Presence of sulfate does not inhibit low-temperature dolomite precipitation

Earth and Planetary Science Letters

Volumn 285, Issue 1-2, 2009, Pages 131-139

  Sánchez Román, Mónica ^a,b,c   McKenzie, Judith A ^a   de Luca Rebello Wagener, Angela ^d   Rivadeneyra, Maria A ^c   Vasconcelos, Crisógono ^a  

^a GEOLOGICAL INSTITUTE   (Switzerland)

^b UNIVERSITY OF GEORGIA   (United States)

^c UNIVERSITY OF GRANADA   (Spain)

^d PONTIFICAL CATHOLIC UNIVERSITY OF RIO DE JANEIRO   (Brazil)

Author keywords

dolomite; dumbbell and spheroid crystal morphology; moderately halophilic aerobic bacteria; sulfate inhibition model

Indexed keywords

AEROBIC BACTERIUM; AEROBIC CULTURES; CULTURE MEDIA; DIRECT PRECIPITATION; DOLOMITE; DOLOMITE FORMATIONS; DUMBBELL AND SPHEROID CRYSTAL MORPHOLOGY; EARTH'S SURFACE; HALOMONAS; KINETIC FACTORS; LOW TEMPERATURES; MODERATELY HALOPHILIC AEROBIC BACTERIA; PORE WATERS; REPLACEMENT REACTIONS; SEDIMENTARY DOLOMITES; SEDIMENTARY SEQUENCE; SULFATE CONCENTRATIONS; SULFATE INHIBITION MODEL;

BACTERIOLOGY; MORPHOLOGY; SEDIMENTOLOGY; SUBSTITUTION REACTIONS;

EXPERIMENTS;

BACTERIUM; BIOGEOCHEMISTRY; DOLOMITE; EXPERIMENTAL STUDY; INHIBITOR; POREWATER; PRECIPITATION (CHEMISTRY); REACTION KINETICS; SEDIMENT CHEMISTRY; SULFATE; TESTING METHOD;

HALOMONAS MERIDIANA; VIRGIBACILLUS MARISMORTUI;

EID: 67650725440     PISSN: 0012821X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.epsl.2009.06.003     Document Type: Article

References (74)

