-
1
-
-
0020469973
-
Making ends meet: A model for RNA splicing in fungal mitochondria
-
Davies,R.W., Waring,R.B., Ray,J.A., Brown,T.A. and Scazzochio,C. (1982) Making ends meet: A model for RNA splicing in fungal mitochondria. Nature, 300, 719-724.
-
(1982)
Nature
, vol.300
, pp. 719-724
-
-
Davies, R.W.1
Waring, R.B.2
Ray, J.A.3
Brown, T.A.4
Scazzochio, C.5
-
2
-
-
0024214064
-
Conserved sequences and structures of group I introns: Building an active site for RNA catalysis - a review
-
Cech,T.R. (1988) Conserved sequences and structures of group I introns: building an active site for RNA catalysis - a review. Gene, 73 259-271.
-
(1988)
Gene
, vol.73
, pp. 259-271
-
-
Cech, T.R.1
-
3
-
-
0023056271
-
One binding site determines sequence specificity of Tetrahymena pre-rRNA self-splicing, trans-splicing, and RNA enzyme activity
-
Been,M.D. and Cech,T.R. (1986) One binding site determines sequence specificity of Tetrahymena pre-rRNA self-splicing, trans-splicing, and RNA enzyme activity. Cell, 47, 207-216.
-
(1986)
Cell
, vol.47
, pp. 207-216
-
-
Been, M.D.1
Cech, T.R.2
-
4
-
-
0025678737
-
Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis
-
Michel,F. and Westhof,E. (1990) Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis. J. Mol. Biol., 216, 585-610.
-
(1990)
J. Mol. Biol
, vol.216
, pp. 585-610
-
-
Michel, F.1
Westhof, E.2
-
5
-
-
0026599998
-
Self-splicing introns in tRNA genes of widely divergent bacteria
-
Reinhold-Hurek,B. and Shub,D.A. (1992) Self-splicing introns in tRNA genes of widely divergent bacteria. Nature, 357, 173-176.
-
(1992)
Nature
, vol.357
, pp. 173-176
-
-
Reinhold-Hurek, B.1
Shub, D.A.2
-
6
-
-
0029805902
-
Ile of the purple bacterium Azoarcus
-
Ile of the purple bacterium Azoarcus. RNA, 2, 74-83.
-
(1996)
RNA
, vol.2
, pp. 74-83
-
-
Tanner, M.A.1
Cech, T.R.2
-
7
-
-
0032732707
-
Characterization of the Azoarcus ribozyme: Tight binding to guanosine and substrate by an unusually small group I ribozyme
-
Kuo,L.Y., Davidson,L.A. and Pico,S. (1999) Characterization of the Azoarcus ribozyme: Tight binding to guanosine and substrate by an unusually small group I ribozyme. Biochim. Biophys. Acta., 1489 281-292.
-
(1999)
Biochim. Biophys. Acta
, vol.1489
, pp. 281-292
-
-
Kuo, L.Y.1
Davidson, L.A.2
Pico, S.3
-
8
-
-
0007972388
-
RNA structure, not sequence, determines the 50 splice-site specificity of a group I intron
-
Doudna,J.A., Cormack,B.P. and Szostak,J.W. (1989) RNA structure, not sequence, determines the 50 splice-site specificity of a group I intron. Proc. Natl Acad. Sci. USA, 86, 7402-7406.
-
(1989)
Proc. Natl Acad. Sci. USA
, vol.86
, pp. 7402-7406
-
-
Doudna, J.A.1
Cormack, B.P.2
Szostak, J.W.3
-
9
-
-
0025300631
-
Minimum secondary structure requirements for catalytic activity of a self-splicing group I intron
-
Beaudry,A.A. and Joyce,G.F. (1990) Minimum secondary structure requirements for catalytic activity of a self-splicing group I intron. Biochemistry, 29, 6534-6539.
-
(1990)
Biochemistry
, vol.29
, pp. 6534-6539
-
-
Beaudry, A.A.1
Joyce, G.F.2
-
10
-
-
0026017131
-
Reconstitution of a group I intron self-splicing reaction with an activator RNA
-
van der Horst,G., Christian,A. and Inoue,T. (1991) Reconstitution of a group I intron self-splicing reaction with an activator RNA. Proc. Natl Acad. Sci. USA, 88, 184-188.
