New karyotypic data for Asian rodents (Rodentia, Muridae) with the first report of B-chromosomes in the genus Mus

Journal of Zoology

Volumn 279, Issue 1, 2009, Pages 44-56

  Badenhorst, D ^a   Herbreteau, V ^b   Chaval, Y ^c   Pages M ^c   Robinson, T J ^a   Rerkamnuaychoke, W ^d   Morand, S ^e   Hugot, J P ^f   Dobigny, G ^c  

^a STELLENBOSCH UNIVERSITY   (South Africa)

^b UMR TETIS   (France)

^c CENTRE DE BIOLOGIE ET DE GESTION DES POPULATIONS   (France)

^d KASETSART UNIVERSITY   (Thailand)

^e INSTITUT DES SCIENCES DE L EVOLUTION   (France)

^f MUSÉUM NATIONAL D'HISTOIRE NATURELLE   (France)

Author keywords

Cytotaxonomy; Rattini; Sibling species; Systematics

Indexed keywords

CHROMOSOME; CYTOGENETICS; KARYOTYPE; PHYLOGENY; RELATEDNESS; RODENT; TAXONOMY;

BANDICOTA; BANDICOTA INDICA; BANDICOTA SAVILEI; BERYLMYS; BERYLMYS BERDMOREI; BERYLMYS BOWERSI; CHIROPODOMYS GLIROIDES; HAPALOMYS DELACOURI; LEOPOLDAMYS EDWARDSI; LEOPOLDAMYS NEILLI; MAXOMYS SURIFER; MENETES BERDMOREI; MURIDAE; MUS CAROLI; MUS CERVICOLOR; MUS COOKII; NIVIVENTER FULVESCENS; RATTUS; RATTUS EXULANS; RATTUS LOSEA; RATTUS TANEZUMI; RODENTIA; SCIURIDAE;

EID: 69249132561     PISSN: 09528369     EISSN: 14697998     Source Type: Journal    
DOI: 10.1111/j.1469-7998.2009.00588.x     Document Type: Article

References (67)

