Comparison of different objective functions for parameterization of simple respiration models

Journal of Geophysical Research: Biogeosciences

Volumn 113, Issue 3, 2008, Pages

  Van Wijk, M T ^c   Van Putten, B ^c   Hollinger, D Y ^a   Richardson, A D ^b  

^a USDA FOREST SERVICE   (United States)

^b UNIVERSITY OF NEW HAMPSHIRE   (United States)

^c WAGENINGEN UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

CARBON DIOXIDE; COMPARATIVE STUDY; EDDY COVARIANCE; FLUX MEASUREMENT; MEASUREMENT METHOD; PARAMETERIZATION; RESPIRATION; UNCERTAINTY ANALYSIS;

EID: 69549103281     PISSN: 01480227     EISSN: None     Source Type: Journal    
DOI: 10.1029/2007JG000643     Document Type: Article

References (38)

1. Black, T. A., et al. (1996 Annual cycles of water vapour and carbon dioxide fluxes in and above a boreal aspen forest, Global Change Biol., 2, 219-229. (Pubitemid 27002704)
2. Braswell, B. H., W. J. Sacks, E. Linder, and D. S. Schimel (2005), Estimating diurnal to annual ecosystem parameters by synthesis of a carbon flux model with eddy covariance net ecosystem exchange observations, Global Change Biol., 11, 335-355.
3. Dewar, R. C. (2000), A model of the coupling between respiration, active processes and passive transport, Ann. Bot., 86, 279-286.
4. Edwards, A. F. M. (1972), Likelihood: An Account of the Statistical Concept of Likelihood and Its Application to Scientific Inference, 235 pp., Cambridge Univ. Press, London.
5. Falge, E., et al. (2001), Gap filling strategies for defensible annual sums of net ecosystem exchange, Agrie. For. Meteorol., 107, 43-69. (Pubitemid 32176659)
6. Gifford, R. M. (2003), Plant respiration in productivity models: Conceptualisation, representation and issues for global terrestrial carbon-cycle research, Functional Plant Biol., 30, 171-186.
7. Hagen, S. C., B. H. Braswell, E. Linder, S. Frolking, A. D. Richardson, and D. Hollinger (2006), Statistical uncertainty of eddy flux-based estimates of gross ecosystem carbon exchange at Howland Forest, Maine, J. Geophys. Res., 3, D08S03, doi:10.1029/2005JD006154.
8. Hogg, R. V., J. W. McKean, and A. T. Craig (2005), Introduction to Mathematical Statistics, 6th ed., Prentice-Hall, Upper Saddle River, N. J.
9. Hollinger, D. Y., and A. D. Richardson (2005), Uncertainty in eddy covariance measurements and its application to physiological models, Tree Physiology, 25, 873-885.
10. Hollinger, D. Y., S. M. Goltz, E. A. Davidson, J. T. Lee, K. Tu, and H. T. Valentine (1999), Seasonal patterns and environmental control of carbon dioxide and water vapour exchange in an ecotonal boreal forest, Global Change Biol., 5, 891-902.
11. 2 exchange, Global Change Biol., 10,1689-1706.
12. Janssen, P. H. M., and P. S. C. Heuberger (1995), Calibration of processoriented models, Ecol. Modell., 83, 55-66.
13. Lagartas, J. C., J. A. Reeds, M. H. Wright, and P. E. Wright (1998), Convergence properties of the Nelder-Mead simplex method in low dimensions, SIAM J. Control Optim., 9, 112-147.
14. Lehmann, E. L., J. P. Romano, G. Casella, S. Fienberg, and I. Olkin (2005), Testing Statistical Hypotheses, 3rd ed., Springer, New York.
15. Lloyd, J., and J. A. Taylor (1994), On the temperature dependence of soil respiration, Functional Ecol., 8, 315-323.
16. Massman, W. J. (2000 A simple method for estimating frequency response corrections for eddy covariance systems, Agrie. For. Meteorol., 104, 185-198. (Pubitemid 30647969)
17. 2 exchange using eddy covariance data: Some perils and pitfalls, Tree Physiology, 25, 839-857.
18. Moffat, A. M., et al. (2007), Comprehensive comparison of gap filling techniques for eddy covariance net carbon fluxes, Agric. For. Meteorol., 147, 209-232.
19. Owen, K. E., et al. (2007), Linking flux network measurements to continental scale simulations: Ecosystem carbon dioxide exchange capacity under non-water-stressed conditions, Global Change Biol., 13,734-760.