-
(1991)
Proc. Natl Acad. Sci. USA
, vol.88
, pp. 184-188
-
-
van der Horst, G.1
Christian, A.2
Inoue, T.3
-
11
-
-
0025869745
-
A multisubunit ribozyme that is a catalyst of and template for complementary strand RNA synthesis
-
Doudna,J.A., Couture,S. and Szostak,J.W. (1991) A multisubunit ribozyme that is a catalyst of and template for complementary strand RNA synthesis. Science, 251, 1605-1608.
-
(1991)
Science
, vol.251
, pp. 1605-1608
-
-
Doudna, J.A.1
Couture, S.2
Szostak, J.W.3
-
12
-
-
0029258956
-
Self-assembly of a group I intron active site from its component tertiary structural domains
-
Doudna,J. and Cech,T.R. (1995) Self-assembly of a group I intron active site from its component tertiary structural domains. RNA, 1, 36-45.
-
(1995)
RNA
, vol.1
, pp. 36-45
-
-
Doudna, J.1
Cech, T.R.2
-
13
-
-
0028911157
-
Novel system for analysis of group I 3′ splice site reactions based on functional trans-interaction of the P1/Pl0 reaction helix with the ribozyme's catalytic core
-
Chowrira,B.M., Berzal-Herranz,A. and Burke,J.M. (1995) Novel system for analysis of group I 3′ splice site reactions based on functional trans-interaction of the P1/Pl0 reaction helix with the ribozyme's catalytic core. Nucleic Acids Res., 23, 849-855.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 849-855
-
-
Chowrira, B.M.1
Berzal-Herranz, A.2
Burke, J.M.3
-
14
-
-
0031951385
-
Experimental evolution of complexity: In vitro emergence of intermolecular ribozyme interactions
-
Hanczyc,M. and Dorit,R.L. (1998) Experimental evolution of complexity: in vitro emergence of intermolecular ribozyme interactions. RNA, 4, 268-275.
-
(1998)
RNA
, vol.4
, pp. 268-275
-
-
Hanczyc, M.1
Dorit, R.L.2
-
15
-
-
0033118274
-
Trans-activation of the Tetrahymena group I intron ribozyme via a non-native RNA-RNA interaction
-
Ikawa,Y., Shiraishi,H. and Inoue,T. (1999) Trans-activation of the Tetrahymena group I intron ribozyme via a non-native RNA-RNA interaction. Nucleic Acids Res., 27, 1650-1655.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 1650-1655
-
-
Ikawa, Y.1
Shiraishi, H.2
Inoue, T.3
-
16
-
-
0033756223
-
Minimal catalytic domain of a group I self-splicing intron RNA
-
Ikawa,Y., Shiraishi,H. and Inoue,T. (2000) Minimal catalytic domain of a group I self-splicing intron RNA. Nature Struct. Biol., 7, 1032-1035.
-
(2000)
Nature Struct. Biol
, vol.7
, pp. 1032-1035
-
-
Ikawa, Y.1
Shiraishi, H.2
Inoue, T.3
-
17
-
-
0027406037
-
Requirements of a group I intron for reactions at the 3′ splice site
-
van der Horst,G. and Inoue,T. (1993) Requirements of a group I intron for reactions at the 3′ splice site. J. Mol. Biol., 229, 685-694.
-
(1993)
J. Mol. Biol
, vol.229
, pp. 685-694
-
-
van der Horst, G.1
Inoue, T.2
-
18
-
-
0034283819
-
Structure-function relationships of two closely related group IC3 intron ribozymes from Azoarcus and Synechococcus pre-tRNA
-
Ikawa,Y., Naito,D., Shiraishi,H. and Inoue,T. (2000) Structure-function relationships of two closely related group IC3 intron ribozymes from Azoarcus and Synechococcus pre-tRNA. Nucleic Acids Res., 28, 3269-3277.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 3269-3277
-
-
Ikawa, Y.1
Naito, D.2
Shiraishi, H.3
Inoue, T.4
-
19
-
-
64249122566
-
A simple method for gel-purification of radiolabeled nucleic acids via phosphorimaging: "Dip-N-Dot
-
doi:10.1016/j.ab.2009.02.010
-
Burton,A.S., Madix,R.A., Vaidya,N., Riley,C.A., Hayden,E.J., Chepetan,A., Díaz Arenas,C., Larson,B.C. and Lehman,N. (2009). A simple method for gel-purification of radiolabeled nucleic acids via phosphorimaging: "Dip-N-Dot". Anal. Biochem., 388, 351-352. doi:10.1016/j.ab.2009.02.010.