1. Abe, H. (1983). Variation and taxonomy of Niviventer fulvescens and notes on Niviventer group of rats in Thailand. J Mamm Soc Jpn 9, 151 161.
2. Aplin, K., Chesser, T. Ten Have, J. (2003a). Evolutionary biology of the genus Rattus: profile of an archetypal rodent pest. In Rats, mice and people: rodent biology and management : 487 498. Singleton, G.R., Hinds, L.A., Krebs, C.J. Spratt, DM (Eds). Australia : ACIAR Canberra.
3. Aplin, K.P., Brown, P.R., Jacob, J., Krebs, C.J. Singleton, G.R. (2003b). Field methods for rodent studies in Asia and the Indo-Pacific. ACIAR Monogr. 100, 1 233.
4. Auffray, J.C., Orth, A., Catalan, J., Gonzalez, J.P., Desmarais, E. Bonhomme, F. (2003). Phylogenetic position and description of a new species of subgenus Mus (Rodentia, Mammalia) from Thailand. Zool. Scr. 32, 119 127.
5. Avise, J.C. (2009). Phylogeography: retrospect and prospect. J. Biogeogr. 36, 3 15.
6. Avise, J.C. Robinson, T.J. (2008). Hemiplasy: a new term in the lexicon of phylogenetics. Syst. Biol. 57, 503 507.
7. Avirachan, T.T., Mehta, H.J. Sugandhi, M.R. (1971). Chromosomes of the genus Bandicota. Mamm. Chrom. Newsl. 12, 62 67.
8. Baskevich, M.I. Kuznetsov, G.V. (2000). Preliminary chromosomal results of Niviventer Marshall, 1976 (Mammalia, Rodentia, Muridae) from the Dalat plateau in Southern Vietnam. In Isolated vertebrate communities in the tropics. Proceedings of the 4th International Symposium Bonn Germany, Bonner Zoologische Monographien, 46 : 351 356. Rheinwald, G. (Eds).
9. Baskevich, M.I. Kuznetsov, G.V. (1998). Cytogenetic differentiation of species from the genus Rattus (Rodentia, Muridae) from the Dalat Plateau in southern Vietnam. Zool. Zh. 77, 1321 1328.
10. Camacho, J.P.M., Sharbel, T.F. Beukeboom, L.W. (2000). B-chromosome evolution. Philos. Trans. Roy. Soc. Lond. B 355, 163 178.
11. Corbet, G.B. Hill, J.E. (1992). Mammals of the Indomalayan region: a systematic review. London and Oxford, UK : Natural History Museum Publications and Oxford University Press.
12. Crandall, K.A., Bininda-Emonds, O.R.P., Mace, G.M. Wayne, R.K. (2000). Considering evolutionary processes in conservation biology. Trends Ecol. Evol. 115, 290 295.
13. Carleton, M.D. Musser, G.G. (2005). "Order Rodentia". In Mammal species of the world, 3rd edn : 745 752. Wilson, D.E. Reeder, D.M. (Eds). The Johns Hopkins University Press.
14. Dobigny, G., Granjon, L., Aniskin, V., Bâ, K. Volobouev, V. (2003). A new sibling species of Taterillus (Rodentia, Gerbillinae) from West Africa. Mammal Biol. 68, 299 316.
15. Duncan, J.F., Irsiana, R. Chang, A. (1974). Karyotypes of five taxa of Rattus (Rodentia, Muridae) from Indonesia. Cytologia 39, 295 302.
16. Duplantier, J.M., Britton-Davidian, J. Granjon, L. (1990). Chromosomal characterization of three species of the genus Mastomys in Senegal. Z. Zool. Syst. Evol. Forsch. 28, 289 298.
17. Duncan, J.F., van Peenen, P.F.D. Ryan, P.F. (1970). Somatic chromosomes of eight mammals from Con son Island, South Vietnam. Caryologia 23, 173 181.
18. Evans, E.P., Breckon, G. Ford, C.E. (1963). An air-drying method for meiotic preparations from mammalian testes. Cytogenetics 3, 289 294.
19. Gadi, I.K. Raman, R. (1977). Unusualchromosome polymorphism in the mole rat, Bandicota indica nemorivaga. First All India Cell Biology Conference, Varanasi. Abstract, pp, 20.
20. Gadi, I.K. Sharma, T. (1983). Cytogenetic relationships in Rattus, Cremnomys, Millardia, Nesokia and Bandicota. Genetica 61, 21 40.
21. Gadi, I.K., Sharma, T. Raman, R. (1982). Supernumerary chromosomes in Bandicota indica nemorivaga and a female individual with XX/X0 mosaicism. Genetica 58, 103 108.
22. Granjon, L. Dobigny, G. (2003). Chromosomally characterised murid rodents from the edges of Lake Chad: evidence for an African biogeographical crossroads, or a centre of endemism? Mammal Rev. 33, 77 91.
23. Hoffman, S.L., Subramanian, G.M., Collins, F.H. Venter, J.C. (2002). Plasmodium, human and Anopheles genomics and malaria. Nature 415, 702 709.
