-
1
-
-
85032751035
-
'Control approaches for probabilistic gene regulatory networks'
-
10.1109/MSP.2007.273057 1053-5888
-
Datta, A., Pal, R., Choudhary, A., and Dougherty, E.R.: 'Control approaches for probabilistic gene regulatory networks', IEEE Signal Process. Mag., 2007, 24, (1), p. 54-63 10.1109/MSP.2007.273057 1053-5888
-
(2007)
IEEE Signal Process. Mag.
, vol.24
, Issue.1
, pp. 54-63
-
-
Datta, A.1
Pal, R.2
Choudhary, A.3
Dougherty, E.R.4
-
2
-
-
38949144494
-
'On approximate stochastic control in genetic regulatory networks'
-
Faryabi, B., Datta, A., and Dougherty, E.R.: 'On approximate stochastic control in genetic regulatory networks', IET Syst. Biol., 2007, 6, (1), p. 361-368
-
(2007)
IET Syst. Biol.
, vol.6
, Issue.1
, pp. 361-368
-
-
Faryabi, B.1
Datta, A.2
Dougherty, E.R.3
-
3
-
-
0032809387
-
'Gene expression profiling, genetic networks, and cellular states: An integrating concept for tumorigenesis and drug discovery'
-
Huang, S.: 'Gene expression profiling, genetic networks, and cellular states: An integrating concept for tumorigenesis and drug discovery', Mol. Med., 1999, 77, p. 469-480
-
(1999)
Mol. Med.
, vol.77
, pp. 469-480
-
-
Huang, S.1
-
4
-
-
0036184629
-
'Probabilistic Boolean networks: A rule-based uncertainty model for gene regulatory networks'
-
Shmulevich, I., Dougherty, R.E., Kim, S., and Zhang, W.: 'Probabilistic Boolean networks: A rule-based uncertainty model for gene regulatory networks', Bioinformatics, 2002, 18, p. 261-274
-
(2002)
Bioinformatics
, vol.18
, pp. 261-274
-
-
Shmulevich, I.1
Dougherty, R.E.2
Kim, S.3
Zhang, W.4
-
5
-
-
0003694798
-
The origins of order: Self-organization and selection in evolution'
-
(Oxford University Press, New York)
-
Kauffman, S.A.: She origins of order: self-organization and selection in evolution';, (Oxford University Press, New York 1993)
-
(1993)
-
-
Kauffman, S.A.1
-
6
-
-
0036772705
-
'Gene perturbation and intervention in probabilistic Boolean networks'
-
Shmulevich, I., Dougherty, E.R., and Zhang, W.: 'Gene perturbation and intervention in probabilistic Boolean networks', Bioinformatics, 2002, 18, (10), p. 1319-1331
-
(2002)
Bioinformatics
, vol.18
, Issue.10
, pp. 1319-1331
-
-
Shmulevich, I.1
Dougherty, E.R.2
Zhang, W.3
-
7
-
-
0347164904
-
'Control of stationary behavior in probabilistic Boolean networks by means of structural intervention'
-
Shmulevich, I., Dougherty, E.R., and Zhang, W.: 'Control of stationary behavior in probabilistic Boolean networks by means of structural intervention', Biol. Syst., 2002, 10, (2), p. 431-446
-
(2002)
Biol. Syst.
, vol.10
, Issue.2
, pp. 431-446
-
-
Shmulevich, I.1
Dougherty, E.R.2
Zhang, W.3
-
8
-
-
0038724486
-
'External control in markovian genetic regulatory networks'
-
10.1023/A:1023909812213 0885-6125
-
Datta, A., Choudhary, A., Bittner, M.L., and Dougherty, E.R.: 'External control in markovian genetic regulatory networks', Mach. Learn., 2003, 52, (1-2), p. 169-191 10.1023/A:1023909812213 0885-6125
-
(2003)
Mach. Learn.
