A biotin-based protein tagging system

Analytical Biochemistry

Volumn 393, Issue 2, 2009, Pages 189-195

  Sueda, Shinji ^a,b   Tanaka, Hitoshi ^a   Yamagishi, Masanori ^a  

^a KYUSHU INSTITUTE OF TECHNOLOGY   (Japan)

^b JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

Author keywords

Affinity purification; Biotin protein ligase; Biotinylation; Protein interaction; Protein tagging system

Indexed keywords

ACYLATION; AMINO ACIDS; DISSOCIATION; SURFACE PLASMON RESONANCE; THESAURI;

AFFINITY PURIFICATION; BIOTINYLATIONS; PROTEIN INTERACTION; PROTEIN LIGASE; PROTEIN TAGGING;

COENZYMES;

BACTERIAL PROTEIN; BIOTIN CARBOXYL CARRIER PROTEIN; BIOTIN PROTEIN LIGASE; GLUTATHIONE TRANSFERASE; GREEN FLUORESCENT PROTEIN; HYBRID PROTEIN; UNCLASSIFIED DRUG;

AMINO TERMINAL SEQUENCE; ARTICLE; BIOTINYLATION; CARBOXY TERMINAL SEQUENCE; CONTROLLED STUDY; DISSOCIATION CONSTANT; ENZYME BINDING; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN FUNCTION; PROTEIN INTERACTION; SULFOLOBUS; SURFACE PLASMON RESONANCE;

ARCHAEA; SULFOLOBUS TOKODAII;

EID: 68349152643     PISSN: 00032697     EISSN: 10960309     Source Type: Journal    
DOI: 10.1016/j.ab.2009.06.027     Document Type: Article

References (24)

1. Jarvik J.W., and Telmer C.A. Epitope tagging. Annu. Rev. Genet. 32 (1998) 601-618
2. Smith D.B., and Johnson K.S. Single-step purification of polypeptides expressed in Escherichia coli as fusions with glutathione S-transferase. Gene 67 (1988) 31-40
3. Boon K., Vijgenboom E., Madsen L.V., Talens A., Kraal B., and Bosch L. Isolation and functional analysis of histidine-tagged elongation factor Tu. Eur. J. Biochem. 210 (1992) 177-183
4. Kim J.-S., and Raines R.T. Ribonuclease S-peptide as a carrier in fusion proteins. Protein Sci. 2 (1993) 348-356
5. Keppler A., Gendreizig S., Gronemeyer T., Pick H., Vogel H., and Johnsson K. A general method for the covalent labeling of fusion proteins with small molecules in vivo. Nat. Biotechnol. 21 (2003) 86-89
6. Boer E.D., Rodriguez P., Bonte E., Krijgsveld J., Katsantoni E., Heck A., Grosveld F., and Strouboulis J. Efficient biotinylation and single-step purification of tagged transcription factors in mammalian cells and transgenic mice. Proc. Natl. Acad. Sci. USA 100 (2003) 7480-7485
7. Los G.V., and Wood K. The HaloTag: a novel technology for cell imaging and protein analysis. Methods Mol. Biol. 356 (2007) 195-208
8. Lue R.Y.P., Chen G.Y.J., Hu Y., Zhu Q., and Yao S.Q. Versatile protein biotinylation strategies for potential high-throughput proteomics. J. Am. Chem. Soc. 126 (2004) 1055-1062
9. Michnick S.W. Proteomics in living cells. Drug Discov. Today 9 (2004) 262-267
10. O'Hare H.M., Johnsson K., and Gautier A. Chemical probes shed light on protein function. Curr. Opin. Struct. Biol. 17 (2007) 488-494
11. Rigaut G., Shevchenko A., Rutz B., Wilm M., Mann M., and Séraphin B. A generic protein purification method for protein complex characterization and proteome exploration. Nat. Biotechnol. 17 (1999) 1030-1032
12. Kindermann M., George N., Johnsson N., and Johnsson K. Covalent and selective immobilization of fusion proteins. J. Am. Chem. Soc. 125 (2003) 7810-7811
13. Sielaff I., Arnold A., Godin G., Tugulu S., Klok H.A., and Johnsson K. Protein function microarrays based on self-immobilizing and self-labeling fusion proteins. ChemBioChem 7 (2006) 194-202
14. Li Y.-Q., Sueda S., Kondo H., and Kawarabayasi Y. A unique biotin carboxyl carrier protein in archaeon Sulfolobus tokodaii. FEBS Lett. 580 (2006) 1536-1540
15. Sueda S., Li Y.-Q., Kondo H., and Kawarabayasi Y. Substrate specificity of archaeon Sulfolobus tokodaii biotin protein ligase. Biochem. Biophys. Res. Commun. 344 (2006) 155-159
16. Chapman-Smith A., Turner D.L., Cronan Jr. J.E., Morris T.W., and Wallace J.C. Expression, biotinylation, and purification of a biotin-domain peptide from the biotin carboxy carrier protein of Escherichia coli acetyl-CoA carboxylase. Biochem. J. 302 (1994) 881-887
17. Choi-Rhee E., and Cronan J.E. The biotin carboxylase-biotin carboxyl carrier protein complex of Escherichia coli acetyl-CoA carboxylase. J. Biol. Chem. 278 (2003) 30806-30812
18. Jitrapakdee S., Maurice M.St., Rayment I., Cleland W.W., Wallace J.C., and Attwood P.V. Structure, mechanism, and regulation of pyruvate carboxylase. Biochem. J. 413 (2008) 369-387
19. Cronan Jr. J.E., and Reed K.E. Biotinylation of proteins in vivo: a useful posttranslational modification for protein analysis. Methods Enzymol. 326 (2000) 440-458
20. Karlsson R., and Fält A. Expression design for kinetic analysis of protein-protein interactions with surface plasmon resonance biosensors. J. Immunol. Methods 200 (1997) 121-133
21. Nordin H., Jungnelius M., Karlsson R., and Karlsson O.P. Kinetic studies of small molecule interactions with protein kinases using biosensor technology. Anal. Biochem. 340 (2005) 359-368
22. Lee Y.F., Lee H.J., and Chang C. Recent advances in the TR2 and TR4 orphan receptors of the nuclear receptor superfamily. J. Steroid Biochem. Mol. Biol. 81 (2002) 291-308
23. Chapman-Smith A., Morris T.W., Wallace J.C., and Cronan Jr. J.E. Molecular recognition in a post-translational modification of exceptional specificity: mutants of the biotinylated domain of acetyl-CoA carboxylase defective in recognition by biotin protein ligase. J. Biol. Chem. 274 (1999) 1449-1457
24. Gautier A., Juillerat A., Heinis C., Corrêa Jr. I.R., Kindermann M., Beaufils F., and Johnsson K. An engineered protein tag for multiprotein labeling in living cells. Chem. Biol. 15 (2008) 128-136