메뉴 건너뛰기




Volumn 3, Issue 5, 2009, Pages 368-378

Evolution of gene auto-regulation in the presence of noise

Author keywords

[No Author keywords available]

Indexed keywords

ANALYTICAL CONDITIONS; AUTOREGULATIONS; AVERAGE NUMBERS; CRITICAL FACTORS; CRITICAL THRESHOLD; DEGRADATION RATE; FITNESS FUNCTIONS; GENE NETWORKS; NEGATIVE FEEDBACK; NEGATIVE FEEDBACK LOOP; NEGATIVE FEEDBACK MECHANISM; PROTEIN DYNAMICS; PROTEIN MOLECULES; SOURCE OF NOISE; STOCHASTIC FLUCTUATION;

EID: 70349538868     PISSN: 17518849     EISSN: None     Source Type: Journal    
DOI: 10.1049/iet-syb.2009.0002     Document Type: Conference Paper
Times cited : (26)

References (34)
  • 2
    • 0242416539 scopus 로고    scopus 로고
    • 'Noise in eukaryotic gene expression'
    • 0028-0836
    • Blake, W.J., Kaern, M., Cantor, C.R., and Collins, J.J.: 'Noise in eukaryotic gene expression', Nature, 2003, 422, p. 633-637 0028-0836
    • (2003) Nature , vol.422 , pp. 633-637
    • Blake, W.J.1    Kaern, M.2    Cantor, C.R.3    Collins, J.J.4
  • 3
    • 0037119587 scopus 로고    scopus 로고
    • 'Stochastic gene expression in a single cell'
    • 0036-8075
    • Elowitz, M.B., Levine, A.J., Siggia, E.D., and Swain, P.S.: 'Stochastic gene expression in a single cell', Science, 2002, 297, p. 1183-1186 0036-8075
    • (2002) Science , vol.297 , pp. 1183-1186
    • Elowitz, M.B.1    Levine, A.J.2    Siggia, E.D.3    Swain, P.S.4
  • 4
    • 25444468618 scopus 로고    scopus 로고
    • 'Noise in gene expression: Origins, consequences, and control'
    • 0036-8075
    • Raser, J.M., and O'shOa, E.K.: 'Noise in gene expression: origins, consequences, and control', Science, 2005, 309, p. 2010-2013 0036-8075
    • (2005) Science , vol.309 , pp. 2010-2013
    • Raser, J.M.1    O'shea, E.K.2
  • 5
    • 0017185026 scopus 로고
    • 'Non-genetic individuality: Chance in the single cell'
    • 0028-0836
    • Spudich, J.L., and KosCland, D.E.: 'Non-genetic individuality: chance in the single cell', Nature, 1976, 262, p. 467-471 0028-0836
    • (1976) Nature , vol.262 , pp. 467-471
    • Spudich, J.L.1    Koshland, D.E.2
  • 6
    • 42949131308 scopus 로고    scopus 로고
    • 'Selection to minimise noise in living systems and its implications for the evolution of gene expression'
    • Lehner, B.: 'Selection to minimise noise in living systems and its implications for the evolution of gene expression', Mol. Syst. Biol., 2008, 4, (170)
    • (2008) Mol. Syst. Biol. , vol.4 , Issue.170
    • Lehner, B.1
  • 8
    • 34249079154 scopus 로고    scopus 로고
    • 'Network motifs: Theory and experimental approaches'
    • Alon, U.: 'Tetwork motifs: theory and experimental approaches', Nat. Rev. Genet., 2007, 8, p. 450-461
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 450-461
    • Alon, U.1
  • 9
    • 0041825399 scopus 로고    scopus 로고
    • 'Design principles for regulator gene expression in a repressible gene circuit'
    • Wall, M.E., Hlavacek, W.S., and Savageau, M.A.: 'Design principles for regulator gene expression in a repressible gene circuit', J. Mol. Biol., 2003, 332, p. 861-876
    • (2003) J. Mol. Biol. , vol.332 , pp. 861-876
    • Wall, M.E.1    Hlavacek, W.S.2    Savageau, M.A.3
  • 10
    • 0016145568 scopus 로고
    • 'Comparison of classical and autogenous systems of regulation in inducible operons'
    • 0028-0836
    • Savageau, M.A.: 'Comparison of classical and autogenous systems of regulation in inducible operons', Nature, 1974, 252, p. 546-549 0028-0836
    • (1974) Nature , vol.252 , pp. 546-549
    • Savageau, M.A.1
  • 11
    • 4143110506 scopus 로고    scopus 로고
    • 'Control of internal and external noise in genetic regulatory networks'
    • Orrell, D., and Bolouri, H.: 'Control of internal and external noise in genetic regulatory networks', J. Theor. Biol., 2004, 230, p. 301-312
    • (2004) J. Theor. Biol. , vol.230 , pp. 301-312
    • Orrell, D.1    Bolouri, H.2
  • 12
    • 34447509590 scopus 로고    scopus 로고
