메뉴 건너뛰기




Volumn 107, Issue 4, 2009, Pages 1219-1229

A new set of PCR assays for the identification of multiple human adenovirus species in environmental samples

Author keywords

Amplification efficiency; Hexon gene; Human adenoviruses; Municipal wastewater; Polymerase chain reaction

Indexed keywords

CHAINS; CLONING; EFFICIENCY; GENES;

EID: 70349154965     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2009.04300.x     Document Type: Article
Times cited : (18)

References (31)
  • 1
    • 0026631229 scopus 로고
    • Detection of adenoviruses in stools from healthy persons and patients with diarrhea by two-step polymerase chain reaction
    • Allard, A., Albinsson, B. Wadell, G. (1992) Detection of adenoviruses in stools from healthy persons and patients with diarrhea by two-step polymerase chain reaction. J Med Virol 37, 149 157.
    • (1992) J Med Virol , vol.37 , pp. 149-157
    • Allard, A.1    Albinsson, B.2    Wadell, G.3
  • 2
    • 0035125380 scopus 로고    scopus 로고
    • Rapid typing of human adenoviruses by a general PCR combined with restriction endonuclease analysis
    • Allard, A., Albinsson, B. Wadell, G. (2001) Rapid typing of human adenoviruses by a general PCR combined with restriction endonuclease analysis. J Clin Microbiol 39, 498 505.
    • (2001) J Clin Microbiol , vol.39 , pp. 498-505
    • Allard, A.1    Albinsson, B.2    Wadell, G.3
  • 3
    • 0025204092 scopus 로고
    • Polymerase chain reaction for detection of adenovirus in stool samples
    • Allard, A., Girones, R., Juto, P. Wadell, G. (1990) Polymerase chain reaction for detection of adenovirus in stool samples. J Clin Microbiol 28, 2659 2667.
    • (1990) J Clin Microbiol , vol.28 , pp. 2659-2667
    • Allard, A.1    Girones, R.2    Juto, P.3    Wadell, G.4
  • 4
    • 0035113376 scopus 로고    scopus 로고
    • Rapid and sensitive diagnosis of human adenovirus infections by generic polymerase chain reaction
    • Avellón, A., Perez, P., Aguilar, J.C., Ortiz de Lejarazu, R. Echevarria, J.E. (2001) Rapid and sensitive diagnosis of human adenovirus infections by generic polymerase chain reaction. J Virol Methods 92, 113 120.
    • (2001) J Virol Methods , vol.92 , pp. 113-120
    • Avellón, A.1    Perez, P.2    Aguilar, J.C.3    Ortiz De Lejarazu, R.4    Echevarria, J.E.5
  • 5
    • 24944568542 scopus 로고    scopus 로고
    • Taxonomy and classification of viruses
    • ed. Murray, P.R. Baron, E.J. Jorgensen, J.H. Pfaller, M.A. Yolken, R.H. Washington DC, USA. American Society for Microbiology Press
    • Büchen-Osmond, C. (2003) Taxonomy and classification of viruses. In Manual of Clinical Microbiology, 8th edn ed. Murray, P.R., Baron, E.J., Jorgensen, J.H., Pfaller, M.A. Yolken, R.H. pp. 1217 1226. Washington DC, USA : American Society for Microbiology Press.
    • (2003) Manual of Clinical Microbiology, 8th Edn , pp. 1217-1226
    • Büchen-Osmond, C.1
  • 7
    • 32044447431 scopus 로고    scopus 로고
    • Real-time PCR quantification of human adenoviruses in urban rivers indicates genome prevalence but low infectivity
    • Choi, S. Jiang, S.C. (2005) Real-time PCR quantification of human adenoviruses in urban rivers indicates genome prevalence but low infectivity. Appl Environ Microbiol 71, 7426 7433.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 7426-7433
    • Choi, S.1    Jiang, S.C.2
  • 8
    • 26644461559 scopus 로고    scopus 로고
    • EPA. Chapter 14. EPA 600/4-84/013 (N14). Washington, DC. Office of Research and Development, United States Environmental Protection Agency
    • EPA 2001) USEPA Manual of Methods for Virology, Chapter 14. EPA 600/4-84/013 (N14). Washington, DC : Office of Research and Development, United States Environmental Protection Agency.
    • (2001) USEPA Manual of Methods for Virology
  • 10
    • 0006128731 scopus 로고
    • Adenoviridae
    • ed. Hsiungs, C.D. New Haven, CT, USA. Yale University Press
    • Fong, C.K.Y. (1994) Adenoviridae. In Diagnostic Virology, 4th edn ed. Hsiungs, C.D. pp. 232 235. New Haven, CT, USA : Yale University Press.
    • (1994) Diagnostic Virology, 4th Edn , pp. 232-235
    • Fong, C.K.Y.1
  • 15
    • 0036729786 scopus 로고    scopus 로고
