Marinobacter lacisalsi sp. nov., a moderately halophilic bacterium isolated from the saline-wetland wildfowl reserve Fuente de Piedra in southern Spain

International Journal of Systematic and Evolutionary Microbiology

Volumn 59, Issue 7, 2009, Pages 1691-1695

  Aguilera, Margarita ^a   Jiménez Pranteda, Maria L ^a   Kharroub, Karima ^a,b   González Paredes, Ana ^a   Durban, Juan J ^a   Russell, Nick J ^c   Ramos Cormenzana, Alberto ^a   Monteoliva Sánchez, Mercedes ^a  

^a UNIVERSITY OF GRANADA   (Spain)

^b Universite Mentouri Constantine   (Algeria)

^c IMPERIAL COLLEGE LONDON   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

AMOXICILLIN; AMPICILLIN; BACTERIAL DNA; CARBON; CARBOXYLIC ACID; CHLORAMPHENICOL; ERYTHROMYCIN; FATTY ACID; NALIDIXIC ACID; PENICILLIN G; POLYMYXIN B; RIFAMPICIN; RNA 16S; SODIUM CHLORIDE; STREPTOMYCIN; FRESH WATER;

AEROBIC BACTERIUM; ANTIBIOTIC SENSITIVITY; ARTICLE; BACTERIAL GROWTH; BACTERIAL METABOLISM; BACTERIAL STRAIN; BACTERIUM COLONY; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; CELL MOTILITY; CHEMOTAXONOMY; CONTROLLED STUDY; DNA CONTENT; GRAM NEGATIVE BACTERIUM; HALOPHILIC BACTERIUM; MARINOBACTER; MARINOBACTER BRYOZOORUM; MARINOBACTER GUDAONENSIS; MARINOBACTER LACISALSI; MARINOBACTER SEGNICRESCENS; MOLECULAR PHYLOGENY; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PRIORITY JOURNAL; RNA SEQUENCE; SEQUENCE HOMOLOGY; SPAIN; STRAIN DIFFERENCE; TYPE STRAIN; WETLAND; WILDLIFE; CLASSIFICATION; DNA BASE COMPOSITION; DNA SEQUENCE; ENVIRONMENTAL PROTECTION; GENETICS; GENOTYPE; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEIC ACID HYBRIDIZATION; PHYLOGENY; PHYSIOLOGY; RNA GENE; SPECIES DIFFERENCE;

BACTERIA (MICROORGANISMS); MARINOBACTER; MARINOBACTER BRYOZOORUM; NEGIBACTERIA;

BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; CONSERVATION OF NATURAL RESOURCES; DNA, BACTERIAL; FATTY ACIDS; FRESH WATER; GENES, RRNA; GENOTYPE; MARINOBACTER; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHENOTYPE; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SODIUM CHLORIDE; SPAIN; SPECIES SPECIFICITY; WETLANDS;

EID: 69449100857     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.007518-0     Document Type: Article

References (37)

