In vitro model assemblies to study the impact of lignin-carbohydrate interactions on the enzymatic conversion of xylan

Biomacromolecules

Volumn 10, Issue 9, 2009, Pages 2489-2498

  Boukari, Imen ^a,b   Putaux, Jean Luc ^c   Cathala, Bernard ^d   Barakat, Abdellatif ^a,b   Saake, Bodo ^e   Rémond, Caroline ^a,b   O'Donohue, Michael ^f,g,h   Chabbert, Brigitte ^a,b  

^a UMR614 FARE   (France)

^b UNIVERSITÉ DE REIMS CHAMPAGNE ARDENNE   (France)

^c UNIV GRENOBLE ALPES   (France)

^d INRA   (France)

^e vTI   (Germany)

^f INSA   (France)

^g UMR792 INGÉNIERIE DES SYSTÈMES BIOLOGIQUES ET DES PROCÉDÉS   (France)

^h CNRS   (France)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCONVERSION PROCESS; BIOREFINERY PROCESS; CARBOHYDRATE CHAINS; CELL WALL STRUCTURE; CELL WALLS; CONIFERYL ALCOHOLS; DEHYDROGENATION POLYMERS; DISAGGREGATION; ENDOXYLANASE; ENZYMATIC CONVERSIONS; ENZYME ACTION; GLUCURONOARABINOXYLAN; HIGH CONCENTRATION; HIGH MOLECULAR WEIGHT; IN-PLANTS; IN-VITRO; INTERCHAIN ASSOCIATIONS; LIGNIN MODEL COMPOUND; MODEL COMPLEXES; MODEL SYSTEM; NEGATIVE IMPACTS; NETWORK ORGANIZATION; OXIDATIVE POLYMERIZATION; POLYMER ASSEMBLIES; SELF-AGGREGATES; SUPRAMOLECULAR LEVEL; SUPRAMOLECULAR ORGANIZATIONS; XYLANASES;

BIOMASS; CARBOHYDRATES; CELL MEMBRANES; CELLULOSE; LIGNIN; POLYMERS; POLYSACCHARIDES; SUPRAMOLECULAR CHEMISTRY;

ENZYMES;

BACTERIAL ENZYME; CARBOHYDRATE; CONIFERYL ALCOHOL; GH11 ENDOXYLANASE; GLUCURONOARABINOXYLAN; LIGNIN; NANOCOMPOSITE; POLYMER; UNCLASSIFIED DRUG; XYLAN;

ARTICLE; BACTERIAL CELL WALL; BIOTRANSFORMATION; CELL STRUCTURE; CONCENTRATION (PARAMETERS); COVALENT BOND; DEHYDROGENATION; DEPOLYMERIZATION; ENZYME ACTIVITY; IN VITRO STUDY; INCUBATION TIME; LACTOBACILLUS; MOLECULAR INTERACTION; MOLECULAR WEIGHT; NONHUMAN; PARTICLE SIZE; POLYMERIZATION; PRIORITY JOURNAL; SUPRAMOLECULAR CHEMISTRY; THERMOBACILLUS XYLANILYTICUS;

BACTERIAL PROTEINS; CARBOHYDRATE CONFORMATION; CARBOHYDRATES; ENDO-1,4-BETA XYLANASES; LIGNIN; MODELS, MOLECULAR; XYLANS;

BIOMASS; CARBOHYDRATES; CELLULOSE; ENZYMES; LIGNINS; MEMBRANES; PARTICLE SIZE; POLYMERS; POLYSACCHARIDES;

THERMOBACILLUS XYLANILYTICUS;

EID: 70349176149     PISSN: 15257797     EISSN: None     Source Type: Journal    
DOI: 10.1021/bm9004518     Document Type: Article

References (60)