24. Lecompte, E., Brouat, C., Duplantier, J.M., Galan, G., Granjon, L., Loiseau, A., Mouline, K. Cosson, J.F. (2005). Molecular identification of four cryptic species of Mastomys (Rodentia, Murinae). Biochem. Syst. Ecol. 33, 681 689.
25. Lecompte, E., Aplin, K., Denys, C., Catzeflis, F., Chades, M. Chevret, P. (2008). Phylogeny and biogeography of African Murinae based on mitochondrial and nuclear gene sequences, with a new tribal classification of the subfamily. BMC Evol Biol 8, 199. doi :.
26. Lecompte, E., Fichet-Calvet, E., Daffis, S., Koulema, K., Sylla, O., Kourouma, F., Doré, A., Soropogui, B., Aniskin, V., Allali, B., Kouassi Kan, S., Lalis, A., Koivogui, L., Günther, Denys, C. ter Meulen, J. (2006). Mastomys natalensis and Lassa fever, West Africa. Emerg. Infect. Dis. 12, 178 183.
27. Lee, M.R. Elder, F.F.B. (1980). Yeast stimulation of bone marrow mitosis for cytogenetic investigations. Cytogenet. Cell Genet. 26, 36 40.
28. Markvong, A., Marshall, J. Gropp, A. (1973). Chromosomes of rats and mice of Thailand. Nat. Hist. Bull. Siam Soc. 25, 23 40.
29. Marshall, J.T. Jr. 1977). Family Muridae: rats and mice. In Mammals of Thailand : 396 487. Lekagul, B. McNeely, J.A. (Eds). Bangkok, Thailand : Association for the Conservation of Wildlife, Sahakarnbhat Co.
30. Michaux, J.R., Kinet, S., Filipucci, M.G., Libois, R., Besnard, A. Catzeflis, F. (2001). Molecular identification of three sympatric species of wood mice (Apodemus sylvaticus, A. flavicollis, A. alpicola) in Western Europe (Muridae, Rodentia). Mol. Ecol. Notes 1, 260 263.
31. Mills, J.N. Childs, J.E. (1998). Ecologic studies of rodent reservoirs: their relevance for human health. Emerg. Infect. Dis. 4, 529 537.
32. Moritz, C. (2002). Strategies to protect biological diversity and the evolutionary processes that sustain it. Syst. Biol. 51, 238 254.
33. Motokawa, M., Lu, K.H., Harada, M. Lin, L.K. (2001). New records of the Polynesian rat Rattus exulans (Mammalia: Rodentia) from Taiwan and the Ryukyus. Zool. Stud. 40, 299 304.
34. Musser, G.G. (1981). Notes on systematics of Indo-Malayan murid rodents, and descriptions of new genera and species from Ceylon, Sulawesi, and the Philippines. Bull. Am. Mus. Nat. Hist. 168, 225 334.
35. Musser, G.G. Newcomb, C. (1983). Malaysian murids and the giant rat of Sumatra. Bull. Am. Mus. Nat. Hist. 174, 327 598.
36. O'Brien, S.J., Meminger, J.C. Nash, W.G. (2006). Atlas of Mammalian chromosomes. John Wiley and Sons, Inc. Hoboken, Canada.
37. Ranjini, P.V. (1967). Studies on mammalian chromosomes Ph.D. thesis, Banaras Hindu University.
38. Rambau, R.V., Stanyon, R. Robinson, T.J. (2003). Molecular genetics of Rhabdomys pumilio subspecies boundaries: mtDNA phylogeography and karyotypic analysis by fluorescence in situ hybridization (FISH). Mol. Phylogenet. Evol. 28, 564 575.
39. Reynes, J.M., Soares, J.L., Hüe, T., Bouloy, M., Sun, S., Kruy, S.L., Flye Sainte Marie, F. Zeller, H. (2003). Evidence of the presence of Seoul virus in Cambodia. Microbes Infect. 5, 769 773.
40. Richard, F., Messaoudi, C., Bonnet-Garnier, A., Lombard, M. Dutrillaux, B. (2003). Highly conserved chromosomes in an Asian squirrel (Menetes berdmorei, Rodentia: Sciuridae) as demonstrated by ZOO-FISH with human probes. Chromosome Res. 11, 597 603.
41. Rickart, E.A. Musser, G.G. (1993). Philippine rodents: chromosomal characteristics and their significance for phylogenetic inference among 13 species (Rodentia, Muridae, Murinae). Am. Mus. Novit. 3064, 1 34.
42. Robins, J.H., McLenachan, P.A., Phillips, M.J., Craig, L., Ross, H.A. Matisoo-Smith, E. (2008). Dating of divergences within the Rattus genus phylogeny using whole mitochondrial genomes. Mol. Phylogenet. Evol. 49, 460 466.
43. Robinson, T.J., Ruiz-Herrera, A. Avise, J.C. (2008). Hemiplasy and homoplasy in the karyotypic phylogenies of mammals. Proc. Natl. Acad. Sci. USA 105, 14477 14481.
44. Seabright, M. (1971). A rapid banding technique for human chromosome. Lancet 2, 971 972.