1. Ahimou F., Denis F.A., Touhami A., and Dufrene Y.F. Probing microbial cell surface charges by atomic force microscopy. Langmuir 18 (2002) 9937-9941
2. Amiri-Garroussi K. Eocene spheroidal dolomite from the western Sirte Basin, Libya. Sedimentology 35 (1988) 577-585
3. Arahal D.R., Marquez M.C., Volcani B.E., Schleifer K.H., and Ventosa A. Bacillus marismortui sp. nov., a new moderately halophilic species from the Dead Sea. Int. J. Syst. Bacteriol. 49 (1999) 521-530
4. Baker P.A., and Burns S.J. Occurrence and formation of dolomite in organic-rich continental margin sediments. Am. Assoc. Pet. Geol. Bull. 69 (1985) 1917-1930
5. Baker P.A., and Kastner M. Constraints on the formation of sedimentary dolomite. Science 213 (1981) 214-216
6. Birgel D., Himmler T., Freiwald A., and Peckmann J. A new constraint on the antiquity of anaerobic oxidation of methane: Late Pennsylvanian seep limestones from southern Nabia. Geology 36 (2008) 543-546
7. Boetius A., Ravenschlag K., Schubert C.J., Rickert D., Widdel F., Gieseke A., Amann R., JØrgensen B.B., Witte U., and Pfannkuche O. A marine microbial consortium apparently mediating anaerobic oxidation of methane. Nature 407 (2000) 623-626
8. Bontognali T., McKenzie J.A., Warthmann R., and Vasconcelos C. Microbial mediated mineralization in the extreme hypersaline sabkha environment of Abu Dhabi (UAE). EOS Trans. AGU vol. 86(52) (2005) Fall Meet. Suppl., P51D-0952
9. Borhade A.V., and Patil S.P. Diffusion of manganese ions in agar gel containing alkali metal chlorides. J. Radioanal. Nucl. Chem. 245 (2000) 395-398
10. Brady P.V., Krumhanst J.L., and Papength H.W. Surface complexation clues to dolomite growth. Geochim. Cosmochim. Acta 60 (1996) 727-731
11. Braissant O., Cailleau G., Dupraz C., and Verrecchia A.P. Bacterially induced mineralization of calcium carbonate in terrestrial environment: the role of exopolysaccharides and amino-acids. J. Sediment. Res. 73 (2003) 485-490
12. Buczynski C., and Chafetz H.S. Habit of bacterially induced precipitates of calcium carbonate and the influence of medium viscosity on mineralogy. J. Sediment. Petrol. 61 (1991) 226-233
13. Campbell K.A. Hydrocarbon seep and hydrothermal vent paleoenvironmnets and paleontology: past developments and future research directions. Palaeogeogr. Palaeoclimatol. Palaeoecol. 232 (2006) 362-407
14. Carballo J.D., Land L.S., and Miser D.E. Holocene dolomitization of supratidal sediments by active tidal pumping, Sugarloaf Key, Florida. J. Sediment. Petrol. 57 (1987) 153-167
15. Castanier S., Métayer-Levrel G.L., and Perthuisot J.P. Ca-carbonates precipitation and limestone genesis - the microbiogeologist point of view. Sediment. Geol. 126 (1999) 9-23
16. Chafetz H.S., and Buczynski C. Bacterially induced lithification of miocrobial mats. Palaios 7 (1992) 277-293
17. Coleman M.L. Geochemistry of diagenetic non-silicate minerals; kinetic considerations. Philos. Trans. R. Soc. Lond. A315 (1985) 39-56
18. Compton J.S. Degree of supersaturation and precipitation of organogenic dolomite. Geology 16 (1988) 318-321
19. Coshell L., Rosen C., and Mcnamara M.R. Hydromagnesite replacement of biomineralized aragonite in a new location of Holocene stromatolites, Lake Walyungup, Western Australia. Sedimentology 45 (1998) 1005-1018
20. De Deckker P., and Last W.M. Modern dolomite deposition in continental, saline lakes, western Victoria, Australia. Geology 16 (1988) 29-32
21. Deelman J.C. Low-temperature nucleation of magnesite and dolomite. Neues Jahrbuch für Mineralogie, Monatshefte, Stuttgart (1999) 289-302
22. Ehrlich H.L. Geomicrobiology. 4th ed. (2002), Marcel Dekker, New York 768 pp.
23. Fernandez-Diaz L., Astilleros J.M., and Pina C.M. The morphology of calcite crystals grown in a porous medium doped with divalent cations. Chem. Geol. 225 (2005) 314-321
24. Ferris F.G., Fyfe W.S., and Beveridge T.J. Bacteria as nucleation sites for authigenic minerals. In: Berthelin J. (Ed). Diversity of Environmental Geochemistry, Development in Geochemistry vol. 6 (1991), Elsevier, Amsterdam 319-326
25. Golden D.C., Ming D.W., Schwandt C.S., Lauer Jr. H.V., SockiI R.A., Morris R.V., Lofgren G.E., and Mckay G.A. A simple inorganic process for formation of carbonates, magnetite, and sulfides in Martian meteorite ALH84001. Am. Mineral. 86 (2001) 370-375
