Phylogenetic relationships and diversity of guignardia spp isolated from different hosts on ITS1-5,8S-ITS2 region;Relações filogenéticas e diversidade de isolados de guignardia spp oriundos de diferentes hospedeiros nas regiões ITS1-5,8S-ITS2

Revista Brasileira de Fruticultura

Volumn 31, Issue 2, 2009, Pages 360-380

  Wickert, Ester ^a   de Goes, Antonio ^b   de Macedo Lemos, Gertrudes ^b   de Souza, Andressa ^c   da Silveira, Érico Leandro ^c   Pereira, Fernanda Dias ^c   Rinaldo, Davi ^c  

^a Melhoramento de Plantas   (Brazil)

^b Produtividade em Pesquisa CNPq   (Brazil)

^c SÃO PAULO STATE UNIVERSITY UNESP   (Brazil)

Author keywords

Endophytic fungi; Genetic variability; Pathogenic

Indexed keywords

CITRUS; EUCALYPTUS; EUGENIA UNIFLORA; FUNGI; GUIGNARDIA; GUIGNARDIA CITRICARPA; GUIGNARDIA MANGIFERAE; PSIDIUM; VITACEAE;

EID: 70349448577     PISSN: 01002945     EISSN: None     Source Type: Journal    
DOI: 10.1590/s0100-29452009000200010     Document Type: Article

References (28)