    • 'Effect of feedback regulation on stochastic gene expression'
    • Tao, Y., Zheng, X., and Sun, Y.: 'Effect of feedback regulation on stochastic gene expression', J. Theor. Biol., 2007, 247, p. 827-836
    • (2007) J. Theor. Biol. , vol.247 , pp. 827-836
    • Tao, Y.1    Zheng, X.2    Sun, Y.3
  • 13
    • 0034212551 scopus 로고    scopus 로고
    • 'Engineering stability in gene networks by autoregulation'
    • 0028-0836
    • Becskei, A., and Serrano, L.: 'Engineering stability in gene networks by autoregulation', Nature, 2000, 405, p. 590-593 0028-0836
    • (2000) Nature , vol.405 , pp. 590-593
    • Becskei, A.1    Serrano, L.2
  • 14
    • 3042715501 scopus 로고    scopus 로고
    • 'Multivariate analysis of noise in genetic regulatory networks'
    • Tomioka, R., Kimura, H., Kobayashi, T.J., and Aihara, K.: 'Multivariate analysis of noise in genetic regulatory networks', J. Theor. Biol., 2004, 229, p. 501-521
    • (2004) J. Theor. Biol. , vol.229 , pp. 501-521
    • Tomioka, R.1    Kimura, H.2    Kobayashi, T.J.3    Aihara, K.4
  • 15
    • 0037447260 scopus 로고    scopus 로고
    • 'Frequency domain analysis of noise in autoregulated gene circuits'
    • Simpson, M.L., Cox, C.D., and Sayler, G.S.: 'Frequency domain analysis of noise in autoregulated gene circuits', PNAS, 2003, 100, p. 4551-4556
    • (2003) PNAS , vol.100 , pp. 4551-4556
    • Simpson, M.L.1    Cox, C.D.2    Sayler, G.S.3
  • 17
    • 68049139445 scopus 로고    scopus 로고
    • 'Optimal feedback strength for noise suppression in autoregulatory gene networks'
    • 0006-3495
    • Singh, A., and Hespanha, J.: 'Optimal feedback strength for noise suppression in autoregulatory gene networks', Biophys. J., 2009, 96, (10), p. 4013-4023 0006-3495
    • (2009) Biophys. J. , vol.96 , Issue.10 , pp. 4013-4023
    • Singh, A.1    Hespanha, J.2
  • 18
    • 8544264562 scopus 로고    scopus 로고
    • 'Efficient attenuation of stochasticity in gene expression through post-transcriptional control'
    • Swain, P.S.: 'Efficient attenuation of stochasticity in gene expression through post-transcriptional control', J. Mol. Biol., 2004, 344, p. 956-976
    • (2004) J. Mol. Biol. , vol.344 , pp. 956-976
    • Swain, P.S.1
  • 19
    • 42149184620 scopus 로고    scopus 로고
    • 'Ultrasensitive gene regulation by positive feedback loops in nucleosome modification'
    • Sneppen, K., Micheelsen, M.A., and Dodd, I.B.: 'Ultrasensitive gene regulation by positive feedback loops in nucleosome modification', Mol. Syst. Biol., 2008, 4, (182)
    • (2008) Mol. Syst. Biol. , vol.4 , Issue.182
    • Sneppen, K.1    Micheelsen, M.A.2    Dodd, I.B.3
  • 21
    • 18744361871 scopus 로고    scopus 로고
    • 'Enhancement of cellular memory by reducing stochastic transitions'
    • 0028-0836
    • Acar, M., Becskei, A., and van Oudenaarden, A.: 'Enhancement of cellular memory by reducing stochastic transitions', Nature, 2005, 435, p. 228-232 0028-0836
    • (2005) Nature , vol.435 , pp. 228-232
    • Acar, M.1    Becskei, A.2    van Oudenaarden, A.3
  • 22
    • 0842285841 scopus 로고    scopus 로고
    • 'Summing up the noise in gene networks'
    • 0028-0836
    • Paulsson, J.: 'Summing up the noise in gene networks', Nature, 2004, 427, p. 415-418 0028-0836
    • (2004) Nature , vol.427 , pp. 415-418
    • Paulsson, J.1
  • 23
    • 0036790975 scopus 로고    scopus 로고
    • 'Intrinsic and extrinsic contributions to stochasticity in gene expression'
    • Swain, P.S., Elowitz, M.B., and Siggia, E.D.: 'Intrinsic and extrinsic contributions to stochasticity in gene expression', PNAS, 2002, 99, p. 12795-12800
    • (2002) PNAS , vol.99 , pp. 12795-12800
    • Swain, P.S.1    Elowitz, M.B.2    Siggia, E.D.3
  • 24
    • 20344389483 scopus 로고    scopus 로고
    • 'Model of stochastic gene expression'
    • Paulsson, J.: 'Model of stochastic gene expression', Phy. Life Rev., 2005, 2, p. 157-175
    • (2005) Phy. Life Rev. , vol.2 , pp. 157-175
    • Paulsson, J.1
