메뉴 건너뛰기




Volumn 59, Issue 8, 2009, Pages 1947-1952

Dokdonella ginsengisoli sp. nov., isolated from soil from a ginseng field, and emended description of the genus Dokdonella

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA; RNA 16S; BACTERIAL DNA; FATTY ACID; QUINONE DERIVATIVE; RIBOSOME DNA;

EID: 70349330956     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.004945-0     Document Type: Article
Times cited : (18)

References (30)
  • 3
    • 19544372125 scopus 로고    scopus 로고
    • Lysobacter concretionis sp. nov., isolated from anaerobic granules in an upflow anaerobic sludge blanket reactor
    • Bae, H.-S., Im, W.-T. & Lee, S.-T. (2005). Lysobacter concretionis sp. nov., isolated from anaerobic granules in an upflow anaerobic sludge blanket reactor. Int J Syst Evol Microbiol 55, 1155-1161.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 1155-1161
    • Bae, H.-S.1    Im, W.-T.2    Lee, S.-T.3
  • 4
    • 0020407158 scopus 로고
    • Nonstaining (KOH) method for determination of Gramreactions of marine bacteria
    • Buck, J. D. (1982). Nonstaining (KOH) method for determination of Gramreactions of marine bacteria. Appl Environ Microbiol 44, 992-993.
    • (1982) Appl Environ Microbiol , vol.44 , pp. 992-993
    • Buck, J.D.1
  • 5
    • 33645229098 scopus 로고    scopus 로고
    • Dokdonella fugitiva sp. nov., a Gammaproteobacterium isolated from potting soil
    • Cunha, S., Tiago, I., Pires, A. L., da Costa, M. S. & Veríssimo, A. (2006). Dokdonella fugitiva sp. nov., a Gammaproteobacterium isolated from potting soil. Syst Appl Microbiol 29, 191-196.
    • (2006) Syst Appl Microbiol , vol.29 , pp. 191-196
    • Cunha, S.1    Tiago, I.2    Pires, A.L.3    da Costa, M.S.4    Veríssimo, A.5
  • 6
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 7
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 8
    • 0033973913 scopus 로고    scopus 로고
    • 2O-producing Xanthomonas-like isolates from biofilters as Stenotrophomonas nitritireducens sp. nov., Luteimonas mephitis gen. nov., sp. nov. and Pseudoxanthomonas broegbernensis gen. nov., sp. nov. Int J Syst Evol Microbiol 50, 273-282.
    • 2O-producing Xanthomonas-like isolates from biofilters as Stenotrophomonas nitritireducens sp. nov., Luteimonas mephitis gen. nov., sp. nov. and Pseudoxanthomonas broegbernensis gen. nov., sp. nov. Int J Syst Evol Microbiol 50, 273-282.
  • 9
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 10
    • 70350729952 scopus 로고    scopus 로고
    • Hall, T. A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41, 95-98.
    • Hall, T. A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41, 95-98.
  • 11
    • 0030435636 scopus 로고    scopus 로고
    • Comparative lipoquinone analysis of influent sewage and activated sludge by high-performance liquid chromatography and photodiode array detection
    • Hiraishi, A., Ueda, Y., Ishihara, J. & Mori, T. (1996). Comparative lipoquinone analysis of influent sewage and activated sludge by high-performance liquid chromatography and photodiode array detection. J Gen Appl Microbiol 42, 457-469.
    • (1996) J Gen Appl Microbiol , vol.42 , pp. 457-469
    • Hiraishi, A.1    Ueda, Y.2    Ishihara, J.3    Mori, T.4
  • 12
    • 6944248842 scopus 로고    scopus 로고
    • Rhodanobacter fulvus sp. nov., a ß-galactosidase-producing gammaproteobacterium
    • Im, W.-T., Lee, S.-T. & Yokota, A. (2004). Rhodanobacter fulvus sp. nov., a ß-galactosidase-producing gammaproteobacterium. J Gen Appl Microbiol 50, 143-147.
    • (2004) J Gen Appl Microbiol , vol.50 , pp. 143-147
    • Im, W.-T.1    Lee, S.-T.2    Yokota, A.3
  • 13
    • 70350744212 scopus 로고    scopus 로고
    • Im, W.-T., Jung, H.-M., Cui, Y.-S., Liu, Q.-M., Zhang, S.-L. & Lee, S.-T. (2005). Cultivation of the three hundreds of bacterial species from the Proceedings of the International Meeting of the Federation of Korean Microbiological Societies, abstract A035, p. 169. Seoul: Federation of Korean Microbiological Societies.
    • Im, W.-T., Jung, H.-M., Cui, Y.-S., Liu, Q.-M., Zhang, S.-L. & Lee, S.-T. (2005). Cultivation of the three hundreds of bacterial species from the Proceedings of the International Meeting of the Federation of Korean Microbiological Societies, abstract A035, p. 169. Seoul: Federation of Korean Microbiological Societies.
  • 15
    • 77956800518 scopus 로고
    • Lipid and cell-wall analysis in bacterial systematics