-
(2009)
Anal. Biochem
, vol.388
, pp. 351-352
-
-
Burton, A.S.1
Madix, R.A.2
Vaidya, N.3
Riley, C.A.4
Hayden, E.J.5
Chepetan, A.6
Díaz Arenas, C.7
Larson, B.C.8
Lehman, N.9
-
20
-
-
0029963656
-
A simple method for 3′-labeling of RNA
-
Huang,Z. and Szostak,J.W. (1996) A simple method for 3′-labeling of RNA. Nucleic Acids Res., 24, 4360-4361.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 4360-4361
-
-
Huang, Z.1
Szostak, J.W.2
-
21
-
-
33747378836
-
Self-assembly of a group I intron from inactive oligonucleotide fragments
-
Hayden,E.J. and Lehman,N. (2006) Self-assembly of a group I intron from inactive oligonucleotide fragments. Chem. Biol., 13, 909-918.
-
(2006)
Chem. Biol
, vol.13
, pp. 909-918
-
-
Hayden, E.J.1
Lehman, N.2
-
22
-
-
39149143346
-
Mechanisms of covalent self-assembly of the Azoarcus ribozyme from four fragment oligonucleotides
-
Draper,W.E., Hayden,E.J. and Lehman,N. (2008) Mechanisms of covalent self-assembly of the Azoarcus ribozyme from four fragment oligonucleotides. Nucleic Acids Res., 36, 520-531.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 520-531
-
-
Draper, W.E.1
Hayden, E.J.2
Lehman, N.3
-
23
-
-
54249138520
-
Systems chemistry on ribozyme self-construction: Evidence for anabolic autocatalysis in a recombination network
-
Hayden,E.J., von Kiedrowski,G. and Lehman,N. (2008) Systems chemistry on ribozyme self-construction: Evidence for anabolic autocatalysis in a recombination network. Angew. Chem. Int. Ed., 47, 8424-8428.
-
(2008)
Angew. Chem. Int. Ed
, vol.47
, pp. 8424-8428
-
-
Hayden, E.J.1
von Kiedrowski, G.2
Lehman, N.3
-
24
-
-
3042848954
-
Crystal structure of a self-splicing group I intron with both exons
-
Adams,P.L., Stahley,M.R., Kosek,A.B., Wang,J. and Strobel,S.A. (2004) Crystal structure of a self-splicing group I intron with both exons. Nature, 430, 45-50.
-
(2004)
Nature
, vol.430
, pp. 45-50
-
-
Adams, P.L.1
Stahley, M.R.2
Kosek, A.B.3
Wang, J.4
Strobel, S.A.5
-
25
-
-
0037452797
-
Assembly of core helicies and rapid tertiary folding of a small bacterial group I ribozyme
-
Rangan,P., Masquida,B., Westhof,E. and Woodson,S.A. (2003) Assembly of core helicies and rapid tertiary folding of a small bacterial group I ribozyme. Proc. Natl Acad. Sci. USA, 100, 1574-1579.
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 1574-1579
-
-
Rangan, P.1
Masquida, B.2
Westhof, E.3
Woodson, S.A.4
-
26
-
-
0014378880
-
The origin of the genetic code
-
Crick,F.H.C. (1968) The origin of the genetic code. J. Mol. Biol., 38, 367-379.
-
(1968)
J. Mol. Biol
, vol.38
, pp. 367-379
-
-
Crick, F.H.C.1
-
27
-
-
0014369024
-
Evolution of the genetic apparatus
-
Orgel,L.E. (1968) Evolution of the genetic apparatus. J. Mol. Biol. 38, 381-393.
-
(1968)
J. Mol. Biol
, vol.38
, pp. 381-393
-
-
Orgel, L.E.1
-
28
-
-
36849148382
-
The RNA world
-
Gilbert,W. (1986) The RNA world. Nature, 319, 618.
