-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., and Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25 (1997) 3389-3402
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
33846798152
-
The evolution of the genetic code took place in an anaerobic environment
-
Archetti M., and Di Giulio M. The evolution of the genetic code took place in an anaerobic environment. J. Theor. Biol. 245 (2007) 169-174
-
(2007)
J. Theor. Biol.
, vol.245
, pp. 169-174
-
-
Archetti, M.1
Di Giulio, M.2
-
3
-
-
20144364162
-
Higher-level classification of the Archaea: evolution of methanogenesis and methanogens
-
Bapteste E., Brochier C., and Boucher Y. Higher-level classification of the Archaea: evolution of methanogenesis and methanogens. Archaea 1 (2005) 353-363
-
(2005)
Archaea
, vol.1
, pp. 353-363
-
-
Bapteste, E.1
Brochier, C.2
Boucher, Y.3
-
4
-
-
10644230266
-
A genomic timescale of prokaryote evolution: insights into the origin of methanogenesis, phototrophy, and the colonization of land
-
Battistuzzi F.U., Feljao A., and Hedges S.B. A genomic timescale of prokaryote evolution: insights into the origin of methanogenesis, phototrophy, and the colonization of land. BMC Evol. Biol. 4 (2004) 44
-
(2004)
BMC Evol. Biol.
, vol.4
, pp. 44
-
-
Battistuzzi, F.U.1
Feljao, A.2
Hedges, S.B.3
-
6
-
-
57749185463
-
Parallel adaptations to high temperature in the Archaean eon
-
Boussau B., Blanquart S., Necsulea A., Lartillot N., and Gouy M. Parallel adaptations to high temperature in the Archaean eon. Nature 456 (2008) 942-945
-
(2008)
Nature
, vol.456
, pp. 942-945
-
-
Boussau, B.1
Blanquart, S.2
Necsulea, A.3
Lartillot, N.4
Gouy, M.5
-
7
-
-
0033551919
-
Archean molecular fossils and the early rise of eukaryotes
-
Brocks J.J., Logan G.A., Buick R., and Summons R.E. Archean molecular fossils and the early rise of eukaryotes. Science 285 (1999) 1033-1036
-
(1999)
Science
, vol.285
, pp. 1033-1036
-
-
Brocks, J.J.1
Logan, G.A.2
Buick, R.3
Summons, R.E.4
-
8
-
-
0034736518
-
The late stage of genetic code structuring took place at a high temperature
-
Di Giulio M. The late stage of genetic code structuring took place at a high temperature. Gene 261 (2000) 189-195
-
(2000)
Gene
, vol.261
, pp. 189-195
-
-
Di Giulio, M.1
-
9
-
-
0034615794
-
The universal ancestor lived in a thermophilic or hyperthermophilic environment
-
Di Giulio M. The universal ancestor lived in a thermophilic or hyperthermophilic environment. J. Theor. Biol. 203 (2000) 203-213
-
(2000)
J. Theor. Biol.
, vol.203
, pp. 203-213
-
-
Di Giulio, M.1
-
10
-
-
0035960881
-
The universal ancestor was a thermophile or a hyperthermophile
-
Di Giulio M. The universal ancestor was a thermophile or a hyperthermophile. Gene 281 (2001) 11-17
-
(2001)
Gene
, vol.281
, pp. 11-17
-
-
Di Giulio, M.1
-
11
-
-
0037424668
-
The universal ancestor was a thermophile or a hyperthermophile: tests and further evidence
-
Di Giulio M. The universal ancestor was a thermophile or a hyperthermophile: tests and further evidence. J. Theor. Biol. 221 (2003) 425-436
-
(2003)
J. Theor. Biol.
, vol.221
, pp. 425-436
-
-
Di Giulio, M.1
-
12
-
-
0346104820
-
The universal ancestor and the ancestor of Bacteria were hyperthermophiles
-
Di Giulio M. The universal ancestor and the ancestor of Bacteria were hyperthermophiles. J. Mol. Evol. 57 (2003) 721-730
-
(2003)