26. Guanatilaka A. Spheroidal dolomites-origin by hydrocarbon seepage?. Sedimentology 36 (1989) 701-710
27. Guanatilaka A., Al-Zamel A., Shearman D.J., and Reda A. A spherulitic fabric in selectively dolomitized siliciclastic crustacean burrows, north Kuwait. J. Sediment. Res. 57 (1987) 922-927
28. Hardie L.A. Perspective on dolomitization: a critical view of some current views. J. Sediment. Petrol. 57 (1987) 166-183
29. James S.R., Dobson S.J., Franzmann P.D., and McMeekin T.A. Halomonas meridiana, a new species of extremely halotolerant bacteria isolated from Antarctic saline lakes. Syst. Appl. Microbiol. 13 (1990) 270-277
30. Kastner M. Control of dolomite formation. Nature 311 (1984) 410-411
31. Kelts K., and McKenzie J.A. Diagenetic Dolomite Formation in Quaternary Anoxic Diatomaceous Muds of DSDP Leg 64, Gulf of California: Initial Reports of the Deep Sea Drilling Project vol. 64 (1982) 553-569 Part 2
32. Last W.M., and Ginn F.W. Saline system of the Great Plains of western Canada: an overview of the limnogeology and paleolimnology. Saline Syst. 1 (2005) 1-38
33. Lee D.J., and Golubic S. Microfossil population in the context of synsedimentary micrite deposition and acicular carbonate precipitation: Mesoproterozoic Gaoyuzhang Formation, China. Precambrian Res. 96 (1999) 183-208
34. Lippman F. Sedimentary Carbonate Minerals (1973), Springer-Verlag, New York 228 pp.
35. Lowenstam H.A., and Weiner S. On Biomineralization (1989), Oxford University Press 324 pp.
36. Mansfield C.F. A urolith of biogenic dolomite-another clue in the dolomite mystery. Geochim. Cosmochim. Acta 44 (1980) 829-839
37. Mastandrea A., Perri E., Russo F., Spadafora A., and Tucker M. Microbial primary dolomite from a Norian carbonate platform: northern Calabria, southern Italy. Sedimentology 53 (2006) 465-480
38. Mazzullo S.J. Organogenic dolomitization in peritidal to deep-sea sediments. J. Sediment. Res. 70 (2000) 10-23
39. McKenzie J.A. The dolomite problem: an outstanding controversy. In: Müller D.W., McKenzie J.A., and Weissert H. (Eds). Controversies in Modern Geology (1991), Academic Press, London 35-54
40. Meister P., McKenzie J.A., Vasconcelos C., Bernasconi S., Frank M., and Gutjahr M. Dolomite formation in the dynamic deep biosphere: results from the Peru margin. Sedimentology 54 (2007) 1007-1031
41. Moreira N.F., Walter L.M., Vasconcelos C., McKenzie J.A., and McCall J.P. Role of sulfide oxidation in dolomitization: sediment and pore-water geochemistry of a modern hypersaline lagoon system. Geology 32 (2004) 701-704
42. Morita R.Y. Calcite precipitation by marine bacteria. Geomicrobiol. J. 2 (1980) 63-82
43. Morse J.W., Arvidson R.S., and Lüttge A. Calcium carbonate formation and dissolution. Chem. Rev. 107 (2007) 342-381
44. Nielsen P., Swennen R., Dickson J.A.D., Fallicks A.E., and Keppens E. Spheroidal dolomites in a visean karst system-bacterial induced origin?. Sedimentology 44 (1997) 177-195
45. Oren A. Halophilic microorganisms and their environments. In: Seckbach J. (Ed). Cellular Origin and Life in Extreme Habitats vol. 5 (2002), Kluwer Academic, Dordrecht, The Netherlands 600 pp.
46. Orphan V.J., House C.H., Hinrichs K.U., McKeegan K.D., and DeLong E.F. Methane-consuming archaea revealed by directly coupled isotopic and phylogenetic analysis. Science 293 (2001) 484-487
47. In: Page A.L., Miller R.H., and Keeny D.R. (Eds). Methods of Soil Analysis, Part 2, Chemical and Microbiological Properties (1982), American Society of Agronomy and Soil Science Society of America, Madison WI, USA
48. Parkhust D.L., and Appelo C.A.J. User's guide to PHREEQC (version 2) - a computer program for speciation, batch reaction, one-dimensional transport, and inverse geochemical calculations. Water-Resources Investigations Report 99-4259 (1999), US Geological Survey, Denver, CO
49. Peckmann J., and Thiel V. Carbon cycling at ancient methane-seeps. Chem. Geol. 205 (2004) 443-467
50. 137Cs in agar gel containing alkali metal chlorides: obstruction effects and activation energy. J. Mol. Liq. 122 (2005) 49-54
51. Renaut R.W. Recent carbonate sedimentation and brine evolution in the saline lake basis of the Cariboo Plateau, British Columbia, Canada. Hidrobiologia 197 (1990) 67-81