1. Antunes, A., França, L., Rainey, F. A., Huber, R., Nobre, M. F., Edwards, K. J. & da Costa, M. S. (2007). Marinobacter salsuginis sp. nov., isolated from the brine-seawater interface of the Shaban Deep, Red Sea. Int J Syst Evol Microbiol 57, 1035-1040.
2. m de I'ADN bactérien. Ann Microbiol 127, 223- 235 (in French).
3. Gauthier, M. J., Lafay, B., Christen, R., Fernandez, L., Acquaviva, M., Bonin, P. & Bertrand, J. C. (1992). Marinobacter hydrocarbonoclasticus gen. nov., sp. nov., a new extremely halotolerant hydrocarbon-degrading marine bacterium. Int J Syst Bacteriol 42, 568-576.
4. Gorshkova, N. M., Ivanova, E. P., Sergeev, A. F., Zhukova, N. V., Alexeeva, Y., Wright, J. P., Nicolau, D. V., Mikhailov, V. V. & Christen, R. (2003). Marinobacter excellens sp. nov., isolated from sediments of the Sea of Japan. Int J Syst Evol Microbiol 53, 2073-2078.
5. Green, D. H., Bowman, J. P., Smith, E. A., Gutierrez, T. & Bolch, C. J. S. (2006). Marinobacter algicola sp. nov., isolated from laboratory cultures of paralytic shellfish toxin-producing dinoflagellates. Int J Syst Evol Microbiol 56, 523-527.
6. Gu, J., Cai, H., Yu, S.-L., Qu, R., Yin, B., Guo, Y.-F., Zhao, J.-Y. & Wu, X.-L. (2007). Marinobacter gudaonensis sp. nov., isolated from an oilpolluted saline soil in a Chinese oilfield. Int J Syst Evol Microbiol 57, 250-254.
7. Guo, B., Gu, J., Ye, Y.-G., Tang, Y.-Q., Kida, K. & Wu, X.-L. (2007). Marinobacter segnicrescens sp. nov., a moderate halophile isolated from benthic sediment of the South China Sea. Int J Syst Evol Microbiol 57, 1970-1974.
8. Huu, N. B., Denner, E. B.M., Dang, T. C. H., Wanner, G. & Stan-Lotter, H. (1999). Marinobacter aquaeolei sp. nov., a halophilic bacterium isolated from a Vietnamese oil-producing well. Int J Syst Bacteriol 49, 367-375.
9. Kharroub, K., Aguilera, M., Quesada, T., Morillo, J. M., Ramos-Cormenzana, A., Boulahrouf, A. & Monteoliva-Sanchez, M. (2006). Salicola salis sp. nov., an extremely halophilic bacterium isolated from Ezzemoul sabkha in Algeria. Int J Syst Evol Microbiol 56, 2647-2652.
10. Kim, B.-Y., Weon, H.-Y., Yoo, S.-H., Kim, J.-S., Kwon, S.-W., Stackebrandt, E. & Go, S.-J. (2006). Marinobacter koreensis sp. nov., isolated from sea sand in Korea. Int J Syst Evol Microbiol 56, 2653-2656.
11. Kumar, S., Tamura, K. & Nei, M. (2004). MEGA 3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
12. Kushner, D. J. & Kamekura, M. (1988). Physiology of halophilic eubacteria. In Halophilic Bacteria, vol. I, pp. 109-140. Edited by F. Rodríguez-Valera. Boca Raton, FL: CRC Press.
13. Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley.
14. Liebgott, P.-P., Casalot, L., Paillard, S., Lorquin, J. & Labat, M. (2006). Marinobacter vinifirmus sp. nov., a moderately halophilic bacterium isolated from a wine-barrel-decalcification wastewater. Int J Syst Evol Microbiol 56, 2511-2516.
15. Lind, E. & Ursing, J. (1986). Clinical strains of Enterobacter agglomerans (synonyms: Erwinia herbicola, Erwinia milletiae) identified by DNA-DNA hybridization. Acta Pathol Microbiol Immunol Scand [B] 94, 205-213.
16. Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
17. Márquez, M. C. & Ventosa, A. (2005). Marinobacter hydrocarbonoclasticus Gauthier et al. 1992 and Marinobacter aquaolei Nguyen et al. 1999 are heterotypic synonyms. Int J Syst Evol Microbiol 55, 1349-1351.
18. Martín, S., Marquez, M. C., Sánchez-Porro, C., Mellado, E., Arahal, D. R. & Ventosa, A. (2003). Marinobacter lipolyticus sp. nov., a novel moderate halophile with lipolytic activity. Int J Syst Evol Microbiol 53, 1383-1387.
19. Mata, J. A., Martínez-Cánovas, M. J., Quesada, E. & Bejar, V. (2002). A detailed phenotypic characterization of the type strains of Halomonas species. Syst Appl Microbiol 25, 360-375.