, vol.52
, Issue.1-2
, pp. 169-191
-
-
Datta, A.1
Choudhary, A.2
Bittner, M.L.3
Dougherty, E.R.4
-
9
-
-
2342444140
-
'External control in markovian genetic regulatory networks: The imperfect information case'
-
Datta, A., Choudhary, A., Bittner, M.L., and Dougherty, E.R.: 'External control in markovian genetic regulatory networks: The imperfect information case', Bioinformatics, 2004, 20, (6), p. 924-930
-
(2004)
Bioinformatics
, vol.20
, Issue.6
, pp. 924-930
-
-
Datta, A.1
Choudhary, A.2
Bittner, M.L.3
Dougherty, E.R.4
-
10
-
-
62649160758
-
'Optimal finite-horizon control for probabilistic Boolean networks with hard constraints'
-
Ching, W.K., Zhang, S.Q., Jiao, Y., Akutsu, T., and Wong, A.S.: 'Optimal finite-horizon control for probabilistic Boolean networks with hard constraints', Int. Symp. Optimization and Systems Biology, 2007
-
(2007)
Int. Symp. Optimization and Systems Biology
-
-
Ching, W.K.1
Zhang, S.Q.2
Jiao, Y.3
Akutsu, T.4
Wong, A.S.5
-
11
-
-
16344368806
-
'Intervention in context-sensitive probabilistic Boolean networks'
-
Pal, R., Datta, A., Bittner, M.L., and Dougherty, E.R.: 'Intervention in context-sensitive probabilistic Boolean networks';, Bioinformatics, 2005, 21, (7), p. 1211-1218
-
(2005)
Bioinformatics
, vol.21
, Issue.7
, pp. 1211-1218
-
-
Pal, R.1
Datta, A.2
Bittner, M.L.3
Dougherty, E.R.4
-
12
-
-
33744466566
-
'Optimal infinite horizon control for probabilistic Boolean networks'
-
10.1109/TSP.2006.873740 1053-587X
-
Pal, R., Datta, A., and Dougherty, E.R.: 'Optimal infinite horizon control for probabilistic Boolean networks', IEEE Trans. Signal Process., 2006, 54, (6), p. 2375-2387 10.1109/TSP.2006.873740 1053-587X
-
(2006)
IEEE Trans. Signal Process.
, vol.54
, Issue.6
, pp. 2375-2387
-
-
Pal, R.1
Datta, A.2
Dougherty, E.R.3
-
13
-
-
4444335627
-
'Noise factor analysis for cDNA microarrays'
-
1083-3668
-
Balagurunathan, Y., Wang, N., and Dougherty, E.R.: Et al. 'Noise factor analysis for cDNA microarrays', J. Biomed. Opt., 2004, 4, (9), p. 663-678 1083-3668
-
(2004)
J. Biomed. Opt.
, vol.4
, Issue.9
, pp. 663-678
-
-
Balagurunathan, Y.1
Wang, N.2
Dougherty, E.R.3
-
14
-
-
33645379893
-
'Molecular systems biology and control'
-
0947-3580
-
Sontag, E.D.: 'Molecular systems biology and control', Eur. J. Control, 2005, 11, p. 396-435 0947-3580
-
(2005)
Eur. J. Control
, vol.11
, pp. 396-435
-
-
Sontag, E.D.1
-
15
-
-
0032187370
-
'New finitedimensional risk-sensitive filters: Small-noise limits'
-
0018-9286
-
Charalambous, C.D., Dey, S., and Elliot, R.J.: 'New finitedimensional risk-sensitive filters: Small-noise limits', IEEE Trans. Autom. Control, 1998, 43, (10), p. 1424-1429 0018-9286
-
(1998)
IEEE Trans. Autom. Control
, vol.43
, Issue.10
, pp. 1424-1429
-
-
Charalambous, C.D.1
Dey, S.2
Elliot, R.J.3
-
16
-
-
0031199655
-
'The role of information state and adjoint in relating nonlinear output feedback risk-sensitive control and dynamic games'
-
10.1109/9.618249 0018-9286
-
Charalambous, C.D.: 'The role of information state and adjoint in relating nonlinear output feedback risk-sensitive control and dynamic games';, IEEE Trans. Autom. Control, 1997, 42, (8), p. 1163-1170 10.1109/ 9.618249 0018-9286
-
(1997)
IEEE Trans. Autom. Control
, vol.42
, Issue.8
, pp. 1163-1170
-
-
Charalambous, C.D.1
-
17
-
-
40749162731
-
'Robust intervention in probabilistic Boolean networks'
-
10.1109/TSP.2007.908964 1053-587X 1280-1294 10.1109/TSP.2007.908964 1053-587X
-
Pal, R., Datta, A., and Dougherty, E.R.: 'Robust intervention in probabilistic Boolean networks';, IEEE Trans. Signal Process, 2008, 56, (3), p. 1280-1294 10.1109/TSP.2007.908964 1053-587X 1280-1294 10.1109/ TSP.2007.908964 1053-587X
-
(2008)