1. Sarkanen, K. V. In Lignins, occurrence, formation, structure and reactions; Sarkanen, K. V., Ludwig, C. H., Eds.; Wiley-Interscience: New York, 1971.
2. Atalla, R. H. Abstracts of Papers, 211th National Meeting of the American Chemical Society, New Orleans, LA, March 24-28, 1996; American Chemical Society: Washington, DC, 1996; 24.
3. Björkman, A. SVensk Papperstidning 1957, 60, 243-251.
4. Mooney, C. A.; Mansfield, S. D.; Touhy, M. G.; Saddler, J. N. Biores. Technol. 1998, 64, 113-119.
5. Sutcliffe, R.; Saddler, J. N. Biotechnol. Bioeng. Symp. 1986, 17, 749-762.
6. Sharma, A.; Milstein, O.; Vered, Y.; Gressel, J.; Flowers, H. M. Biotechnol. Bioeng. 1985, 27, 1095-1101.
7. Senior, D. J.; Mayers, P. R.; Breuil, C.; Saddler, J. N. In Biotechnology in Pulp and Paper Manufacture; Kirk, T. K., Chang, H.-M., Eds.; Butterworth-Heinemann: Boston, MA, 1990; Vol.16, pp 9-182.
8. Berlin, A.; Balakshin, M.; Gilkes, N.; Kadla, J.; Maximenko, V.; Kubo, S.; Saddler, J. J. Biotechnol. 2006, 125, 198-209.
9. Pan, X. J. Biobased Mater. Bioenergy 2008, 2, 25-32.
10. Chandra, R. P.; Bura, R.; Mabee, W. E.; Berlin, A.; Pan, X.; Saddler, J. N. Adv Biochem. Eng./Biotechnol. 2007, 108, 67-93.
11. Grabber, J. H.; Ralph, J.; Lapierre, C.; Barriere, Y. C. R. Biol. 2004, 327, 455-465.
12. Akin, D. E. Biofuels, Bioprod. Biorefin. 2008, 2, 288-303.
13. Zhu, L.; O'Dwyer, J. P.; Chang, V. S.; Granda, C. B.; Holtzapple, M. T. Bioresour. Technol. 2008, 99, 3817-3828.
14. Eriksson, J.; Malmsten, M.; Tiberg, F.; Callisen, T. H.; Damhus, T.; Johansen, K. S. Colloid Interface Sci. 2005, 284, 99-106.
15. Ciolacu, D.; Ciolacu, F.; Dumitriu, R.; Vasile, C.; Popa, V. I. Cellul. Chem. Technol. 2007, 41, 37-42.
16. Ciolacu, D.; Ciolacu, F.; Popa, V. I. Macromol. Symp. 2008, 272, 136-142.
17. Ahola, S.; Turon, X.; Osterberg, M.; Laine, J.; Rojas, O. J. Langmuir 2008, 24, 11592-11599.
18. Higuchi, T.; Ogino, K.; Tanahashi, M. Wood Res. 1971, 51, 1-11.
19. Ohnishi, J.; Watanabe, N.; Koshijima, T. Phytochemistry 1992, 31, 1185-1190.
20. Ralph, J.; Helm, R. F.; Quideau, S.; Hatfield, R. D. J. Chem. Soc., Perkin Trans. 1992, 1, 2961-2969.
21. Terashima, N.; Atalla, R. H.; Ralph, S. A.; Landucci, L. L.; Lapierre, C.; Monties, B. Holzforschung 1995, 49, 521-527.
22. Grabber, J. H.; Ralph, J.; Hatfield, R. D.; Quideau, S.; Kuster, T.; Pell, A. N. J. Agric. Food Chem. 1996, 44, 1453-1459.
23. Touzel, J. P.; Chabbert, B.; Monties, B.; Debeire, P.; Cathala, B. J. Agric. Food Chem. 2003, 51, 981-986.
24. Cathala, B.; Rondeau-Mouro, C.; Lairez, D.; Belval, F. B.; Durand, H.; Gorrichon, L.; Touzel, J. P.; Chabbert, B.; Monties, B. Plant Biosyst. 2005, 139, 93-97.
25. Barakat, A.; Winter, H.; Rondeau-Mouro, C.; Saake, B.; Chabbert, B.; Cathala, B. Planta 2007, 226, 267-281.
26. Debeire-Gosselin, M.; Loonis, M.; Samain, E.; Debeire, P. In Xylans and Xylanases; Visser, J., Beldman, G., Kusters-van Someren, M. A., Voragen, A. G. J., Eds.; Elsevier Science Publishers: New York, 1992; Vol.46, pp 3-466.
27. Harris, G. W.; Pickersgill, R. W.; Connerton, I.; Debeire, P.; Touzel, J.-P.; Breton, C.; Pérez, S. Proteins 1997, 29, 77-86.