20. Reichstein, M., et al. (2005), On the separation of net ecosystem exchange into assimilation and ecosystem respiration: Review and improved algorithm, Global Change Biol., 11, 1424-1439.
21. Richardson, A. D., and D. Y. Hollinger (2005), Statistical modeling of ecosystem respiration using eddy covariance data: Maximum likelihood parameter estimation, and Monte Carlo simulation of model and parameter uncertainty, simulation of model and parameter uncertainty, applied to three simple models, Agrie. For. Meteorol., 131, 191-208.
22. Richardson, A. D., et al. (2006a), Comparing simple respiration models for eddy flux and dynamic chamber data. Agric. For. Meteorol., 141, 219234.
23. Richardson, A. D., et al. (2006b), A multi-site analysis of random error in tower-based measurements of carbon and energy fluxes, Agric. For. Meteorol., 136, 1-18.
24. Richardson, A. D., D. Hollinger, J. D. Aber, S. V. Ollinger, and B. H. Braswell (2007), Environmental variation is directly responsible for short- but not long-term variation in forest-atmosphere carbon exchange, Global Change Biol., 13, 788-803.
25. Schwalm, C. R., T. A. Black, K. Morgenstern, and E. R. Humphreys (2007), A method for deriving primary productivity and component respiratory fluxes from tower-based eddy covariance data: a case study using a 17-year data record from a Douglas-fir chronosequence, Global Change Biol., 13, 370-385.
26. Stay, P. C., G. G. Katul, M. B. S. Siqueira, J.-Y. Juang, K. A. Novick, J. M. Uebelherr, and R. Oren (2006), An evaluation of models for partitioning eddy covariance-measured net ecosystem exchange into photosynthesis and respiration, Agrie. For. Meteorol., 141, 2-18.
27. Trudinger, C. M., et al. (2007), OptIC project: An intercomparison of optimization techniques for parameter estimation in terrestrial biogeochemical models, J. Geophys. Res., 112, G02027, doi: 10.1029/ 2006JG000367.
28. Van't Hoff, J. H. (1898), Lectures on Theoretical and Physical Chemistry. Part I. Chemical Dynamics (translated by R. A. Lehfeldt), pp. 224-229, Edward Arnold, London.
29. van Wijk, M. T., and W. Bouten (2002), Simulating daily and half-hourly fluxes of forest carbon dioxide and water vapor exchange with a simple model of light and water use, Ecosystems, 5, 597-610.
30. van Wijk, M. T., W. Bouten, and J. M. Verstraten (2002), Comparison of different modelling strategies for simulating gas exchange of a Douglasfir forest, Ecol. Modell., 158, 63-31.
31. Vrugt, J. A., and B. A. Robinson (2007), Improved evolutionary optimization from genetically adaptive multimethod search, Proc. Natl. Acad. Sci., 104, 708-711.
32. Vrugt, J. A., W. Bouten, H. V. Gupta, and J. W. Hopmans (2003a), Toward improved identifiability of soil hydraulic parameters: On the selection of a suitable parametric model, Vadose Zone J., 2, 98-113.
33. Vrugt, J. A., H. V. Gupta, L. A. Bastidas, W. Bouten, and S. Sorooshian (2003b), Effective and efficient algorithm for multi-objective optimization of hydrologie models, Water Resour. Res., 39(8), 1214, doi:10.1029/ 2002WR001746.
34. Wang, Y. P., D. Baldocchi, R. Leuning, E. Falge, and T. Vesala (2006), Estimating parameters in a land-surface model by applying nonlinear inversion to eddy covariance flux measurements from eight FLUXNET sites, Global Change Biol., 12, 1-19.
35. Wasserman, L. (2007), All of Nonparametric Statistics, 268 pp., Springer, New York.
36. Williams, M., E. B. Rastetter, D. N. Fernandes, M. L. Goulden, G. R. Shaver, and L. C. Johnson (1997 Predicting gross primary productivity in terrestrial ecosystems, Ecol. Appl., 7, 882-894. (Pubitemid 27482028)
37. Williams, M., E. B. Rastetter, G. R. Shaver, J. E. Hobbie, E. Carpino, and B. L. Kwiatkowsky (2001 Primary production of an arctic watershed: An uncertainty analysis, Ecol. Appl., 11, 1800-1816. (Pubitemid 34004014)
38. Williams, M., L. E. Street, M. T. van Wijk, and G. R. Shaver (2006), Identifying differences in carbon exchange among arctic ecosystem types, Ecosystems, 9, 288-304.