    • Environmental factors influencing human viral pathogens and their potential indicator organisms in the blue mussel, Mtilus edulis: The first Scandinavian report
    • Hernroth, B.E., Conden-Hansson, A.-C., Rehnstam-Holm, A.-S., Girones, R. Allard, A.K. (2002) Environmental factors influencing human viral pathogens and their potential indicator organisms in the blue mussel, Mtilus edulis: the first Scandinavian report. Appl Environ Microbiol 68, 4523 4533.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 4523-4533
    • Hernroth, B.E.1    Conden-Hansson, A.-C.2    Rehnstam-Holm, A.-S.3    Girones, R.4    Allard, A.K.5
  • 16
    • 0002344174 scopus 로고
    • Adenoviruses
    • ed. Lennette, E.H. Lennette, D.A. Lennette, E.T. Washington, DC, USA. American Public Health Association
    • Hierholzer, J.C. (1995) Adenoviruses. In Diagnostic Procedures for Viral, Rickettsial, and Chlamydial Infections, 7th edn ed. Lennette, E.H., Lennette, D.A. Lennette, E.T. pp. 169 188. Washington, DC, USA : American Public Health Association.
    • (1995) Diagnostic Procedures for Viral, Rickettsial, and Chlamydial Infections, 7th Edn , pp. 169-188
    • Hierholzer, J.C.1
  • 17
    • 36549065268 scopus 로고    scopus 로고
    • Quantitative analysis of human enteric adenoviruses in aquatic environments
    • Horamoto, D., Katayama, H., Oguma, K. Ohgaki, S. (2007) Quantitative analysis of human enteric adenoviruses in aquatic environments. J Appl Microbiol 103, 2153 2159.
    • (2007) J Appl Microbiol , vol.103 , pp. 2153-2159
    • Horamoto, D.1    Katayama, H.2    Oguma, K.3    Ohgaki, S.4
  • 18
    • 85153304981 scopus 로고    scopus 로고
    • International Committee on Taxonomy of Viruses (ICTV). Available at
    • International Committee on Taxonomy of Viruses (ICTV) 2008) The Universal Virus Database of the International Committee on Taxonomy of Viruses. Available at: http://www.ncbi.nlm.nih.gov/ICTVdb/.
    • (2008)
  • 19
    • 33845341846 scopus 로고    scopus 로고
    • Human adenoviruses in water: Occurrence and health implications: A critical review
    • Jiang, S.C. (2006) Human adenoviruses in water: occurrence and health implications: a critical review. Environ Sci Technol 40, 7132 7140.
    • (2006) Environ Sci Technol , vol.40 , pp. 7132-7140
    • Jiang, S.C.1
  • 20
    • 20444410725 scopus 로고    scopus 로고
    • Quantitative real-time PCR assays for detection of human adenoviruses and identification of serotypes 40 and 41
    • Jothikumar, N., Cromeans, T.L., Hill, V.R., Lu, X., Sobsey, M.D. Erdman, D.D. (2005) Quantitative real-time PCR assays for detection of human adenoviruses and identification of serotypes 40 and 41. Appl Environ Microbiol 71, 3131 3136.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 3131-3136
    • Jothikumar, N.1    Cromeans, T.L.2    Hill, V.R.3    Lu, X.4    Sobsey, M.D.5    Erdman, D.D.6
  • 21
    • 20444450075 scopus 로고    scopus 로고
    • Rapid detection of infectious adenoviruses by mRNA real-time RT-PCR
    • Ko, G., Jothikumar, N., Hill, V.R. Sobsey, M.D. (2005) Rapid detection of infectious adenoviruses by mRNA real-time RT-PCR. J Virol Methods 127, 148 153.
    • (2005) J Virol Methods , vol.127 , pp. 148-153
    • Ko, G.1    Jothikumar, N.2    Hill, V.R.3    Sobsey, M.D.4
  • 22
    • 17644414904 scopus 로고    scopus 로고
    • The simultaneous detection of both enteroviruses and adenoviruses in environmental water samples including tap water with an integrated cell culture-multiplex-nested PCR procedure
    • Lee, S.-H., Lee, C., Lee, K.W., Cho, H.B. Kim, S.-J. (2005) The simultaneous detection of both enteroviruses and adenoviruses in environmental water samples including tap water with an integrated cell culture-multiplex- nested PCR procedure. J Appl Microbiol 98, 1020 1029.
    • (2005) J Appl Microbiol , vol.98 , pp. 1020-1029
    • Lee, S.-H.1    Lee, C.2    Lee, K.W.3    Cho, H.B.4    Kim, S.-J.5
  • 23
    • 0032996447 scopus 로고    scopus 로고
    • Use of restriction fragment analysis and sequencing of a serotype-specific region to type adenovirus isolates
    • Li, Q.G., Henningsson, A., Juto, P., Elgh, F. Wadell, G. (1999) Use of restriction fragment analysis and sequencing of a serotype-specific region to type adenovirus isolates. J Clin Microbiol 37, 844 847.
