DNA characterization of simian Entamoeba histolytica-like strains to differentiate them from Entamoeba histolytica

Parasitology Research

Volumn 105, Issue 4, 2009, Pages 929-937

  Takano, Jun Ichiro ^a   Tachibana, Hiroshi ^b   Kato, Miyoko ^a   Narita, Toyoko ^a   Yanagi, Tetsuo ^c   Yasutomi, Yasuhiro ^d   Fujimoto, Koji ^a  

^a The Corporation for Production and Research of Laboratory Primates   (Japan)

^b TOKAI UNIVERSITY   (Japan)

^c NAGASAKI UNIVERSITY   (Japan)

^d NATIONAL INSTITUTE OF BIOMEDICAL INNOVATION   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CHAPERONIN; CHITINASE; DNA 18S; DNA 5S; GLUCOSE 6 PHOSPHATE ISOMERASE; HEXOKINASE; NICOTINAMIDE ADENINE DINUCLEOTIDE (PHOSPHATE) TRANSHYDROGENASE; PHOSPHOGLUCOMUTASE; PROTOZOAL DNA; SERINE;

ANIMAL EXPERIMENT; ANIMAL MODEL; ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; DNA SEQUENCE; ENTAMOEBA; ENTAMOEBA EHMFAS1; ENTAMOEBA HISTOLYTICA; ENTAMOEBA NUTTALLI; ENTAMOEBA P19 061405; GENETIC DIFFERENCE; HABITAT SELECTION; MOLECULAR EVOLUTION; MONKEY; NONHUMAN; NUCLEOTIDE SEQUENCE; PARASITE IDENTIFICATION; PHYLOGENY; PRIORITY JOURNAL; PROTOZOAL GENETICS; SPECIES DIFFERENCE; STRAIN DIFFERENCE;

ANIMALS; CLUSTER ANALYSIS; DNA, PROTOZOAN; DNA, RIBOSOMAL; ENTAMOEBA; ENTAMOEBIASIS; GENOTYPE; GLUCOSE-6-PHOSPHATE ISOMERASE; HAPLORHINI; HEXOKINASE; MOLECULAR SEQUENCE DATA; MONKEY DISEASES; PHOSPHOGLUCOMUTASE; PHYLOGENY; RNA, RIBOSOMAL, 18S; RNA, RIBOSOMAL, 5.8S; SEQUENCE ANALYSIS, DNA;

ENTAMOEBA; ENTAMOEBA HISTOLYTICA; SIMIAE;

EID: 69249215343     PISSN: 09320113     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00436-009-1480-3     Document Type: Article

References (36)