1. ALTSCHUL, S. F.; MADDEN, T. L.; SCHAFFER, A. A.; ZHANG, J.; ZHANG, Z.; MILLER, W.; LIPMAN, D. J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research, Oxford, v. 25, p. 3389-3402, 1997.
2. BAAYEN, R. P.; BONANTS, P. J. M.; VERKLEY, G.; CARROLL, G. C.; VAN DER AA, H. A.; DE WEERDT, M.; VAN BROUWERSHAVEN, I. R.; SCHUTTE, G. C.; MACCHERONI, W. JR.; GLIENKE DE BLANCO, C.; AZEVEDO, J. L. Nonpathogenic isolates of the citrus black spot fungus, Guignardia citricarpa, identified as a cosmopolitan endophyte of woody plants, G. mangiferae (Phyllosticta capitalensis). Phytopathology, St. Paul, v. 92, p. 464-477, 2002.
3. BACIARELLEI-FALINI, L.; RUBINI, A.; RICCIONI, C.; PAOLOCCI, F. Morphological and molecular analysis of ectomycorrhizal diversity in a man-made T. melanosporum plantation: description of a novel truffle-like morphotypes. Mycorrhiza, Heidelberg, v. 16, p. 474-484, 2006.
4. BALDASSARI, R. B.; WICKERT, E.; GOES, A. Pathogenicity, colony morphology and diversity of isolates of Guignardia citricarpa and G. mangiferae isolated from Citrus spp. European Journal of Plant Pathology, Netherlands, v. 120, p. 103-110, 2008.
5. BRIDGE, P. D.; SPOONER, B. M.; ROBERTS, P. J. The impact of molecular data in fungal systematic. Advances in Botanical Research, Birmingham, v. 42, p. 33-67, 2005.
6. CROUWS, P. W. The impact of molecular phylogenetics on the taxonomy and diagnostics of fungi. EPPO Bulletin, Germany, v. 35, p. 47-51, 2005.
7. CROUWS, P. W.; GAMS, W.; STALPERS, J. A.; ROBERT, V.; STEGEHUIS, G. Mycobank: na online initiative to launch mycology into the 21st century. Studies in Mycology, Netherlands, v.50, p.19-22, 2004.
8. DRESLER-NURMI, A.; KAIJALAINEM, S.; LINDSTROM, K.; HATAKKA, A. Grouping of lignin degrading corticiod fungi based on RFLP analysis od 18S rDNA and ITS regions. Mycological Research, Cambridge, v. 103, p. 990-996, 1999.
9. GARGAS, A.; DEPRIEST, P. T. 1996. A nomenclature for fungus PCR primers with examples from intron- containing Ssu rDNA. Mycologia, Stanford, v. 88, p. 45-748, 1996.
10. GORDON, D.; ABAJIAN, C.; GREEN, P. Consed: a graphical tool for sequence finishing. Genome Research, Stanford, v. 8, p. 195-202, 1998.
11. KIMURA, M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, New York, v.16, p. 111-120, 1980.
12. KOGEL, K. H.; FRANKEN, P.; HÜCKELHOVEN, R. Endophyte or parasite - what decides? Current Opinion in Plant Biology, Berlim, v.9, p. 358-363, 2006.
13. KUMAR, S.; TAMURA, K.; NEI, M. MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Briefings in Bioinformatics, Oxford, v. 5, p. 150-163, 2004.
14. KURAMAE-IZIOKA, E. E. A rapid, easy and high yield protocol for total genomic DNA isolation of Colletotrichum gloesporioides and Fusarium oxysporum Revista Unimar, Marília, v.19, p. 683- 689, 1997.
15. MCMILLAN Jr.; R. T. Guignardia citricarpa a cause of black spot on mango foliage in Florida. Journal of Phytopathology, Berlim, v. 117, p. 260-264, 1986.
16. NEI, M.; KUMAR, S. Molecular evolution and phylogenetics. Oxford: Oxford University Press, 2000. 333 p.
17. NEI, M. Genetic distance between populations. American Naturalist, Chicago, v. 106, p. 283- 292, 1972.
18. OKANE, I.; LUMYONG, S.; NAKAGIRI, A.; ITO, T. Extensive host range of an endophytic fungus Guignardia endophyllicola (anamorph: Phyllosticta capitalensis). Mycoscience, Japan, v. 44, p. 353-363, 2003.
19. OKANE, I.; NAKAGIRI, A.; ITO, T.Identity of Guignardia sp. inhabiting ericaceous plants. Canadian Journal of Botany, Ontario, v. 79, p. 101-109, 2001.
20. RISTAINO, J.B.; MADRITCH, M.; TROUT, C. L.; PARRA, G. PCR amplification of ribosomal DNA for species identification in genus Phytophtora. Applied and Environmental Microbiology, Yale, v. 63, p. 948- 954, 1998.
21. ROBBERTSE, B.; REEVES, J. B.; SCHOCH, C. L.; SPATAFORA, J. W. A phylogenomic analysis of the Ascomycota. Fungal Genetics and Biology, New York, v. 43, n.10, p. 715-725, 2006.
22. RODRIGUES, K. F.; SIEBER, T. N.; GRÜNIG, C.; HOLDENRIDER, O. Characterization of Guignardia mangiferae isolated from tropical plants based in morphology, ISSR-PCR amplifications and ITS1-5.8S- ITS2 sequences. Mycological Research, Cambridge, v. 108, p. 45-52, 2004.
23. SAITOU, N.; NEI, M. The neighbor-joining metod: a new method for constructing phylogenetic trees. Molecular Biology and Evolution, Oxford, v. 4, p. 406-425, 1987.
24. SCHULTZ, B.; BOYLE, C. The endophytic continuum. Mycological Research, Londres, v. 109, n. 6, p. 661-686, 2005.
25. SUTTON, B.C.; WATERSTON, J.M. Guignardia citricarpa. Kew: Commonwealth Mycological Institute, 1985. (Descriptions of Pathogenic fungi and bacteria, 85)
26. TOZELLO, L. J.; RIBEIRO, W. R. C. Tratamento pós- colheita de goiaba (Psidium guajava L.) contra podridão de Guignardia psidii. Revista Brasileira de Fruticultura, Jaboticabal, v. 20, n. 2, p. 229-234, 1998.
27. WHITE, T. J.; BRUNS, T.; LEE, S.; TAYLOR, J. W. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR Protocols: A guide to methods and applications. San Diego: Academic Press, 1990. p. 315-322.
28. XU, J. Fundamentals of Fungal Molecular Population Genetic Analysis. Current Issues in Molecular Biology, Norwish, v. 8, p. 75-90, 2006.