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Volumn , Issue , 2009, Pages 183-192

Source coding scheme for multiple sequence alignments

Author keywords

[No Author keywords available]

Indexed keywords

BLACK AND WHITE IMAGES; COMPRESSION RATES; DATA SETS; DNA SEQUENCING; GENOMIC DATA; LEMPEL-ZIV ALGORITHMS; LOSSLESS; MULTIPLE SEQUENCE ALIGNMENTS; RAPID DEVELOPMENT; SOURCE-CODING;

EID: 67650700169     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/DCC.2009.64     Document Type: Conference Paper
Times cited : (1)

References (20)
  • 2
    • 38549131376 scopus 로고    scopus 로고
    • D. Karolchik, R. Kuhn, R. Baertsch, G. Barber, H. Clawson, M. Diekhans, B. Giardine, R. Harte, A. Hinrichs, F. Hsu et al., The UCSC Genome Browser Database: 2008 update, Nucleic Acids Research, 36, no. Database issue, p. D773, 2008.
    • D. Karolchik, R. Kuhn, R. Baertsch, G. Barber, H. Clawson, M. Diekhans, B. Giardine, R. Harte, A. Hinrichs, F. Hsu et al., "The UCSC Genome Browser Database: 2008 update," Nucleic Acids Research, vol. 36, no. Database issue, p. D773, 2008.
  • 3
    • 58149185123 scopus 로고    scopus 로고
    • T. Hubbard, B. Aken, S. Ayling, B. Ballester, K. Beal, E. Bragin, S. Brent, Y. Chen, P. Clapham, L. Clarke et al., Ensembl 2009, Nucleic Acids Research, 37, no. Database issue, p. D690, 2009.
    • T. Hubbard, B. Aken, S. Ayling, B. Ballester, K. Beal, E. Bragin, S. Brent, Y. Chen, P. Clapham, L. Clarke et al., "Ensembl 2009," Nucleic Acids Research, vol. 37, no. Database issue, p. D690, 2009.
  • 6
    • 34547630480 scopus 로고    scopus 로고
    • A simple statistical algorithm for biological sequence compression
    • IEEE Computer Society Washington, DC, USA
    • M. Cao, T. Dix, L. Allison, and C. Mears, "A simple statistical algorithm for biological sequence compression," in Proceedings of the 2007 Data Compression Conference. IEEE Computer Society Washington, DC, USA, 2007, pp. 43-52.
    • (2007) Proceedings of the 2007 Data Compression Conference , pp. 43-52
    • Cao, M.1    Dix, T.2    Allison, L.3    Mears, C.4
  • 13
    • 0030034795 scopus 로고    scopus 로고
    • A hidden markov model approach to variation among sites in rate of evolution
    • jan
    • J. Felsenstein and G. A. Churchill, "A hidden markov model approach to variation among sites in rate of evolution." Mol Biol Evol, vol. 13, no. 1, pp. 93-104, jan 1996.
    • (1996) Mol Biol Evol , vol.13 , Issue.1 , pp. 93-104
    • Felsenstein, J.1    Churchill, G.A.2
  • 14
    • 27544508958 scopus 로고    scopus 로고
    • I. Mayrose, N. Friedman, and T. Pupko, A gamma mixture model better accounts for among site rate heterogeneity. Bioinformatics, 21 Suppl 2, pp. ii151-8, Sep. 2005.
    • I. Mayrose, N. Friedman, and T. Pupko, "A gamma mixture model better accounts for among site rate heterogeneity." Bioinformatics, vol. 21 Suppl 2, pp. ii151-8, Sep. 2005.
  • 15
    • 43449130398 scopus 로고    scopus 로고
    • Local conservation scores without a priori assumptions on neutral substitution rates
    • J. Dingel, P. Hanus, N. Leonardi, J. Hagenauer, J. Zech, and J. Mueller, "Local conservation scores without a priori assumptions on neutral substitution rates," BMC Bioinformatics, vol. 9, no. 1, 2008.
    • (2008) BMC Bioinformatics , vol.9 , Issue.1
    • Dingel, J.1    Hanus, P.2    Leonardi, N.3    Hagenauer, J.4    Zech, J.5    Mueller, J.6
  • 16
    • 0004240547 scopus 로고
    • Practical optimization
    • Academic Press
    • P. Gill, W. Murray, and M. Wright, "Practical optimization," London: Academic Press, 1981.
    • (1981) London
    • Gill, P.1    Murray, W.2    Wright, M.3
  • 18
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • J. Felsenstein, "Evolutionary trees from DNA sequences: A maximum likelihood approach," Journal of Molecular Evolution, vol. 17, no. 6, pp. 368-376, 1981.
    • (1981) Journal of Molecular Evolution , vol.17 , Issue.6 , pp. 368-376
    • Felsenstein, J.1
  • 20
    • 38549182368 scopus 로고    scopus 로고
    • Adaptive Weighing of Context Models for Lossless Data Compression
    • Florida Tech. Technical Report CS-2005-16, Tech. Rep
    • M. Mahoney, "Adaptive Weighing of Context Models for Lossless Data Compression," Florida Tech. Technical Report CS-2005-16, 2005, Tech. Rep., 2005.
    • (2005)
    • Mahoney, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.