45. Sites, J.W. Jr. Marshall, J.C. (2003). Delimiting species: a Renaissance issue in systematic biology. Trends Ecol. Evol. 18, 462 470.
46. Sumner, A.T. (1972). A simple technique for demonstrating centromeric heterochromatin. Exp. Cell Res. 75, 304 306.
47. Veyrunes, F., Catalan, J., Sicard, B., Robinson, T.J., Duplantier, J.M., Granjon, L., Dobigny, G. Britton-Davidian, J. (2004). Autosome and sex chromosome diversity among the African pygmy mice, subgenus Nannomys (Murinae; Mus). Chromosome Res. 12, 369 382.
48. Viegas-Péquignot, E., Petit, D., Benazzou, T., Prud'Homme, M., Lombard, M., Hoffschir, F., Des-Cailleaux, J. Dutrillaux, B. (1986). Phylogénie chromosomique chez les Sciuridés, Gerbillidés et Muridés, et études d'espèces appartenant à d'autres familles de rongeurs. Mammalia 50, 164 202.
49. Volobouev, V., Ducroz, J.F., Aniskin, V., Britton-Davidian, J., Castiglia, R., Dobigny, G., Granjon, L., Lombard, M., Sicard, B. Capanna, E. (2002). Chromosomal characterisation of Arvicanthis species (Rodentia: Murinae) from Western and Central Africa: implications on taxonomy. Cytogenet. Genome Res. 96, 250 260.
50. Vujošević, M. Blagojević, J. (2004). B chromosomes in populations of mammals. Cytogenet. Genome Res. 106, 247 256.
51. Wang, J.X., Zhao, X.F., Koh, H.S., Deng, Y. Qi, H.Y. (2003). Chromosomal polymorphisms due to heterochromatin growth and pericentric inversions in white-bellied rat, Niviventer confucianus, from China. Hereditas 138, 59 64.
52. Wilson, D.E. Reeder, D.A.M. (2005). Mammal species of the World: a taxonomic and geographic reference. Baltimore, USA : The John Hopkins University Press.
53. Yong, H.S. (1968). Karyotype of four Malayan rats (Muridae, genus Rattus Fischer). Cytologia 33, 174 180.
54. Yong, H.S. (1969). Karyotypes of Malayan rats (Rodentia, Muridae, genus Rattus Fischer). Chromosoma 27, 245 267.
55. Yong, H.S. (1970). A Malayan view of Rattus edwardsii and R. sabanus (Rodentia: Muridae). Zool. J. Linn. Soc. 49, 359 370.
56. Yong, H.S. (1973). Chromosomes of the pencil-tailed tree-mouse, Chiropodomys gliroides (Rodentia, Muridae). Malays. Nat. J. 26, 159 162.
57. Yong, H.S. (1983). Heterochromatin blocks in the karyotype of the pencil-tailed tree-mouse, Chiropodomys gliroides (Rodentia, Muridae). Experientia 39, 1039 1040.
58. Yong, H.S., Dhaliwal, S.S. Lim, L. (1982). Karyotypes of Hapalomys and Pithecheir (Rodentia, Muridae) from Peninsular Malaysia. Cytologia 47, 535 538.
59. Yosida, T.H. Sagai, T. (1973). Similarity of Giemsa banding patterns of chromosomes in several species of the genus Rattus. Chromosoma 41, 93 101.
60. Yosida, T.H. (1973). Evolution of karyotypes and differentiation in 13 Rattus species. Chromosoma 40, 285 297.
61. Yosida, T.H. (1977a). Frequencies of chromosome polymorphism in pairs no. 1, 9 and 13 in three geographical variants of black rats, Rattus rattus. Chromosoma 60, 391 398.
62. Yosida, T.H. (1976). Frequencies of chromosome polymorphism (pairs no. 1, 9 and 13) in the black rat, Rattus rattus diardii (Rodentia, Muridae). Chromosoma 36, 256 262.
63. Yosida, T.H. (1977b). Supernumerary chromosomes in the black rat (Rattus rattus) and their distribution in three geographic variants. Cytogenet. Cell Genet. 18, 149 159.
64. Yosida, T.H., Kato, H., Tsuchiya, K., Sagai, T. Moriwaki, K. (1974). Cytogenetical survey of black rats, Rattus rattus, in Southwest and Central Asia, with special regard to the evolutionary relationship between three geographical types. Chromosoma 45, 99 109.
65. Yosida, T.H. Sagai, T. (1975). Variation in C-bands in the chromosomes of several subspecies of Rattus rattus. Chromosoma 50, 283 300.
66. Yosida, T.H., Tsuchiya, K. Moriwaki, K. (1971a). Frequency of chromosome polymorphism in Rattus rattus collected in Japan. Chromosoma 33, 33 40.
67. Yosida, T.H., Tsuchiya, K. Moriwaki, K. (1971b). Karyotypic differences of black rats, Rattus rattus, collected in various localities of East and Southeast Asia and Oceania. Chromosoma 33, 252 267.