    • Komagata, K. & Suzuki, K. (1987). Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161-207.
    • (1987) Methods Microbiol , vol.19 , pp. 161-207
    • Komagata, K.1    Suzuki, K.2
  • 16
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 17
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 19
    • 0003174184 scopus 로고
    • Preparation and analysis of DNA
    • Edited by F. M. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith & K. Struhl. New York: Wiley
    • Moore, D. D. & Dowhan, D. (1995). Preparation and analysis of DNA. In Current Protocols in Molecular Biology, pp. 2-11. Edited by F. M. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith & K. Struhl. New York: Wiley.
    • (1995) Current Protocols in Molecular Biology , pp. 2-11
    • Moore, D.D.1    Dowhan, D.2
  • 20
    • 0023375195 scopus 로고
    • The neighbour-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbour-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 21
    • 70350739780 scopus 로고    scopus 로고
    • Sasser, M. (1990). Identification of bacteria through fatty acid analysis. In Methods in Phytobacteriology, chapter I.11, pp. 199-204. Edited by Z. Klement, K. Rudolph & D. C. Sands. Budapest: Akademiai Kaido.
    • Sasser, M. (1990). Identification of bacteria through fatty acid analysis. In Methods in Phytobacteriology, chapter I.11, pp. 199-204. Edited by Z. Klement, K. Rudolph & D. C. Sands. Budapest: Akademiai Kaido.
  • 22
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 23
    • 1142273245 scopus 로고    scopus 로고
    • Development of a plate technique for screening of polysaccharide-degrading microorganisms by using a mixture of insoluble chromogenic substrates
    • Ten, L. N., Im, W.-T., Kim, M.-K., Kang, M.-S. & Lee, S.-T. (2004). Development of a plate technique for screening of polysaccharide-degrading microorganisms by using a mixture of insoluble chromogenic substrates. J Microbiol Methods 56, 375-382.
    • (2004) J Microbiol Methods , vol.56 , pp. 375-382
    • Ten, L.N.1    Im, W.-T.2    Kim, M.-K.3    Kang, M.-S.4    Lee, S.-T.5
  • 24
    • 55949087121 scopus 로고    scopus 로고
    • Ten, L. N., Jung, H. M., Im, W. T., Yoo, S. A. & Lee, S. T. (2008). Lysobacter daecheongensis sp. nov., isolated from sediment of stream near the Daechung dam in South Korea. J Microbiol 46, 519-524.
    • Ten, L. N., Jung, H. M., Im, W. T., Yoo, S. A. & Lee, S. T. (2008). Lysobacter daecheongensis sp. nov., isolated from sediment of stream near the Daechung dam in South Korea. J Microbiol 46, 519-524.
  • 25
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 26
    • 0021350907 scopus 로고
    • Growth yield increase linked to caffeate reduction in Acetobacterium woodii
    • Tschech, A. & Pfennig, N. (1984). Growth yield increase linked to caffeate reduction in Acetobacterium woodii. Arch Microbiol 137, 163-167.
    • (1984) Arch Microbiol , vol.137 , pp. 163-167
    • Tschech, A.1    Pfennig, N.2
  • 28
    • 0001614970 scopus 로고
    • Gram-negative mesophilic sulfate-reducing bacteria
    • 2nd edn, pp, Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K. H. Schleifer. New York: Springer
    • Widdel, F. & Bak, F. (1992). Gram-negative mesophilic sulfate-reducing bacteria. In The Prokaryotes, 2nd edn, pp. 3352-3378. Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K. H. Schleifer. New York: Springer.
    • (1992) The Prokaryotes , pp. 3352-3378
    • Widdel, F.1    Bak, F.2
  • 29
    • 34250150693 scopus 로고    scopus 로고
    • Widdel, F., Kohring, G. & Mayer, F. (1983). Studies in dissimilatory sulfate-reducing bacteria that decompose fatty acids. III. Characterization of the filamentous gliding Desulfonema limicola gen. nov. sp. nov., and Desulfonema magnum sp. nov. Arch Microbiol 134, 286-294.
    • Widdel, F., Kohring, G. & Mayer, F. (1983). Studies in dissimilatory sulfate-reducing bacteria that decompose fatty acids. III. Characterization of the filamentous gliding Desulfonema limicola gen. nov. sp. nov., and Desulfonema magnum sp. nov. Arch Microbiol 134, 286-294.
  • 30
    • 31144473912 scopus 로고    scopus 로고
    • Dokdonella koreensis gen. nov., sp. nov., isolated from soil
    • Yoon, J.-H., Kang, S.-J. & Oh, T.-K. (2006). Dokdonella koreensis gen. nov., sp. nov., isolated from soil. Int J Syst Evol Microbiol 56, 145-150.
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 145-150
    • Yoon, J.-H.1    Kang, S.-J.2    Oh, T.-K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.