IEEE Trans. Signal Process
, vol.56
, Issue.3
, pp. 1280-1294
-
-
Pal, R.1
Datta, A.2
Dougherty, E.R.3
-
18
-
-
0003459126
-
'Hidden Markov models: Estimation and control'
-
(Springer-Verlang, Berlin, Germany)
-
Elliott, R.J., Aggoun, L., and Moore, J.B.: 'Hidden Markov models: estimation and control', (Springer-Verlang, Berlin, Germany 1995)
-
(1995)
-
-
Elliott, R.J.1
Aggoun, L.2
Moore, J.B.3
-
19
-
-
0031257250
-
'Risk-sensitive optimal control of hidden Markov models: Structural results'
-
10.1109/9.633830 0018-9286
-
Ferńandez-Gaucherand, E., and Marcus, S.I.: 'Risk-sensitive optimal control of hidden Markov models: Structural results', IEEE Trans. Autom. Control, 1997, 42, (10), p. 1418-1422 10.1109/9.633830 0018-9286
-
(1997)
IEEE Trans. Autom. Control
, vol.42
, Issue.10
, pp. 1418-1422
-
-
Ferńandez-Gaucherand, E.1
Marcus, S.I.2
-
20
-
-
68349138037
-
'Robustness and risk-sensitive filtering'
-
0018-9286
-
Boel, R.K., James, M.R., and Petersen, I.R.: 'Robustness and risk-sensitive filtering', IEEE Trans. Autom. Control, 1998, 43, (10), p. 1424-1429 0018-9286
-
(1998)
IEEE Trans. Autom. Control
, vol.43
, Issue.10
, pp. 1424-1429
-
-
Boel, R.K.1
James, M.R.2
Petersen, I.R.3
-
21
-
-
0034601455
-
'Molecular classification of cutaneous malignant melanoma by gene expression profiling'
-
0028-0836
-
Bittner, M., Meltzer, P., and Chen, Y.: Et al. 'Molecular classification of cutaneous malignant melanoma by gene expression profiling';, Nature, 2000, 406, (6795), p. 536-540 0028-0836
-
(2000)
Nature
, vol.406
, Issue.6795
, pp. 536-540
-
-
Bittner, M.1
Meltzer, P.2
Chen, Y.3
-
22
-
-
18844380444
-
'Robustness and fragility of Boolean models for genetic regulatory networks'
-
Chavez, M., Albert, R., and Sontag, E.D.: 'Robustness and fragility of Boolean models for genetic regulatory networks', J. Theor. Biol., 2005, 235, p. 431-449
-
(2005)
J. Theor. Biol.
, vol.235
, pp. 431-449
-
-
Chavez, M.1
Albert, R.2
Sontag, E.D.3
-
23
-
-
34247200371
-
'Stochastic uncertain systems subject to relative entropy constraints: Induced norms and monotonicity properties of minimax games'
-
10.1109/TAC.2007.894517 0018-9286
-
Charalambous, C.D., and Rezaei, F.: 'Stochastic uncertain systems subject to relative entropy constraints: Induced norms and monotonicity properties of minimax games';, IEEE Trans. Autom. Control, 2007, 52, (4), p. 647-663 10.1109/TAC.2007.894517 0018-9286
-
(2007)
IEEE Trans. Autom. Control
, vol.52
, Issue.4
, pp. 647-663
-
-
Charalambous, C.D.1
Rezaei, F.2
-
24
-
-
0036528247
-
'Wnt5a signaling directly affects cell motility and invasion of metastatic melanoma'
-
Weeraratna, A.T., Jiang, Y., Hostetter, G., Rosenblatt, K., Duray, P., Bittner, M., and Trent, J.M.: 'Wnt5a signaling directly affects cell motility and invasion of metastatic melanoma';, Cancer Cell, 2002, 1, p. 279-288
-
(2002)
Cancer Cell
, vol.1
, pp. 279-288
-
-
Weeraratna, A.T.1
Jiang, Y.2
Hostetter, G.3
Rosenblatt, K.4
Duray, P.5
Bittner, M.6
Trent, J.M.7
-
25
-
-
0037551723
-
'Can Markov chain models mimic biological regulation'
-
Kim, S., Li, H., and Dougherty, E.R.: Et al. 'Can Markov chain models mimic biological regulation', J. Biol. Syst., 2002, 10, (4), p. 337-357
-
(2002)
J. Biol. Syst.
, vol.10
, Issue.4
, pp. 337-357
-
-
Kim, S.1
Li, H.2
Dougherty, E.R.3
-
26
-
-
27744569877
-
'Generating Boolean networks with a prescribed attractor structure'
-
Pal, R., Ivanov, I., Datta, A., Bittner, M.L., and Dougherty, E.R.: 'Generating Boolean networks with a prescribed attractor structure';, Bioinformatics, 2005, 21, p. 4021-4025
-
(2005)
Bioinformatics
, vol.21
, pp. 4021-4025
-
-
Pal, R.1
Ivanov, I.2
Datta, A.3
Bittner, M.L.4
Dougherty, E.R.5
|