메뉴 건너뛰기




Volumn 40, Issue 2, 2006, Pages 276-283

Specificity of DNA cleavage by ultrasound

Author keywords

5 CpG; DNA cleavage; DNA conformation; Sequence specific ligands; Ultrasound

Indexed keywords


EID: 33646509865     PISSN: 00268933     EISSN: 16083245     Source Type: Journal    
DOI: 10.1134/S0026893306020142     Document Type: Article
Times cited : (25)

References (34)
  • 1
    • 0000516492 scopus 로고
    • The properties of sonic fragments of deoxyribosenucleic acid
    • Doty P., McGill B.B., Rice S.A. 1958. The properties of sonic fragments of deoxyribosenucleic acid. Proc. Natl. Acad. Sci. USA. 44, 432-438.
    • (1958) Proc. Natl. Acad. Sci. USA , vol.44 , pp. 432-438
    • Doty, P.1    McGill, B.B.2    Rice, S.A.3
  • 2
    • 73049162173 scopus 로고
    • Studies on the sonic degradation of deoxyribonucleic acid
    • Davison P.F., Freifelder D. 1962. Studies on the sonic degradation of deoxyribonucleic acid. Biophys. J. 2, 235-247.
    • (1962) Biophys. J. , vol.2 , pp. 235-247
    • Davison, P.F.1    Freifelder, D.2
  • 3
    • 0015365908 scopus 로고
    • Mechanism of inactivation of Haemophilus influenzae transforming deoxyribonucleic acid by sonic radiation
    • Randolph M.L., Setlow J.K. 1972. Mechanism of inactivation of Haemophilus influenzae transforming deoxyribonucleic acid by sonic radiation. J. Bacteriol. 111, 186-191.
    • (1972) J. Bacteriol. , vol.111 , pp. 186-191
    • Randolph, M.L.1    Setlow, J.K.2
  • 4
    • 7644240132 scopus 로고    scopus 로고
    • The application of ultrasound as a rapid method to provide DNA fragments suitable for detection by DNA biosensors
    • Mann T.L., Krull U.J. 2004. The application of ultrasound as a rapid method to provide DNA fragments suitable for detection by DNA biosensors. Biosens. Bioelectronics. 20, 945-955.
    • (2004) Biosens. Bioelectronics , vol.20 , pp. 945-955
    • Mann, T.L.1    Krull, U.J.2
  • 5
    • 0030039174 scopus 로고    scopus 로고
    • The role of cavitation in the induction of cellular DNA damage by ultrasound and lithotripter shock waves in vitro
    • Miller D.L., Thomas R.M. 1996. The role of cavitation in the induction of cellular DNA damage by ultrasound and lithotripter shock waves in vitro. Ultrasound Med. Biol. 22, 681-687.
    • (1996) Ultrasound Med. Biol. , vol.22 , pp. 681-687
    • Miller, D.L.1    Thomas, R.M.2
  • 8
    • 0011604063 scopus 로고    scopus 로고
    • Applications of ultrasound to materials chemistry
    • Suslick K.S., Price G.J. 1999. Applications of ultrasound to materials chemistry. Annu. Rev. Mater. Sci. 29, 295-326.
    • (1999) Annu. Rev. Mater. Sci. , vol.29 , pp. 295-326
    • Suslick, K.S.1    Price, G.J.2
  • 11
    • 0024083942 scopus 로고
    • A simple system for phage M13 cloning and DNA sequencing with the use of terminators
    • Kraev A.S. 1988. A simple system for phage M13 cloning and DNA sequencing with the use of terminators. Mol. Biol. 22, 1164-1197.
    • (1988) Mol. Biol. , vol.22 , pp. 1164-1197
    • Kraev, A.S.1
  • 12
    • 0019387686 scopus 로고
    • Structure of a B-DNA dodecamer: 2. Influence of base sequence on helix structure
    • Dickerson R.E., Drew H.R. 1981. Structure of a B-DNA dodecamer: 2. Influence of base sequence on helix structure. J. Mol. Biol. 149, 761-786.
    • (1981) J. Mol. Biol. , vol.149 , pp. 761-786
    • Dickerson, R.E.1    Drew, H.R.2
  • 13
    • 0024121469 scopus 로고
    • Calibration of DNA curvature and a unified description of sequence-directed bending
    • Hyeon-Sook K., Crothers D.M. 1988. Calibration of DNA curvature and a unified description of sequence-directed bending. Proc. Natl. Acad. Sci. USA. 85, 1763-1767.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 1763-1767
    • Hyeon-Sook, K.1    Crothers, D.M.2
  • 14
    • 0023732135 scopus 로고
    • Origin of DNA helical structure and its sequence dependance
    • Sarai A., Mazur J., Nussinov R., Jernigan R.L. 1988. Origin of DNA helical structure and its sequence dependance. Biochemistry. 27, 8498-8502.
    • (1988) Biochemistry , vol.27 , pp. 8498-8502
    • Sarai, A.1    Mazur, J.2    Nussinov, R.3    Jernigan, R.L.4
  • 15
    • 0026019603 scopus 로고
    • Molecular dynamics simulation of the hydration shell of a B-DNA decamer reveals two main types of minor-groove hydration depending on groove width