  • 25
    • 56249130793 scopus 로고    scopus 로고
    • 'Analytical distributions for stochastic gene expression'
    • Shahrezaei, V., and Swain, P.S.: 'Analytical distributions for stochastic gene expression', PNAS, 2008, 105, p. 17256-17261
    • (2008) PNAS , vol.105 , pp. 17256-17261
    • Shahrezaei, V.1    Swain, P.S.2
  • 26
    • 43249118966 scopus 로고    scopus 로고
    • 'Colored extrinsic fluctuations and stochastic gene expression'
    • Shahrezaei, V., Ollivier, J.F., and Swain, P.S.: 'Colored extrinsic fluctuations and stochastic gene expression', Mol. Syst. Biol., 2008, 4, (196)
    • (2008) Mol. Syst. Biol. , vol.4 , Issue.196
    • Shahrezaei, V.1    Ollivier, J.F.2    Swain, P.S.3
  • 27
    • 33745725673 scopus 로고    scopus 로고
    • 'The effect of negative feedback on noise propagation in transcriptional gene networks'
    • 026108
    • Hooshangi, S., and Weiss, R.: 'The effect of negative feedback on noise propagation in transcriptional gene networks', CHAOS, 2006, 16, 026108 1054-1500
    • (2006) CHAOS , vol.16 , pp. 1054-1500
    • Hooshangi, S.1    Weiss, R.2
  • 28
    • 52949098296 scopus 로고    scopus 로고
    • 'Frequency-modulated nuclear localization bursts coordinate gene regulation'
    • 0028-0836
    • Cai, L., Dalal, C.K., and Elowitz, M.B.: 'Frequency-modulated nuclear localization bursts coordinate gene regulation', Nature, 2008, 455, p. 485-490 0028-0836
    • (2008) Nature , vol.455 , pp. 485-490
    • Cai, L.1    Dalal, C.K.2    Elowitz, M.B.3
  • 29
    • 0032077377 scopus 로고    scopus 로고
    • 'From specific gene regulation to genomic networks: A global analysis of transcriptional regulation in Escherichia coli'
    • Thieffry, D., Huerta, A.M., Prez-Rueda, E., and Collado-Vides, J.: 'From specific gene regulation to genomic networks: A global analysis of transcriptional regulation in Escherichia coli', Bioessays, 1998, 20, p. 433-440
    • (1998) Bioessays , vol.20 , pp. 433-440
    • Thieffry, D.1    Huerta, A.M.2    Prez-Rueda, E.3    Collado-Vides, J.4
  • 30
    • 0036428761 scopus 로고    scopus 로고
    • 'Negative autoregulation speeds the response times of transcription networks'
    • Rosenfeld, N., Elowitz, M.B., and Alon, U.: 'Negative autoregulation speeds the response times of transcription networks', J. Mol. Biol., 2002, 323, p. 785-793
    • (2002) J. Mol. Biol. , vol.323 , pp. 785-793
    • Rosenfeld, N.1    Elowitz, M.B.2    Alon, U.3
  • 31
    • 0017137088 scopus 로고
    • 'Translational, autogenous regulation of gene 32 expression during bacteriophage t4 infection'
    • Russel, M., Gold, L., Morrissett, H., and O'Farrell, P.Z.: 'Translational, autogenous regulation of gene 32 expression during bacteriophage t4 infection', J. Biol. Chem., 1976, 251, p. 7263-7270
    • (1976) J. Biol. Chem. , vol.251 , pp. 7263-7270
    • Russel, M.1    Gold, L.2    Morrissett, H.3    O'Farrell, P.Z.4
  • 32
    • 0035919778 scopus 로고    scopus 로고
    • 'The relationship between translational control and mrna degradation for the Escherichia coli threonyl-trna synthetase gene'
    • Nogueira, T., de Smit, M., Graffe, M., and Springer, M.: 'The relationship between translational control and mrna degradation for the Escherichia coli threonyl-trna synthetase gene', J. Mol. Biol., 2001, 310, p. 709-722
    • (2001) J. Mol. Biol. , vol.310 , pp. 709-722
    • Nogueira, T.1    de Smit, M.2    Graffe, M.3    Springer, M.4
  • 34
    • 35048902729 scopus 로고    scopus 로고
    • 'Stochastic hybrid systems: Applications to communication networks'
    • Alur, R., Pappas, G.J. (Springer-Verlag, Berlin) (LNCS 2993)
    • Hespanha, J.P.: 'StochAstic hybrid systems: applications to communication networks', Alur, R., Pappas, G.J., Hybrid systems: computation and control, (Springer-Verlag, Berlin 2004), p. 387-401 (LNCS, 2993)
    • (2004) Hybrid Systems: Computation and Control , pp. 387-401
    • Hespanha, J.P.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.