28. Beaugrand, J.; Chambat, G.; Wong, V.; Goubet, F.; Remond, C.; Paës, G.; Paës, G.; Benamrouche, S.; Debeire, P.; O'Donohue, M.; Chabbert, B. Carbohydr. Res. 2004, 339, 2529-2540.
29. Benamrouche, S.; Crônier, D.; Debeire, P.; Chabbert, B. J. Cereal Sci. 2002, 36, 253-260.
30. Lequart, C.; Nuzillard, J. M.; Kurek, B.; Debeire, P. Carbohydr. Res. 1999, 319, 102-111.
31. Zilliox, C.; Debeire, P. Enzyme Microb. Technol. 1998, 22, 58-63.
32. Beg, Q. K.; Kapoor, M.; Mahajan, L.; Hoondal, G. S. Appl. Microbiol. Biotechnol. 2001, 56, 326-338.
33. Saha, B. C. J. Ind. Microbiol. Biotechnol. 2003, 30, 279-291.
34. Winter, H.; Barakat, A.; Cathala, B.; Saake, B. Macromol. Symp. 2006, 232, 74-84.
35. Ludley, F. H.; Ralph, J. J. Agric. Food Chem. 1996, 44, 2942-2943.
36. Courtin, C. M.; Van den Broeck, H.; Delcour, J. A. J. Chromatogr., A 2000, 866, 97-104.
37. Barakat, A.; Putaux, J. L.; Saulnier, L.; Chabbert, B.; Cathala, B. Biomacromolecules 2007, 8, 1236-1245.
38. Westbye, P.; Kohnke, T.; Glasser, W.; Gatenholm, P. Cellulose 2007, 14, 603-613.
39. Lebel, R. G.; Goring, D. A. I.; Timell, T. E. J. Polym. Sci., Part C: Polym. Symp. 1963, 2, 9-28.
40. Blake, J. D.; Richards, G. N. Carbohydr. Res. 1971, 18, 11-21.
41. Ebringerová, A.; Hromádková, Z.; Alföldi, J.; Berth, G. Carbohydr. Polym. 1992, 19, 99-105.
42. Esker, A.; Becker, U.; Jamin, S.; Beppu, S.; Renneckar, S.; Glasser, W. Hemicelluloses: science and technology. ACS Symp. Ser. 2004 (Gatenholm, P., Tenkanen, M. e., Eds.).
43. Roubroeks, J.; Saake, B.; Glasser, W.; Gatenholm, P. Hemicelluloses: science and technology. ACS Symp. Ser. 2004 (Gatenholm, P., Tenkanen, M. e., Eds.).
44. Saake, B.; Kruse, T.; Puls, J. Bioresour. Technol. 2001, 80, 195-204.
45. Linder, A.; Bergman, R.; Bodin, A.; Gatenholm, P. Langmuir 2003, 19, 5072-5077.
46. Suggett, A. In Polysaccharides; Franks, F., Ed.; Plenum: New York, N.Y., 1975; Vol.4.
47. Shigematsu, M.; Goto, A.; Yoshida, S.; Tanahashi, M.; Shinoda, Y. Mokuzai Gakkaishi 1994, 40, 1214-1218
48. Kalyanasundaram, K.; Thomas, J. K. J. Am. Chem. Soc. 1977, 99, 2039-2044.
49. Winnik, F. M.; Regismond, S. T. A. Colloids Surf., A 1996, 118, 1-39.
50. Barakat, A.; Chabbert, B.; Cathala, B. Phytochemistry 2007, 68, 2118-2125.
51. Biely, P.; Vršanska, M.; Tenkanen, M.; Kluepfel, D. J. Biotechnol. 1997, 57, 151-166.
52. Wyatt, P. J. Anal. Chim. Acta 1993, 272, 1-40.
53. Yaku, F.; Tsuji, S.; Koshijima, T. Holzforschung 1979, 33, 54-59
54. Ringena, O.; Lebioda, S.; Lehnen, R.; Saake, B. J. Chromatogr., A 2006, 1102, 154-163.
55. Uraki, Y.; Usukura, Y.; Kishimoto, T.; Ubukata, M. Holzforschung 2006, 60, 659-664.
56. Barakat, A.; Gaillard, C.; Lairez, D.; Saulnier, L.; Chabbert, B.; Cathala, B. Biomacromolecules 2008, 9, 487-493.
57. Putaux, J.-L.; Buléon, A.; Borsali, R.; Chanzy, H. Int. J. Biol. Macromol. 1999, 26, 145-150.
58. Sewalt, V. J. H.; Glasser, W. G.; Beauchemin, K. A. J. Agric. Food Chem. 1997, 45, 1823-1828.
59. Grabber, J. H.; Hatfield, R. D.; Ralph, J. J. Agric. Food Chem. 2003, 51, 4984-5498
60. Saake, B.; Argyropoulos, D. S.; Beinhoff, O.; Faix, O. Phytochemistry 1996, 43, 499-507.