    • (1999) J Clin Microbiol , vol.37 , pp. 844-847
    • Li, Q.G.1    Henningsson, A.2    Juto, P.3    Elgh, F.4    Wadell, G.5
  • 24
    • 33746172085 scopus 로고    scopus 로고
    • Molecular typing of human adenoviruses by PCR and sequencing of a partial region of the hexon gene
    • Lu, X. Erdman, D.D. (2006) Molecular typing of human adenoviruses by PCR and sequencing of a partial region of the hexon gene. Arch Virol 151, 1587 1602.
    • (2006) Arch Virol , vol.151 , pp. 1587-1602
    • Lu, X.1    Erdman, D.D.2
  • 25
    • 0028122067 scopus 로고
    • Detection of adenoviruses and enteroviruses in polluted waters by nested PCR amplification
    • Puig, M., Jofre, J., Lucena, F., Allard, A., Wadell, W. Girones, R. (1994) Detection of adenoviruses and enteroviruses in polluted waters by nested PCR amplification. Appl Environ Microbiol 60, 2963 2970.
    • (1994) Appl Environ Microbiol , vol.60 , pp. 2963-2970
    • Puig, M.1    Jofre, J.2    Lucena, F.3    Allard, A.4    Wadell, W.5    Girones, R.6
  • 26
    • 0031608937 scopus 로고    scopus 로고
    • An introduction to PCR primer design and optimization of amplification reactions
    • ed. Lincoln, P.J. Thomson, J. Totowa, NJ, USA. Humana Press Inc
    • Robertson, J.M. Walsh-Weller, J. (1998) An introduction to PCR primer design and optimization of amplification reactions. In Methods in Molecular Biology (98): Forensic DNA Profiling Protocols ed. Lincoln, P.J. Thomson, J. pp. 121 154. Totowa, NJ, USA : Humana Press Inc.
    • (1998) Methods in Molecular Biology (98): Forensic DNA Profiling Protocols , pp. 121-154
    • Robertson, J.M.1    Walsh-Weller, J.2
  • 27
    • 2442573610 scopus 로고    scopus 로고
    • A simple and rapid single-step multiplex RT-PCR to detect Norovirus, Astrovirus, and Adenovirus in clinical stool samples
    • Rohayem, J., Berger, S., Juretzek, T., Herchenröder, O., Mogel, M., Poppe, M., Henker, J. Rethwilm, A. (2004) A simple and rapid single-step multiplex RT-PCR to detect Norovirus, Astrovirus, and Adenovirus in clinical stool samples. J Virol Methods 118, 49 59.
    • (2004) J Virol Methods , vol.118 , pp. 49-59
    • Rohayem, J.1    Berger, S.2    Juretzek, T.3    Herchenröder, O.4    Mogel, M.5    Poppe, M.6    Henker, J.7    Rethwilm, A.8
  • 28
    • 0003070714 scopus 로고    scopus 로고
    • Adenoviruses
    • ed. Richmond, D.D. Hayden, F.G. NY, USA. Churchill Livingstone
    • Ruuskanen, O., Meurman, O. Akusjarvi, G. (1997) Adenoviruses. In Clinical Virology ed. Richmond, D.D. Hayden, F.G. pp. 525 547. NY, USA : Churchill Livingstone.
    • (1997) Clinical Virology , pp. 525-547
    • Ruuskanen, O.1    Meurman, O.2    Akusjarvi, G.3
  • 29
    • 4644229477 scopus 로고    scopus 로고
    • Adenoviruses
    • ed. Murray, P.R. Baron, E.J. Jorgensen, J.H. Pfaller, M.A. Yolken, R.H. Washington, DC, USA. American Society for Microbiology Press
    • Swenson, P.D., Wadell, G., Allard, A. Hierholzer, J.C. (2003) Adenoviruses. In Manual of Clinical Microbiology, 8th edn ed. Murray, P.R., Baron, E.J., Jorgensen, J.H., Pfaller, M.A. Yolken, R.H. pp. 1404 1417. Washington, DC, USA : American Society for Microbiology Press.
    • (2003) Manual of Clinical Microbiology, 8th Edn , pp. 1404-1417
    • Swenson, P.D.1    Wadell, G.2    Allard, A.3    Hierholzer, J.C.4
  • 30
    • 37349039374 scopus 로고    scopus 로고
    • Occurrence of human adenoviruses at two recreational beaches of the Great Lakes
    • Xagoraraki, I., Kuo, D.H.-W., Wong, K., Wong, M. Rose, J.B. (2007) Occurrence of human adenoviruses at two recreational beaches of the Great Lakes. Appl Environ Microbiol 73, 7874 7881.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 7874-7881
    • Xagoraraki, I.1    Kuo, D.H.-W.2    Wong, K.3    Wong, M.4    Rose, J.B.5
  • 31
    • 0034461598 scopus 로고    scopus 로고
    • Species-specific identification of human adenoviruses by a multiplex PCR assay
    • Xu, W., McDonough, M.C. Erdman, D.D. (2000) Species-specific identification of human adenoviruses by a multiplex PCR assay. J Clin Microbiol 38, 4114 4120.
    • (2000) J Clin Microbiol , vol.38 , pp. 4114-4120
    • Xu, W.1    McDonough, M.C.2    Erdman, D.D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.