52. Ritgel S., Carson B., and Suess E. Methane-derived authigenic carbonates formed by subduction-induced pore-water expulsion along the Oregon/Washington margin. Geol. Soc. Amer. Bull. 98 (1987) 147-156
53. Rivadeneyra M.A., Delgado R., Delgado G., Del Moral A., Ferrer M.R., and Ramos-Cormenzana A. Precipitation of carbonates by Bacillus sp. isolated from saline soils. Geomicrobiol. J. 11 (1993) 175-185
54. Rivadeneyra M.A., Delgado R., Parraga J., Ramos-Cormenzana A., and Delgado G. Precipitation of minerals by 22 species of moderately halophilic aerobic bacteria in artificial marine salts media: influence of salt concentration. Folia Microbiol. 51 (2006) 445-453
55. Rivadeneyra M.A., Delgado G., Ramos-Cormenzana A., and Delgado R. Biomineralization of carbonates by Halomonas eurihalina in solid and liquid media with different salinities: crystal formation sequence. Res. Microbiol. 149 (1998) 277-286
56. Rivadeneyra M.A., Delgado G., Soriano M., Ramos-Cormenzana A., and Delgado R. Precipitation of carbonates by Nesteronkina halobia in liquid media. Chemosphere 41 (2000) 617-624
57. Rivadeneyra M.A., Párraga J., Delgado R., Ramos-Cormenzana A., and Delgado G. Biomineralization of carbonates by Halobacillus trueperi in solid and liquid media with different salinities. FEMS Microbiol. Ecol. 48 (2004) 39-46
58. Rosen M.R., Miser D.E., and Warren J.K. Sedimentology, mineralogy and isotopic analysis of Pellet Lake, Coorong Region, South Australia. Sedimentology 35 (1988) 105-122
59. Sánchez-Román, M., 2006. Calibration of Microbial and Geochemical Signals Related to Dolomite Formation by Moderately Halophilic Aerobic Bacteria: Significance and Implication of Dolomite in the Geologic Record, PhD Dissertation Nr. 16875, ETH-Zürich, Switzerland.
60. 2+ ions. FEMS Microbiol. Ecol. 61 (2007) 273-284
61. Sánchez-Román M., Vasconcelos C., Schmid T., Dittrich M., McKenzie J.A., Zenobi R., and Rivadeneyra M.A. Aerobic microbial dolomite at the nanometer scale: implications for the geologic record. Geology 36 (2008) 879-882
62. Sánchez-Román M., Vasconcelos C., Warthmann R., Rivadeneyra M.A., and McKenzie J.A. Microbial Dolomite Precipitation under Aerobic Conditions: Results from Brejo do Espinho Lagoon (Brazil) and Culture Experiments. IAS Spec Publ vol. 41 (2009) 167-178
63. Siegel F.R. Factors influencing the precipitation of dolomitic carbonates. Geol. Surv. Kansas Bull. 152 (1961) 129-158
64. Tracy S.L., Francois C.J.P., and Jennings H.M. The growth of calcite spherulites from solution: I. experimental design techniques. J. Cryst. Growth 193 (1998) 374-381
65. van Lith Y., Vasconcelos C., Warthmann R., Martins J.C.F., and McKenzie J.A. Bacterial sulfate reduction and sanity: two controls on dolomite precipitation in Lagoa Vermelha and Brejo do Espinho (Brazil). Hydrobiologia 485 (2002) 35-49
66. van Lith Y., Vasconcelos C., Warthmann R., and McKenzie J.A. Sulphate-reducing bacteria induce low-temperature Ca-dolomite and high Mg-calcite formation. Geobiology 1 (2003) 71-79
67. Van Tuyl F.M. The origin of dolomite. Iowa Geol. Surv. Ann. Rept., 25 (1916) 251-421
68. Vasconcelos C., and McKenzie J.A. Microbial mediation of modern dolomite precipitation and diagenesis under anoxic conditions (Lagoa Vermelha, Rio de Janeiro, Brazil). J. Sediment. Res. 67 (1997) 378-390
69. Von der Borch C.C., and Jones J.B. Spherular modern dolomite from the Coorong area, South Australia. Sedimentology 23 (1976) 587-591
70. Warren J.K. Sedimentology and mineralogy of dolomitic Coorong Lakes, South Australia. J. Sediment. Petrol. 60 (1990) 843-858
71. Warren J. Dolomite: occurrence, evolution and economically important associations. Earth-Sci. Rev. 52 (2000) 1-81
72. Warthmann R., van Lith Y., Vasconcelos C., McKenzie J.A., and Karpoff A.M. Bacterially induced dolomite precipitation in anoxic culture experiments. Geology 28 (2000) 1091-1094
73. Wright D.T. The role of sulphate-reducing bacteria and cyanobacteria in dolomite formation in distal ephemeral lakes of the Coorong region, South Australia. Sediment. Geol. 126 (1999) 147-157
74. Wright D.T., and Wacey D. Precipitation of dolomite using sulfate-reducing bacteria from the Coorong Region, South Australia: significance and implications. Sedimentology 52 (2005) 987-1008