Powdery mildew-infection changes bacterial community composition in the phyllosphere

Microbes and Environments

Volumn 24, Issue 3, 2009, Pages 217-223

  Suda, Wataru ^a   Nagasaki, Asami ^a   Shishido, Masahiro ^a  

^a CHIBA UNIVERSITY   (Japan)

Author keywords

Community level physiological profile (CLPP); Denaturing gradient gel electrophoresis (DGGE); Epiphytic bacteria; Phyllosphere; Powdery mildew

Indexed keywords

BACTERIA (MICROORGANISMS); CUCUMIS SATIVUS; ERYSIPHALES;

EID: 70349895207     PISSN: 13426311     EISSN: 13426311     Source Type: Journal    
DOI: 10.1264/jsme2.ME09114     Document Type: Article

References (40)

1. Ames, R.N., C.P.P. Reid, and E.R. Ingham. 1984. Rhizosphere bacterial population responses to root colonization by a vesicular- arbuscular my corrhizal fungus. New Phytol. 96:555-563.
2. Andrade, G., R.G. Linderman, and G.J. Bethlenfalvay. 1998. Bacterial associations with the mycorrhizosphere and hyphosphere of the arbuscular mycorrhizal fungus Glomus mosseae. Plant Soil 202:79-87.
3. Andrews, J.H., and R.F. Harris. 2000. The ecology and biogeography of microorganisms on plant surfaces. Annu. Rev. Phytopathol. 38:145-180.
4. Azaizeh, H.A., A. Marschner, V. Römheld, and L. Wittenmayer. 1995. Effects of a vesicular-arbuscular mycorrhizal fungus and other soil microorganisms on growth, mineral nutrient acquisition and root exudation of soilgrown maize plants. Mycorrhiza 5:321-327.
5. Belanger, R.R., W.R. Bushnell, A.J. Dik, and T.L.W. Carver. 2002. The Powdery Mildews: A Comprehensive Treatise. APS press, St. Paul, MN, USA.
6. Braun, U. 1987. A monograph of the Erysiphales (powdery mildews). Beiheft zur Nova Hedwigia 89:1-760.
7. Dickinson, C.H. 1986. Adaptation of microorganisms to climatic conditions affecting aerial plant surfaces, p. 77-100. In N.J. Fokkema, and J. van den Heuvel (ed.), Microbiology of the Phyllosphere. Cambridge University Press, Cambridge, UK.
8. Enya, J., H. Shinohara, S. Yoshida, T. Tsukiboshi, H. Negishi, K. Suyama, and S. Tsushima. 2007. Culturable leaf-associated bacteria on tomato plants and their potential as biological control agents. Microb. Ecol. 53: 524-536.
9. Ercolani, G.L. 1991. Distribution of epiphytic bacteria on olive leaves and the influence of leaf age and sampling time. Microb. Ecol. 21:35-48.
10. Fett, W.F., S.F. Osman, and M.F. Dunn. 1987. Auxin production by plant-pathogenic pseudomonads and xanthomonads. Appl. Environ. Microbiol. 53:1839-1845.
11. Fürnkranz, M., W. Wanek, A. Richter, G. Abell, F. Rasche, and A. Sessitsch. 2008. Nitrogen fixation by phyllosphere bacteria associated with higher plants and their colonizing epiphytes of a tropical lowland rainforest of Costa Rica. ISME J. 2:561-570.
12. Garland, J.L., and A.L. Mills. 1991. Classification and characterization of heterotrophic microbial communities on the basis of patterns of community-level sole-carbon-source utilization. Appl. Environ. Microbiol. 57:2351-2359.
13. Hirano, S.S., and C.D. Upper. 1989. Diel variation in population size and ice nucleation activity of Pseudomonas syringae on snap bean leaflets. Appl. Environ. Microbiol. 55:623-630.
14. Hirano, S.S., and C.D. Upper. 2000. Bacteria in the leaf ecosystem with emphasis on Pseudomonas syringae-a pathogen, ice nucleus, and epiphyte. Microbiol. Mol. Biol. Rev. 64:624-653.
15. Johansson, J.F., L.R. Paul, and R.D. Finlay. 2004. Microbial interactions in the mycorrhizosphere and their significance for sustainable agriculture. FEMS Microbiol. Ecol. 48:1-13.
16. Kadivar, H., and A.E. Stapleton. 2003. Ultraviolet radiation alters maize phyllosphere bacterial diversity. Microb. Ecol. 45:353-361.
17. Kinkel, L.L., M. Wilson, and S.E. Lindow. 2000. Plant species and plant incubation conditions influence variability in epiphytic bacterial population size. Microb. Ecol. 39:1-11.
18. Lane, D.J. 1991. 16S/23S rRNA sequencing, p. 115-175. In E. Stackebrandt, and M. Goodfellow (ed.), Nucleic Acid Techniques in Bacterial Systematic. John Wiley and Sons, West Sussex, UK.
19. Legard, D.E., M.P. McQuilken, J.M. Whipps, J.S. Fenlon, T.R. Fermor, I.P. Thompson, M.J. Bailey, and J.M. Lynch. 1994. Studies of seasonal changes in the microbial populations on the phyllosphere of spring wheat as a prelude to the release of a genetically modified microorganism. Agric. Ecosyst. Environ. 50:87-101.