20. Montes, M. J., Bozal, N. & Mercadé, E. (2008). Marinobacter guineae sp. nov., a novel moderately halophilic bacterium from an Antarctic environment. Int J Syst Evol Microbiol 58, 1346-1349.
21. Owen, R. J. & Hill, L. R. (1979). The estimation of base compositions, base pairing and genome sizes of bacterial deoxyribonucleic acids. In Identification Methods for Microbiologists (Society for Applied Bacteriology Technical Series no. 14), 2nd edn, pp. 277-296. Edited by F. A. Skinner & D. W. Lovelock. London: Academic Press.
22. Prado, B., Del Moral, A., Quesada, E., Ríos, R., Monteoliva-Sanchez, M., Campos, V. & Ramos-Cormenzana, A. (1991). Numerical taxonomy of moderately halophilic Gram negative rods isolated from the Salar of Atacama, Chile. Syst Appl Microbiol 14, 275-281.
23. Prado, B., Lizama, C., Aguilera, M., Ramos-Cormenzana, A., Fuentes, S., Campos, V. & Monteoliva-Sánchez, M. (2006). Chromohalobacter nigrandesensis sp. nov., a moderately halophilic Gram-negative bacterium isolated from Lake Tebenquiche on the Atacama Saltern, Chile. Int J Syst Evol Microbiol 56, 647-651.
24. Quesada, E., Ventosa, A., Rodríguez-Valera, F., Megías, L. & Ramos-Cormenzana, A. (1983). Numerical taxonomy of moderately halophilic Gram-negative bacteria from hypersaline soils. J Gen Microbiol 129, 2649-2657.
25. Romanenko, L. A., Schumann, P., Rohde, M., Zhukova, N. V., Mikhailov, V. V. & Stackebrandt, E. (2005). Marinobacter bryozoorum sp. nov. and Marinobacter sediminum sp. nov., novel bacteria from the marine environment. Int J Syst Evol Microbiol 55, 143-148.
26. Saiki, R. K., Gelfand, D. H., Stoffel, S., Scharf, S. J., Higuchi, R., Horn, G. T., Mullis, K. B. & Erlich, H. A. (1988). Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 239, 487-491.
27. Shieh, W. Y., Jean, W. D., Lin, Y. T. & Tseng, M. (2003). Marinobacter lutaoensis sp. nov., a thermotolerant marine bacterium isolated from a coastal hot spring in Lutao, Taiwan. Can J Microbiol 49, 244-252.
28. Shivaji, S., Gupta, P., Chaturvedi, P., Suresh, K. & Delille, D. (2005). Marinobacter maritimus sp. nov., a psychrotolerant strain isolated from sea water off the subantarctic Kerguelen islands. Int J Syst Evol Microbiol 55, 1453-1456.
29. Subov, N. N. (1931). Oceanographical Tables. Moscow: USSR Oceanographic Institute Hydrometeorological Commission.
30. Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
31. Ventosa, A., Quesada, E., Rodriguez-Valera, F., Ruiz-Berraquero, F. & Ramos-Cormenzana, A. (1982). Numerical taxonomy of moderately halophilic Gram-negative rods. J Gen Microbiol 128, 1959-1968.
32. Xu, X.-W., Wu, Y.-H., Wang, C.-S., Yang, J.-Y., Oren, A. & Wu, M. (2008). Marinobacter pelagius sp. nov., a moderately halophilic bacterium. Int J Syst Evol Microbiol 58, 637-640.
33. Yoon, J.-H., Shin, D.-Y., Kim, I.-G., Kang, K. H. & Park, Y.-H. (2003). Marinobacter litoralis sp. nov., a moderately halophilic bacterium isolated from sea water from the East Sea in Korea. Int J Syst Evol Microbiol 53, 563-568.
34. Yoon, J.-H., Yeo, S.-H., Kim, I.-G. & Oh, T.-K. (2004). Marinobacter flavimaris sp. nov. and Marinobacter daepoensis sp. nov., slightly halophilic organisms isolated from sea water of the Yellow Sea in Korea. Int J Syst Evol Microbiol 54, 1799-1803.
35. Yoon, J.-H., Lee, M.-H., Kang, S.-J. & Oh, T.-K. (2007). Marinobacter salicampi sp. nov., isolated from a marine solar saltern in Korea. Int J Syst Evol Microbiol 57, 2102-2105.
36. Zhang, D.-C., Li, H.-R., Xin, Y.-H., Chi, Z.-M., Zhou, P.-J. & Yu, Y. (2008). Marinobacter psychrophilus sp. nov., a psychrophilic bacterium isolated from the Arctic. Int J Syst Evol Microbiol 58, 1463- 1466.
37. Ziemke, F., Höfle, M. G., Lalucat, J. & Rosselló-Mora, R. (1998). Reclassification of Shewanella putrefaciens Owen's genomic group II as Shewanella baltica sp. nov. Int J Syst Bacteriol 48, 179-186.