Genetic engineering of Enterobacter asburiae strain JDR-1 for efficient production of ethanol from hemicellulose hydrolysates

Applied and Environmental Microbiology

Volumn 75, Issue 18, 2009, Pages 5743-5749

  Bi, Changhao ^a   Zhang, Xueli ^a   Ingram, Lonnie O ^a   Preston, James F ^a  

^a UNIVERSITY OF FLORIDA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACID FERMENTATION; AGRICULTURAL RESIDUE; ALCOHOL DEHYDROGENASE; CELLULOSE FRACTION; DILUTE ACID PRETREATMENT; DILUTE-ACID HYDROLYSATE; DRY WEIGHT; EFFICIENT PRODUCTION; ENERGY CROPS; ENTEROBACTER; ETHANOL YIELD; HEMICELLULOSE HYDROLYSATES; PYRUVATE DECARBOXYLASE; PYRUVATE FORMATE LYASE; SWEET GUM; ZYMOMONAS MOBILIS;

ACIDS; AGRICULTURAL WASTES; BIOCATALYSTS; CROPS; ENZYMES; ESCHERICHIA COLI; ETHANOL; FERMENTATION; GENETIC ENGINEERING;

CELLULOSE;

ACETIC ACID; ALCOHOL; ALCOHOL DEHYDROGENASE; BACTERIAL ENZYME; CELLULOSE; FORMATE ACETYLTRANSFERASE; HEMICELLULOSE; METHYLGLUCURONOXYLOSE; PROTEIN HYDROLYSATE; PYRUVATE DECARBOXYLASE; PYRUVIC ACID; UNCLASSIFIED DRUG; XYLAN; XYLOSE;

BACTERIUM; CELLULOSE; GENETIC ENGINEERING; HYDROLYSIS; TRANSFORMATION;

ALCOHOL PRODUCTION; ARTICLE; BACTERIAL GENE; BACTERIAL STRAIN; BACTERIUM ISOLATION; BACTERIUM TRANSFORMATION; CATALYST SUPPORT; CONTROLLED STUDY; ENTEROBACTER; ENTEROBACTER ASBURIAE; ENZYME ACTIVITY; ESCHERICHIA COLI; FERMENTATION; GENE DELETION; GENETIC ENGINEERING; NONHUMAN; NUCLEOTIDE SEQUENCE; PLASMID; WILD TYPE; WOOD; ZYMOMONAS MOBILIS;

ACETIC ACID; ACETYLTRANSFERASES; ALCOHOL DEHYDROGENASE; DNA, BACTERIAL; ENTEROBACTER; ETHANOL; GENETIC ENGINEERING; METABOLIC NETWORKS AND PATHWAYS; MOLECULAR SEQUENCE DATA; POLYSACCHARIDES; PYRUVATE DECARBOXYLASE; SEQUENCE ANALYSIS, DNA; WOOD; XYLOSE; ZYMOMONAS;

ACIDS; CATALYSTS; CELLULOSE; ENZYMES; ETHANOL; FARM CROPS; FERMENTATION; GENETIC ENGINEERING; PLANT RESIDUES;

ENTEROBACTER ASBURIAE; ESCHERICHIA COLI; LIQUIDAMBAR STYRACIFLUA; ZYMOMONAS MOBILIS;

EID: 70149099370     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.01180-09     Document Type: Article

References (28)