-
(1986)
Nature
, vol.319
, pp. 618
-
-
Gilbert, W.1
-
29
-
-
0003604405
-
-
3rd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Gesteland,R.F., Cech,T.R. and Atkins,J.F. (2006) The RNA World, 3rd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(2006)
The RNA World
-
-
Gesteland, R.F.1
Cech, T.R.2
Atkins, J.F.3
-
30
-
-
0034956301
-
The descent of polymerization
-
Levy,M. and Ellington,A.D. (2001) The descent of polymerization. Nat. Struct. Biol., 8, 580-582.
-
(2001)
Nat. Struct. Biol
, vol.8
, pp. 580-582
-
-
Levy, M.1
Ellington, A.D.2
-
31
-
-
0022649937
-
The intervening sequence RNA of Tetrahymena is an enzyme
-
Zaug,A.J. and Cech,T.R. (1986) The intervening sequence RNA of Tetrahymena is an enzyme. Science, 231, 470-475.
-
(1986)
Science
, vol.231
, pp. 470-475
-
-
Zaug, A.J.1
Cech, T.R.2
-
32
-
-
0348136386
-
Generalized RNA-directed recombination of RNA
-
Riley,C.A. and Lehman,N. (2003) Generalized RNA-directed recombination of RNA. Chem. Biol., 10, 1233-1243.
-
(2003)
Chem. Biol
, vol.10
, pp. 1233-1243
-
-
Riley, C.A.1
Lehman, N.2
-
33
-
-
56149124653
-
A recombination-based model for the origin and early evolution of genetic information
-
Lehman,N. (2008) A recombination-based model for the origin and early evolution of genetic information. Chem. Biodivers, 5, 1707-1717.
-
(2008)
Chem. Biodivers
, vol.5
, pp. 1707-1717
-
-
Lehman, N.1
-
34
-
-
0026574207
-
Recent evidence for the evolution of the genetic code
-
Osawa,S., Jukes,T.H., Watanabe,K. and Muto,A. (1992) Recent evidence for the evolution of the genetic code. Microbiol. Rev., 56, 229-264.
-
(1992)
Microbiol. Rev
, vol.56
, pp. 229-264
-
-
Osawa, S.1
Jukes, T.H.2
Watanabe, K.3
Muto, A.4
-
35
-
-
0029258928
-
Keeping RNA happy
-
Uhlenbeck,O.C. (1995) Keeping RNA happy. RNA, 1, 1-4.
-
(1995)
RNA
, vol.1
, pp. 1-4
-
-
Uhlenbeck, O.C.1
-
36
-
-
0033485559
-
Non-unity molecular heritability demonstrated by continuous evolution in vitro
-
Schmitt,T. and Lehman,N. (1999) Non-unity molecular heritability demonstrated by continuous evolution in vitro. Chem. Biol., 6 857-869.
-
(1999)
Chem. Biol
, vol.6
, pp. 857-869
-
-
Schmitt, T.1
Lehman, N.2
-
37
-
-
0034667684
-
Placticity, evolvability, and modularity in RNA
-
Ancel,L.W. and Fontana,W. (2000) Placticity, evolvability, and modularity in RNA. J. Exp. Zool., 288, 242-283.
-
(2000)
J. Exp. Zool
, vol.288
, pp. 242-283
-
-
Ancel, L.W.1
Fontana, W.2
-
38
-
-
0034698298
-
One sequence, two ribozymes: Implications for the emergence of new ribozyme folds
-
Schultes,E.A. and Bartel,D.P. (2000) One sequence, two ribozymes: implications for the emergence of new ribozyme folds. Science, 289, 448-452.
-
(2000)
Science
, vol.289
, pp. 448-452
-
-
Schultes, E.A.1
Bartel, D.P.2
-
39
-
-
0017667182
-
The hypercycle: A principle of natural self-organization. Part A: Emergence of the hypercycle
-
Eigen,M. and Schuster,P. (1977) The hypercycle: A principle of natural self-organization. Part A: Emergence of the hypercycle. Naturwissenschaften, 64, 541-565.
-
(1977)
Naturwissenschaften
, vol.64
, pp. 541-565
-
-
Eigen, M.1
Schuster, P.2
-
41
-
-
0037102491
-
The non-Watson-Crick base pairs and their associated isostericity matricies
-
Leontis,N.B., Stombaugh,J. and Westhof,E. (2002) The non-Watson-Crick base pairs and their associated isostericity matricies. Nucleic Acids Res., 30, 3497-3531.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 3497-3531
-
-
Leontis, N.B.1
Stombaugh, J.2
Westhof, E.3
|