20. Lindow, S.E., and M.T. Brandl. 2003. Microbiology of the phyllo-sphere. Appl. Environ. Microbiol. 69:1875-1883.
21. Lipka, U., R. Fuchs, and V. Lipka. 2008. Arabidopsis non-host resistance to powdery mildews. Curr. Opin. Plant Biol. 11:404-411.
22. Liu, B., M.L. Gumpertz, S. Hu, and J.B. Ristaino. 2007. Long-term effects of organic and synthetic soil fertility amendments on soil microbial communities and the development of southern blight. Soil. Biol. Biochem. 39:2302-2316.
23. Ludwig, J.A., and J.F. Reynolds. 1988. Statistical Ecology: A Primer on Methods and Computing. John Wiley and Sons, New York, NY,USA.
24. Milling, A., N.C. Gomes, O. Sichler, M. Götz, and K. Smalla. 2005.Nucleic acid extraction from environmental samples, p. 11-16. In A.J. Osborn, and C.J. Smith (ed.), Molecular Microbial Ecology. Taylor and Francis, USA.
25. Morris, C.E., and L.L. Kinkel. 2002. Fifty years of phyllosphere microbiology: Significant contributions to research in related fields,p. 365-375. In S.E. Lindow, I. Hecht-Poinar, and V. Elliott (ed.), Phyllosphere Microbiology. APS Press, St. Paul, MN, USA.
26. Muyzer, G., E.C. de Waal, and A.G. Uitterlinden. 1993. Profiling of complex microbial populations by denaturing gradient gel electro- phoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59:695-700.
27. O'Brien, R.D., and S.E. Lindow. 1989. Effect of plant species and environmental conditions on epiphytic population sizes of Pseudomonas syringae and other bacteria. Phytopathology 79:619-627.
28. Schreiner, R.P., K.L. Mihara, H. McDaniel, and G.J. Bethlenfalvay. 1997. Mycorrhizal fungi influence plant and soil functions and interactions. Plant. Soil. 188:199-209.
29. Schulze-Lefert, P., and J. Vogel. 2000. Closing the ranks to attack by powdery mildew. Trends Plant Sci. 5:343-348.
30. Secilia, J., and D.J., Bagyaraj. 1987. Bacteria and actinomycetes associated with pot cultures of vesicular arbuscular mycorrhizas. Can. J. Microbiol. 33:1069-1073.
31. Suda, W., M. Oto, S. Amachi, H. Shinoyama, and M. Shishido. 2008. A direct method to isolate DNA from phyllosphere microbial communities without disrupting leaf tissues. Microbes. Environ. 23:248-252.
32. Sundin, G.W., and J.L. Jacobs. 1999. Ultraviolet radiation (UVR) sensitivity analysis and UVR survival strategies of a bacterial community from the phyllosphere of field-grown peanut (Arachis hypogeae L.). Microb. Ecol. 38:27-38.
33. Thompson, I.P., M.J. Bailey, J.S. Fenlon, T.R. Fermor, A.K. Lilley, J.M. Lynch, P.J. McCormack, M.P. McQuilken, and K.J. Purdy. 1993. Quantitative and qualitative seasonal changes in the microbial community from the phyllosphere of sugar beet (Beta vulgaris). Plant Soil 150:177-191.
34. Weber, K.P., J.A. Grove, M. Gehder, W.A. Anderson, and R.L. Legge. 2007. Data transformations in the analysis of community-level substrate utilisation data from microplates. J. Microbiol. Methods. 69:461-469.
35. Weyman-Kaczmarkowa, W., and Z. Pedziwilk. 2001. Epiphytic microflora of poplar clones susceptible and resistant to infection by Dothichiza populea. Microbiol. Res. 156:83-86.
36. Widmer, F., A. Fließbetabach, E. Laczkó, J. Schulze-Aurich, and J. Zeyer. 2001. Assessing soil biological characteristics: A comparison of bulk soil community DNA-, PLFA-, and Biolog-analyses. Soil Biol. Biochem. 33:1029-1036.
37. Yang, C.H., D.E. Crowley, J. Borneman, and N.T. Keen. 2001.Microbial phyllosphere populations are more complex than previously realized. Proc. Natl. Acad. Sci. USA 98:3889-3894.
38. Yang, C.H., D.E. Crowley, and J.A. Menge. 2001. 16S rDNA fingerprinting of rhisosphere bacterial communities associated with healthy and Phytophthora infected avocado roots. FEMS Microbiol. Ecol. 35:129-136.
39. Yarwood, C.E. 1978. History and taxonomy of powdery mildews, p. 1-37. In D.M. Spencer (ed.), The Powdery Mildews. Academic Press, London, UK.
40. Zak, J.C., M.R. Willig, D.L. Moorhead, and H.G. Wildman. 1994. Functional diversity of microbial communities: A quantitative approach. Soil. Biol. Biochem. 26:1101-1108.