A., Bloch, W., and St John, P. M., 2005. Nucleic Acids Res, 33:366–375.
25. Reynaldo, L. P., Vologodskii, A. V., Neri, B. P., and Lyamichev, V. I., 2000. J Mol Biol, 297:511–520.
26. Frank-Kamenetskii, M. D., 2002. Encyclopedia of Life Sciences London:Macmillan, Nature Publishing Group.
27. Landau, L. D., and Lifschitz, E. M., 1987. Fluid Mechanics New York:Pergamon Press.
28. Kuznetsov, S. V., Shen, Y., Benight, A. S., and Ansari, A., 2001. Biophys J, 81:2864–31.
29. Wang, Y. T., Yang, W. J., Li, C. L., Doudeva, L. G., and Yuan, H. S., 2007. Nucleic Acids Res, 35:584–594.
30. Grokhovsky, S. L., 2005. Mol Biol, 40:276–283.
31. Chechetkin, V. R., Turygin, A. Y., Proudnikov, D. Y., Prokopenko, D. V., Kirillov, E. V., and Mirzabekov, A. D., 2001. J Biomol Struct Dyn, 18:813–823.