1. Alterthum, F., and L. O. Ingram. 1989. Efficient ethanol production from xylose, lactose, and glucose by recombinant Escherichia coli. Appl. Environ. Microbiol. 55:1943-1948.
2. Bi, C., J. D. Rice, and J. F. Preston. 2009. Complete fermentation of xylose and methylglucuronoxylose derived from methylglucuronoxylan by Enterobacter asburiae strain JDR-1. Appl. Environ. Microbiol. 75:395-404.
3. Bi, C., X. Zhang, J. D. Rice, L. O. Ingram, and J. F. Preston. 6 June 2009. Genetic engineering of Enterobacter asburiae strain JDR-1 for efficient D(-)-lactic acid production from hemicellulose hydrolysate. Biotechnol. Lett. [Epub ahead of print.] doi:10.1007/s10529-009-0044-z.
4. Conway, T., G. W. Sewell, Y. A. Osman, and L. O. Ingram. 1987. Cloning and sequencing of the alcohol dehydrogenase II gene from Zymomonas mobilis. J. Bacteriol. 169:2591-2597.
5. Datsenko, K. A., and B. L. Wanner. 2000. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl. Acad. Sci. USA 97:6640-6645.
6. Dien, B. S., M. A. Cotta, and T. W. Jeffries. 2003. Bacteria engineered for fuel ethanol production: current status. Appl. Microbiol. Biotechnol. 63:258-266.
7. Dien, B. S., H. J. G. Jung, K. P. Vogel, M. D. Casler, J. F. S. Lamb, L. Iten, R. B. Mitchell, and G. Sarath. 2006. Chemical composition and response to dilute-acid pretreatment and enzymatic saccharification of alfalfa, reed canarygrass, and switchgrass. Biomass Bioenergy 30:880-891.
8. Dubois, M., K. A. Gilles, J. K. Hamilton, P. A. Rebers, and F. Smith. 1956. Colorimetric method for determination of sugars and related substances. Anal. Chem. 28:350-356.
9. Hurlbert, J. C., and J. F. Preston. 2001. Functional characterization of a novel xylanase from a corn strain of Erwinia chrysanthemi. J. Bacteriol. 183:2093-2100.
10. Ingram, L. O., and T. Conway. 1988. Expression of different levels of ethanologenic enzymes from Zymomonas mobilis in recombinant strains of Escherichia coli. Appl. Environ. Microbiol. 54:397-404.
11. Ingram, L. O., T. Conway, D. P. Clark, G. W. Sewell, and J. F. Preston. 1987. Genetic engineering of ethanol production in Escherichia coli. Appl. Environ. Microbiol. 53:2420-2425.
12. Jacobs, A., P. T. Larsson, and O. Dahlman. 2001. Distribution of uronic acids in xylans from various species of soft- and hardwood as determined by MALDI mass spectrometry. Biomacromolecules 2:979-990. (Pubitemid 32894659)
13. Jantama, K., M. J. Haupt, S. A. Svoronos, X. Zhang, J. C. Moore, K. T. Shanmugam, and L. O. Ingram. 2008. Combining metabolic engineering and metabolic evolution to develop nonrecombinant strains of Escherichia coli C that produce succinate and malate. Biotechnol. Bioeng. 99:1140-1153.
14. Jarboe, L. R., T. B. Grabar, L. P. Yomano, K. T. Shanmugan, and L. O. Ingram. 2007. Development of ethanologenic bacteria. Adv. Biochem. Eng. Biotechnol. 108:237-261.
15. Kardosova, A., M. Matulova, and A. Malovikova. 1998. (4-O-methyl-alpha-D- glucurono)-D-xylan from Rudbeckia fulgida, var. sullivantii (Boynton et Beadle). Carbohydr. Res. 308:99-105.
16. Ohta, K., D. S. Beall, J. P. Mejia, K. T. Shanmugam, and L. O. Ingram. 1991. Genetic improvement of Escherichia coli for ethanol production chromosomal integration of Zymomonas mobilis genes encoding pyruvate decarboxylase and alcohol dehydrogenase II. Appl. Environ. Microbiol. 57:893-900.
17. Ohta, K., D. S. Beall, J. P. Mejia, K. T. Shanmugam, and L. O. Ingram. 1991. Metabolic engineering of Klebsiella oxytoca M5A1 for ethanol production from xylose and glucose. Appl. Environ. Microbiol. 57:2810-2815.
18. Pordesimo, L. O., B. R. Hames, S. Sokhansanj, and W. C. Edens. 2005. Variation in corn stover composition and energy content with crop maturity. Biomass Bioenergy 28:366-374. (Pubitemid 40218042)
19. Puchta, H., and B. Hohn. 1991. A transient assay in plant cells reveals a positive correlation between extrachromosomal recombination rates and length of homologous overlap. Nucleic Acids Res. 19:2693-2700. (Pubitemid 21896906)
20. Rodriguez, M., E. A. Martinez, S. W. York, K. Zuobi-Hasona, L. O. Ingram, K. T. Shanmugam, and J. F. Preston. 2001. Properties of the hemicellulose fractions of lignocellulosic biomass affecting bacterial ethanol production, p. 535. Abstr. 101st Gen. Meet. Am. Soc. Microbiol. American Society for Microbiology, Washington, DC.
21. Saha, B. C. 2003. Hemicellulose bioconversion. J. Ind. Microbiol. Biotechnol. 30:279-291.
22. Saha, B. C., L. B. Iten, M. A. Cotta, and Y. V. Wu. 2005. Dilute acid pretreatment, enzymatic saccharification, and fermentation of rice hulls to ethanol. Biotechnol. Progr. 21:816-822.
23. Sun, J. X., X. F. Sun, R. C. Sun, and Y. Q. Su. 2004. Fractional extraction and structural characterization of sugarcane bagasse hemicelluloses. Carbohydr. Polym. 56:195-204.
24. Sun, R. C., J. M. Fang, J. Tomkinson, Z. C. Geng, and J. C. Liu. 2001. Fractional isolation, physico-chemical characterization and homogeneous esterification of hemicelluloses from fast-growing poplar wood. Carbohydr. Polym. 44:29-39.
25. Timell, T. E. 1964. Wood hemicelluloses. 1. Adv. Carbohydr. Chem. 19:247-302.
26. Wood, B. E., L. P. Yomano, S. W. York, and L. O. Ingram. 2005. Development of industrial-medium-required elimination of the 2,3-butanediol fermentation pathway to maintain ethanol yield in an ethanologenic strain of Klebsiella oxytoca. Biotechnol. Progr. 21:1366-1372.
27. Zhang, X., K. Jantama, J. C. Moore, K. T. Shanmugam, and L. O. Ingram. 2007. Production of L-alanine by metabolically engineered Escherichia coli. Appl. Microbiol. Biotechnol. 77:355-366.
28. Zucker, M., and L. Hankin. 1970. Regulation of pectate lyase synthesis in Pseudomonas fluorescens and Erwinia carotovora. J. Bacteriol. 104:13-18.