Accuracy of positional information provided by multiple morphogen gradients with correlated noise

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics

Volumn 79, Issue 6, 2009, Pages

  Morishita, Yoshihiro ^a,b   Iwasa, Yoh ^a  

^a KYUSHU UNIVERSITY   (Japan)

^b JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

COMBINED INFORMATIONS; CORRELATED NOISE; DEVELOPMENTAL SYSTEMS; DROSOPHILA EMBRYOS; EXPERIMENTAL DATA; HIGH PRECISION; MORPHOGEN GRADIENTS; MORPHOGENS; MULTICELLULAR ORGANISMS; POSITIONAL INFORMATION; SINGLE-AXIS; SPATIAL GRADIENTS; SPATIAL POSITIONS; SPATIAL PROFILES;

CELL MEMBRANES; CHEMICALS; MAXIMUM LIKELIHOOD ESTIMATION;

BIOINFORMATICS;

EID: 67650915441     PISSN: 15393755     EISSN: 15502376     Source Type: Journal    
DOI: 10.1103/PhysRevE.79.061905     Document Type: Article

References (38)

1. L. Wolpert, Principles of Development (Oxford University Press, New York, 1998).
2. A. A. Teleman and S. M. Cohen, Cell 103, 971 (2000). 10.1016/S0092- 8674(00)00199-9
3. A. A. Teleman, M. Strigini, and S. M. Cohen, Cell 105, 559 (2001). 10.1016/S0092-8674(01)00377-4
4. M. Strigini and S. M. Cohen, Curr. Biol. 10, 293 (2000). 10.1016/S0960-9822(00)00378-X
5. A. D. Lander, Q. Nie, and F. Y. M. Wan, Dev. Cell 2, 785 (2002). 10.1016/S1534-5807(02)00179-X
6. T. B. Kornberg and A. Guha, Curr. Opin. Genet. Dev. 17, 264 (2007). 10.1016/j.gde.2007.05.010
7. M. Gonzalez-Gaitan, Natl. Prod. Rev. 4, 213 (2003).
8. L. Wolpert, J. Theor. Biol. 25, 1 (1969). 10.1016/S0022-5193(69)80016-0
9. J. B. Gurdon and P. Y. Bourillot, Nature (London) 413, 797 (2001). 10.1038/35101500
10. H. L. Ashe and J. Briscoe, Development 133, 385 (2006). 10.1242/dev.02238
11. M. Freeman, Nature (London) 408, 313 (2000). 10.1038/35042500
12. J. Jaeger, D. Irons, and N. Monk, Development 135, 3175 (2008). 10.1242/dev.018697
13. B. Houchmandzadeh, E. Wieschaus, and S. Leibler, Nature (London) 415, 798 (2002). 10.1038/415798a
14. T. Gregor, D. W. Tank, E. F. Wieschaus, and W. Bialek, Cell 130, 153 (2007). 10.1016/j.cell.2007.05.025
15. T. Gregor, E. F. Wieschaus, A. P. McGregor, W. Bialek, and D. W. Tank, Cell 130, 141 (2007). 10.1016/j.cell.2007.05.026
16. S. G. Megason and S. E. Fraser, Cell 130, 784 (2007). 10.1016/j.cell.2007.08.031
17. J. Paulsson, Nature (London) 427, 415 (2004). 10.1038/nature02257
18. T. Shibata and K. Fujimoto, Proc. Natl. Acad. Sci. U.S.A. 102, 331 (2005). 10.1073/pnas.0403350102
19. Y. Morishita, T. J. Kobayashi, and K. Aihara, J. Theor. Biol. 235, 241 (2005). 10.1016/j.jtbi.2005.01.007
20. Y. Morishita, T. J. Kobayashi, and K. Aihara, Biophys. J. 91, 2072 (2006). 10.1529/biophysj.105.070797
21. B. Houchmandzadeh, E. Wieschaus, and S. Leibler, Phys. Rev. E 72, 061920 (2005). 10.1103/PhysRevE.72.061920
22. T. Bollenbach, K. Kruse, P. Pantazis, M. Gonzalez-Gaitan, and F. Julicher, Phys. Rev. Lett. 94, 018103 (2005). 10.1103/PhysRevLett.94.018103
23. M. Howard and P. Rein ten Wolde, Phys. Rev. Lett. 95, 208103 (2005). 10.1103/PhysRevLett.95.208103
24. T. Aegerter-Wilmsen, C. M. Aegerter, and T. Bisseling, J. Theor. Biol. 234, 13 (2005). 10.1016/j.jtbi.2004.11.002
25. A. Eldar, D. Rosin, B.-Z. Shilo, and N. Barkai, Dev. Cell 5, 635 (2003). 10.1016/S1534-5807(03)00292-2
26. R. A. Veitia and H. F. Nijhout, BioEssays 28, 282 (2006). 10.1002/bies.20377
27. F. Tostevin, P. R. ten Wolde, and M. Howard, PLOS Comput. Biol. 3, e78 (2007). 10.1371/journal.pcbi.0030078
28. J. Jaeger and J. Reinitz, BioEssays 28, 1102 (2006). 10.1002/bies.20494
29. S. Gilbert, Developmental Biology, 8th ed. (Sinauer Associates, Sunderland, CT, 2006).
30. A. Spirov, K. Fahmy, M. Schneider, E. Frei, M. Noll, and S. Baumgartner, Development 136, 605 (2009). 10.1242/dev.031195
31. G. T. Reeves, C. B. Muratov, T. Schupbach, and S. Y. Shvartsman, Dev. Cell 11, 289 (2006). 10.1016/j.devcel.2006.08.006
32. Y. Morishita and Y. Iwasa, Phys. Rev. E 77, 041909 (2008). 10.1103/PhysRevE.77.041909
33. T. Bollenbach, P. Pantazis, A. Kicheva, C. Bokel, M. Gonzalez-Gaitan, and F. Julicher, Development 135, 1137 (2008). 10.1242/dev.012062
34. J. Jaeger, S. Surkova, M. Blagov, H. Janssens, D. Kosman, K. N. Kozlov, Manu, E. Myasnikova, C. E. Vanario-Alonso, M. Samsonova, D. H. Sharp, and J. Reinitz, Nature (London) 430, 368 (2004). 10.1038/nature02678
35. http://flyex.ams.sunysb.edu/FlyEx/
36. E. Myasnikova, M. Samsonova, D. Kosman, and J. Reinitz, Dev. Genes Evol. 215, 320 (2005). 10.1007/s00427-005-0472-2
37. N. Yakovy, J. Lembong, T. Schupbach, and S. Y. Shvartsman, Development 135, 343 (2008).
38. S. Bergmann, O. Sandler, H. Sberro, S. Shnider, E. Schejter, B-Z. Shilo, and N. Barkai, PLOS Comput. Biol. 5, e46 (2007).