Architectural implications of nanoscale integrated sensing and computing

ACM SIGPLAN Notices

Volumn 44, Issue 3, 2009, Pages 13-24

  Pistol, Constantin ^a   Chongchitmate, Wutichai ^a   Dwyer, Christopher ^b   Lebeck, Alvin R ^a  

^a Duke University   (United States)

^b Duke University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ENERGY TRANSFER; NANOTECHNOLOGY; QUANTUM OPTICS; VIRUSES;

COMMUNICATION TRANSCEIVERS; COMPUTING DOMAIN; INTEGRATED SENSING; MEMORY FOOTPRINT; MOLECULAR PROBES; NANOSCALE SENSORS; OPTICAL RESONANCE; TARGET APPLICATION;

COMPUTATION THEORY;

EID: 67650789341     PISSN: 15232867     EISSN: None     Source Type: Journal    
DOI: 10.1145/1508284.1508247     Document Type: Conference Paper

References (27)

1. H. Abelson, et al., "Amorphous Computing," Communications of the ACM, vol. 43 (5), pp. 74-82, 2000.
2. A. Bachtold, et al., "Logic Circuits with Carbon Nanotube Transistors," Science, vol. 294, pp. 1317-1320, 2001.
3. A. P. de Silva and N. D. McClenaghan, "Molecular-Scale Logic Gates," Chemistry - A European Journal, vol. 10 (3), pp. 574-586, 2004.
4. C. Dwyer, et al., "DNA Self-assembled Parallel Computer Architectures," Nanotechnology, vol. 15, pp. 1688-1694, 2004.
5. C. Dwyer, et al., "Energy Transfer Logic on DNA Nano-structures: Enabling Molecular-Scale Amorphous Computing," in Proceedings of the 4th Workshop on Non-Silicon Computing (NSC4), pp. 33-40, 2007.
6. D. Endy, "Foundations for Engineering Biology," Nature, vol. 438 (7067), pp. 449-453, 2005.
7. F. Faggin and M. E. Hoff, "Standard parts and custom design merge in four-chip processor kit," Electronics, pp. 112-116, 1972.
8. S. Freescale, "MC9RS08KA2, MC9RS08KA2 Datasheet," 2007.
9. I. Golding, et al., "Real-Time Kinetics of Gene Activity in Individual Bacteria," Cell, vol. 123 (6), pp. 1025-1036, 2005.
10. M. Heilemann, et al., "Carbocyanine Dyes As Efficient Reversible Single-molecule Optical Switch," Journal of the American Chemical Society, vol. 127 (11), pp. 3801-3806, 2005.
11. J. Hill, et al., "System Architecture Directions for Networked Sensors," in Proceedings of the Ninth International Conference on Architectural Support for Programming Languages and Operating Systems, pp. 93-104, 2000.
12. Y. Huang, et al., "Logic Gates and Computation from Assembled Nanowire Building Blocks," Science, vol. 294, pp. 1313-1317, 2001.
13. P. Juang, et al., "Energy-efficient Computing for Wildlife Tracking: Design Tradeoffs and Early Experiences with Zebranet," in Proceedings of the 10th International Conference on Architectural Support for Programming Languages and Operating Systems, pp. 96-107, 2002.
14. J. R. Lakowicz, Principles of Fluorescence Spectrosco-py. New York: Kluwer Academic / Plenum Publishers, 1999.
15. F. Patolsky, et al., "Electrical Detection of Single Viruses," Proceedings of the National Academy of Sciences, vol. 101 (39), pp. 14017-14022, 2004.
16. J. P. Patwardhan, et al., "NANA: a Nano-scale Active Network Architecture," J. Emerg. Technol. Comput. Syst., vol. 2 (1), pp. 1-30, 2006.
17. J. P. Patwardhan, et al., "A Defect Tolerant Self-organizing Nanoscale SIMD Architecture," in Proceedings of the 12th International Conference on Architectural Support for Programming Languages and Operating Systems, pp. 241-251, 2006.
18. C. Pistol and C. Dwyer, "Scalable, low-cost, hierarchical assembly of programmable DNA nanostructures," Nano-technology, vol. 18, pp. 125305-9, 2007.
19. C. Pistol, et al., "Nanoscale Optical Computing using Resonance Energy Transfer Logic," IEEE Micro, vol 28 (6) Nov-Dec, 2008.
20. R. L. Rich and D. G. Myszka, "Survey of the year 2001 commercial optical biosensor literature," Journal of Molecular Recognition, vol. 15 (6), pp. 352-376, 2002.
21. Stmicroelectronics, "ST6200C/ST6201C/ST6203C Datasheet," 2007.
22. M. Suzan-Monti, et al., "Genomic and evolutionary aspects of Mimivirus," Virus Research, vol. 1 (117), pp. 145-155, 2006.
23. C. M. Tsai and C. E. Frasch, "A sensitive silver stain for detecting lipopolysaccharides in polyacrylamide gels," Anal Biochem, vol. 119 (1), pp. 115-119, 1982.
24. T. Vo-Dinh, et al., "DNA Biochip Using a Phototransis-tor Integrated Circuit," Analytical Chemistry, vol. 71 (2), pp. 358-363, 1999.
25. A. J. Wand, "Dynamic activation of protein function: A view emerging from NMR spectroscopy," Nature Structural Biology, vol. 8 (11), pp. 926-931, 2001.
26. B. Zhai, et al., "A 2.60pj/inst Subthreshold Sensor Processor for Optimal Energy Efficiency," VLSI Circuits, 2006. Digest of Technical Papers. 2006 Symposium on, pp. 154-155, 2006.
27. T. Zhang, et al., "Recent Progress in Carbon Nanotube-based Gas Sensors," Nanotechnology, vol. 19 (33), 2008.