1. IKM Ali M Zaki CG Clark 2005 Use of PCR amplification of tRNA gene-linked short tandem repeats for genotyping Entamoeba histolytica J Clin Microbiol 43 5842 5847
2. PF Ayeh-Kumi IM Ali LA Lockhart CA Gilchrist WA Petri Jr.R Haque 2001 Entamoeba histolytica: genetic diversity of clinical isolates from Bangladesh as demonstrated by polymorphisms in the serine-rich gene Exp Parasitol 99 80 88
3. C Bakatselou D Beste AO Kadri S Somanath CG Clarc 2003 Analysis of genes of mitochondrial origin in the genus Entamoeba J Eukaryot Microbiol 50 210 214
4. D Bhattacharya R Haque U Singh 2005 Coding and noncoding genomic regions of Entamoeba histolytica have significantly different rates of sequence polymorphisms: implications for epidemiological studies J Clin Microbiol 43 4815 4819
5. A Castellani 1908 Note on a liver abscess of amoebic origin in a monkey Parasitology 1 101 102
6. CG Clark LS Diamond 1993 Entamoeba histolytica: a method for isolate identification Exp Parasitol 77 450 455
7. CG Clark LS Diamond 1997 Inraspecific variation and phylogenetic relationships in the genus Entamoeba as revealed by riboprinting J Euk Microbiol 44 142 154
8. CG Clark F Kaffashian B Tawari JJ Windsor A Twigg-Flesner MC Davies-Morel J Blessmann F Ebert B Peschel A Le Van CJ Jackson L Macfarlane E Tannich 2006 New insights into the phylogeny of Entamoeba species provided by analysis of four new small-subunit rRNA genes Int J Syst Evol Microbiol 56 2235 2239
9. LS Diamond DR Harlow CC Cunnick 1978 A new medium for the axenic cultivation of Entamoeba histolytica and other Entamoeba Trans R Soc Trop Med Hyg 72 431 432
10. H de la Vega CA Specht CE Semio PW Robbins D Eichinger D Caplivski S Ghosh J Samuelson 1997 Cloning and expression of chitinases of Entamoebae Mol Biochem Parasitol 85 139 147
11. G Dover 1982 Molecular drive: a cohesive mode of species evolution Nature 299 111 117
12. GA Dover 1993 Evolution of genetic redundancy for advanced players Curr Opin Genet Dev 3 902 910
13. GA Dover D Tautz 1986 Conservation and divergence in multigene families: alternatives to selection and drift Philos Trans R Soc Lond B Biol Sci 312 275 289
14. S Ghosh M Frisardi DS Ramirez-Avila K Sturm-Ramirez OA Newton Sanchez JI Sntos-Preciado C Ganguly A Lohia S Reed J Samuelson 2000 Molecular epidemiology of Entamoeba spp.: evidence of a bottleneck (Demographic Sweep) and transcontinental spread of diploid parasites J Clin Microbiol 38 3815 3821
15. A Haghighi S Kobayashi T Takeuchi G Masuda T Nozaki 2002 Remarkable genetic polymorphism among Entamoeba histolytica isolates from a limited geographic area J Clin Microbiol 40 4081 4090
16. A Haghighi S Kobayashi T Takeuchi N Thammapalerd T Nozaki 2003 Geographic diversity among genotypes of Entamoeba histolytica field isolates J Clin Microbiol 41 3748 3756
17. S Jinks-Robertson TD Petes 1993 Experimental determination of rates of concerted evolution Methods Enzymol 224 631 646
18. S Kohler E Tannich 1993 A family of transcripts (K2) of Entamoeba histolytica contains polymorphic repetitive regions with highly conserved elements Mol Biochem Parasitol 59 49 58
19. E Li C Kunz-Jenkins SL Stanley Jr.1992 Isolation and characterization of genomic clones encoding a serine-rich Entamoeba histolytica protein Mol Biochem Parasitol 50 355 358
20. D Liao 1999 Concerted evolution: molecular mechanism and biological implications Am J Hum Genet 64 24 30
21. N Saitou M Nei 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees Mol Biol Evol 4 406 425
22. JD Silberman CG Clark LS Diamond ML Sogin 1999 Phylogeny of the genera Entamoeba and Endolimax as deduced from small-subunit ribosomal RNA sequence Mol Biol Evol 16 1740 1751
23. I Som A Azam A Bhattacharya S Bhattacharya 2000 Inter- and intra-strain variation in the 5.8S ribosomal RNA and internal transcribed spacer sequences of Entamoeba histolytica and comparison with Entamoeba dispar, Entamoeba moshkovskii and Entamoeba invadens Int J Parasitol 30 723 728
24. SL Stanley Jr.A Becker C Kunz-Jenkins L Foster E Li 1990 Cloning and expression of a membrane antigen of Entamoeba histolytica possessing multiple tandem repeats Proc Natl Acad Sci U S A 87 4976 4980
25. SL Stanley Jr.K Tian JP Koester E Li 1995 The serine-rich Entamoeba histolytica protein is a phosphorylated membrane protein containing O-linked terminal N-acetylglucosamine residues J Biol Chem 270 4121 4126
26. J Suzuki S Kobayashi R Murata Y Yanagawa T Takeuchi 2007 Profiles of a pathogenic Entamoeba histolytica-like variant with variations in the nucleotide sequence of the small subunit ribosomal RNA isolated from a primate (De Brazza's guenon) J Zoo Wildl Med 38 471 474
27. H Tachibana S Kobayashi Y Kato K Nagakura Y Kaneda T Takeuchi 1990 Identification of a pathogenic isolate-specific 30, 000-Mr antigen of Entamoeba histolytica by using a monoclonal antibody Infect Immun 58 955 960
28. H Tachibana T Yanagi K Pandey XJ Cheng S Kobayashi JB Sherchand H Kanbara 2007 An Entamoeba sp. strain isolated from rhesus monkey is virulent but genetically different from Entamoeba histolytica Mol Biochem Parasitol 153 107 114
29. J Takano T Narita H Tachibana T Shimizu H Komatsubara K Terao K Fujimoto 2005 Entamoeba histolytica and Entamoeba dispar infections in cynomolgus monkeys imported into Japan for research Parasitol Res 97 255 257
30. J Takano T Narita H Tachibana K Terao K Fujimoto 2007 Comparison of Entamoeba histolytica DNA isolated from a cynomolgus monkey with human isolates Parasitol Res 101 539 546
31. B Tawari IK Ali C Scott MA Quail M Berriman N Hall CG Clark 2008 Patterns of evolution in the unique tRNA gene arrays of the genus Entamoeba Mol Biol Evol 25 187 198
32. JD Thompson TJ Gibson F Plewniak F Jeanmougin DG Higgins 1997 The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Research 25 4876 4882
33. JJ Verweij J Vermeer EAT Brienen C Blotkamp D Laeijendecker LV Lieshout AM Polderman 2003 Entamoeba histolytica infections in captive primates Parasitol Res 90 100 103
34. GS Wilkinson AM Chapman 1991 Length and sequence variation in evening bat D-loop mtDNA Genetics 128 607 617
35. M Zaki CG Clark 2001 Isolation and characterization of polymorphic DNA from Entamoeba histolytica J Clin Microbiol 39 897 905
36. M Zaki P Meelu W Sun CG Clark 2002 Simultaneous differentiation and typing of Entamoeba histolytica and Entamoeba dispar J Clin Microbiol 40 1271 1276