    • Chuprina V.P., Heinemann U., Nurislamov A.A., Zielenkiewicz P., Dickerson R.E., Saender W. 1991. Molecular dynamics simulation of the hydration shell of a B-DNA decamer reveals two main types of minor-groove hydration depending on groove width. Proc. Natl. Acad. Sci. USA. 88, 593-597.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 593-597
    • Chuprina, V.P.1    Heinemann, U.2    Nurislamov, A.A.3    Zielenkiewicz, P.4    Dickerson, R.E.5    Saender, W.6
  • 18
    • 0025973664 scopus 로고
    • Sequence-specific cleavage of double-stranded DNA caused by X-ray ionization of the platinum atom in the Pt-bis-netropsin-DNA complex
    • Grokhovsky S.L., Zubarev V.E. 1991. Sequence-specific cleavage of double-stranded DNA caused by X-ray ionization of the platinum atom in the Pt-bis-netropsin-DNA complex. Nucleic Acids Res. 19, 257-264.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 257-264
    • Grokhovsky, S.L.1    Zubarev, V.E.2
  • 19
    • 0026847097 scopus 로고
    • Ligands with affinity for certain DNA sequences: 9. Sythesis of netropsin and distamycin a analogs containing a sarcolysin residue or a platinum (II) atom
    • Grokhovsky S.L., Gottikh B.P., Zhuze A.L. 1992. Ligands with affinity for certain DNA sequences: 9. Sythesis of netropsin and distamycin A analogs containing a sarcolysin residue or a platinum (II) atom. Bioorg. Khim. 18, 570-583.
    • (1992) Bioorg. Khim. , vol.18 , pp. 570-583
    • Grokhovsky, S.L.1    Gottikh, B.P.2    Zhuze, A.L.3
  • 22
    • 0028910271 scopus 로고
    • Express protocol for generating G + A sequencing ladders
    • Belikov S., Wieslander L. 1995. Express protocol for generating G + A sequencing ladders. Nuclei Acids Res. 23, 310.
    • (1995) Nuclei Acids Res. , vol.23 , pp. 310
    • Belikov, S.1    Wieslander, L.2
  • 24
    • 0032426005 scopus 로고    scopus 로고
    • Comparative DNA analysis across diverse genomes
    • Karlin S., Campbell A.M., Mrazek J. 1998. Comparative DNA analysis across diverse genomes. Annu. Rev. Genet. 32, 185-225.
    • (1998) Annu. Rev. Genet. , vol.32 , pp. 185-225
    • Karlin, S.1    Campbell, A.M.2    Mrazek, J.3
  • 25
    • 0020691774 scopus 로고
    • DNA methylation and gene activity
    • Doerfler W. 1983. DNA methylation and gene activity. Annu. Rev. Biochem. 52, 93-124.
    • (1983) Annu. Rev. Biochem. , vol.52 , pp. 93-124
    • Doerfler, W.1
  • 26
    • 0025266610 scopus 로고
    • Alternative chromatin structure at CpG islands
    • Tazi J., Bird A. 1990. Alternative chromatin structure at CpG islands. Cell. 60, 909-920.
    • (1990) Cell , vol.60 , pp. 909-920
    • Tazi, J.1    Bird, A.2
  • 27
    • 0032539693 scopus 로고    scopus 로고
    • A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
    • SantaLucia J., Jr. 1998. A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics. Proc. Natl. Acad. Sci. USA. 95, 1460-1465.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 1460-1465
    • SantaLucia Jr., J.1
  • 28
    • 4043172850 scopus 로고    scopus 로고
    • A determining influence for CpG dinucleotides on nucleosome positioning in vitro
    • Davey C.S., Pennings S., Reilly C., Meehan R.R., Allan J. 2004. A determining influence for CpG dinucleotides on nucleosome positioning in vitro. Nucleic Acids Res. 32, 4322-4331.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 4322-4331
    • Davey, C.S.1    Pennings, S.2    Reilly, C.3    Meehan, R.R.4    Allan, J.5
  • 31
    • 2342518189 scopus 로고    scopus 로고
    • Spontaneous sharp bending of double-stranded DNA
    • Cloutier T.E., Widom J. 2004. Spontaneous sharp bending of double-stranded DNA. Mol. Cell. 14, 355-362.
    • (2004) Mol. Cell , vol.14 , pp. 355-362
    • Cloutier, T.E.1    Widom, J.2
  • 33
    • 22244446185 scopus 로고    scopus 로고
    • Advances in mechanisms of genetic instability related to hereditary neurological diseases
    • Wells R.D., Dere R.L., Hebert M., Napierala M., Son L.S. 2005. Advances in mechanisms of genetic instability related to hereditary neurological diseases. Nucleic Acids Res. 33, 3785-3798.
    • (2005) Nucleic Acids Res. , vol.33 , pp. 3785-3798
    • Wells, R.D.1    Dere, R.L.2    Hebert, M.3    Napierala, M.4    Son, L.S.5
  • 34
    • 0037803571 scopus 로고    scopus 로고
    • Z-DNA: The long road to biological function
    • Rich A., Zhang S. 2003. Z-DNA: The long road to biological function. Nat. Rev. Genet. 4, 566-572.
    • (2003) Nat. Rev. Genet. , vol.4 , pp. 566-572
    • Rich, A.1    Zhang, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.