J. Mol. Evol.
, vol.57
, pp. 721-730
-
-
Di Giulio, M.1
-
13
-
-
14744303570
-
A comparison of protein from Pyrococcus furiosus and Pyrococcus abyssi: bariphily in the physicochemical properties of amino acids and in the genetic code
-
Di Giulio M. A comparison of protein from Pyrococcus furiosus and Pyrococcus abyssi: bariphily in the physicochemical properties of amino acids and in the genetic code. Gene 346 (2005) 1-6
-
(2005)
Gene
, vol.346
, pp. 1-6
-
-
Di Giulio, M.1
-
14
-
-
14744290820
-
The ocean abysses witnessed the origin of the genetic code
-
Di Giulio M. The ocean abysses witnessed the origin of the genetic code. Gene 346 (2005) 7-12
-
(2005)
Gene
, vol.346
, pp. 7-12
-
-
Di Giulio, M.1
-
15
-
-
26044472882
-
Structuring of the genetic code took place at acidic pH
-
Di Giulio M. Structuring of the genetic code took place at acidic pH. J. Theor. Biol. 237 (2005) 219-226
-
(2005)
J. Theor. Biol.
, vol.237
, pp. 219-226
-
-
Di Giulio, M.1
-
16
-
-
0033534584
-
A nonhyperthermophilic common ancestor to extant life forms
-
Galtier N., Tourasse N., and Gouy M. A nonhyperthermophilic common ancestor to extant life forms. Science 283 (1999) 981-987
-
(1999)
Science
, vol.283
, pp. 981-987
-
-
Galtier, N.1
Tourasse, N.2
Gouy, M.3
-
17
-
-
0033616712
-
Thermal adaptation analyzed by comparison of proteins sequences from mesophilic and extremely thermophilic Methanococcus species
-
Haney P.J., Badger J.H., Buldak G.L., Reich C.I., Woese C.R., and Olsen G.J. Thermal adaptation analyzed by comparison of proteins sequences from mesophilic and extremely thermophilic Methanococcus species. Proc. Natl. Acad. Sci. USA 96 (1999) 3578-3583
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 3578-3583
-
-
Haney, P.J.1
Badger, J.H.2
Buldak, G.L.3
Reich, C.I.4
Woese, C.R.5
Olsen, G.J.6
-
18
-
-
38549173745
-
Presence of tRNA-dependent pathways correlates with high cysteine content in methanogenic Archaea
-
Klipcan L., Frenkel-Morgenstern M., and Safro M.G. Presence of tRNA-dependent pathways correlates with high cysteine content in methanogenic Archaea. Trends Genet. 24 (2008) 59-63
-
(2008)
Trends Genet.
, vol.24
, pp. 59-63
-
-
Klipcan, L.1
Frenkel-Morgenstern, M.2
Safro, M.G.3
-
19
-
-
0032737311
-
Patterns of temperature adaptation in proteins from Methanococcus and Bacillus
-
McDonald J.H., Grasso A.M., and Rejto L.K. Patterns of temperature adaptation in proteins from Methanococcus and Bacillus. Mol. Biol. Evol. 16 (1999) 1785-1790
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1785-1790
-
-
McDonald, J.H.1
Grasso, A.M.2
Rejto, L.K.3
-
20
-
-
0031574072
-
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., and Higgins D.G. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25 (1997) 4876-4882
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
21
-
-
33645309348
-
Evidence from fluid inclusions for microbial methanogenesis in the early Archaean era
-
Ueno Y., Yamada K., Yoshida S., Maruyama S., and Isozaki Y. Evidence from fluid inclusions for microbial methanogenesis in the early Archaean era. Nature 440 (2006) 516-519
-
(2006)
Nature
, vol.440
, pp. 516-519
-
-
Ueno, Y.1
Yamada, K.2
Yoshida, S.3
Maruyama, S.4
Isozaki, Y.5
-
22
-
-
34748862349
-
Polyphasic evidence delineating the root of life and roots of biological domains
-
Wong J.T., Chen J., Mat W.K., and Xue H. Polyphasic evidence delineating the root of life and roots of biological domains. Gene 403 (2007) 39-52
-
(2007)
Gene
, vol.403
, pp. 39-52
-
-
Wong, J.T.1
Chen, J.2
Mat, W.K.3
Xue, H.4
-
23
-
-
26844542163
-
Congruence of evidence for Methanopyrus-proximal root based on transfer RNA and aminoacyl-tRNA synthetase genes
-
Xue H., Ng S.K., Tong K.L., and Wong J.T. Congruence of evidence for Methanopyrus-proximal root based on transfer RNA and aminoacyl-tRNA synthetase genes. Gene 360 (2005) 120-130
-
(2005)
Gene
, vol.360
, pp. 120-130
-
-
Xue, H.1
Ng, S.K.2
Tong, K.L.3
Wong, J.T.4
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