메뉴 건너뛰기




Volumn 10, Issue , 2009, Pages

DesignGG: An R-package and web tool for the optimal design of genetical genomics experiments

Author keywords

[No Author keywords available]

Indexed keywords

ASSOCIATION ANALYSIS; BIOLOGICAL INTERPRETATION; COMPLEX BIOLOGICAL SYSTEMS; ENVIRONMENTAL CONDITIONS; INTERACTION EFFECT; QUANTITATIVE TRAIT LOCUS; RECOMBINANT INBRED LINES; WEB IMPLEMENTATION;

EID: 67650666475     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-10-188     Document Type: Article
Times cited : (10)

References (21)
  • 1
    • 0035400051 scopus 로고    scopus 로고
    • Genetical genomics: The added value from segregation
    • 10.1016/S0168-9525(01)02310-1 11418218
    • Jansen RC Nap JP Genetical genomics: The added value from segregation Trends Genet 2001, 17(7):388-391. 10.1016/S0168-9525(01)02310-1 11418218
    • (2001) Trends Genet , vol.17 , Issue.7 , pp. 388-391
    • Jansen, R.C.1    Nap, J.P.2
  • 5
    • 13444306165 scopus 로고    scopus 로고
    • The landscape of genetic complexity across 5,700 gene expression traits in yeast
    • 547855 10.1073/pnas.0408709102
    • Brem RB Kruglyak L The landscape of genetic complexity across 5,700 gene expression traits in yeast Proc Natl Acad Sci USA 2005, 102(5):1572-1577. 547855 15659551 10.1073/pnas.0408709102
    • (2005) Proc Natl Acad Sci USA , vol.102 , Issue.5 , pp. 1572-1577
    • Brem, R.B.1    Kruglyak, L.2
  • 6
    • 52949116045 scopus 로고    scopus 로고
    • Generalizing genetical genomics: Getting added value from environmental perturbation
    • 10.1016/j.tig.2008.08.001 18774198
    • Li Y Breitling R Jansen RC Generalizing genetical genomics: Getting added value from environmental perturbation Trends Genet 2008, 24(10):518-524. 10.1016/j.tig.2008.08.001 18774198
    • (2008) Trends Genet , vol.24 , Issue.10 , pp. 518-524
    • Li, Y.1    Breitling, R.2    Jansen, R.C.3
  • 8
    • 0036900895 scopus 로고    scopus 로고
    • Fundamentals of experimental design for cDNA microarrays
    • 10.1038/ng1031 12454643
    • Churchill GA Fundamentals of experimental design for cDNA microarrays Nat Genet 2002, 32(Suppl):490-495. 10.1038/ng1031 12454643
    • (2002) Nat Genet , vol.32 , Issue.SUPPL. , pp. 490-495
    • Churchill, G.A.1
  • 9
    • 33645227656 scopus 로고    scopus 로고
    • Optimal design and analysis of genetic studies on gene expression
    • 1456314 10.1534/genetics.105.047001
    • Fu J Jansen RC Optimal design and analysis of genetic studies on gene expression Genetics 2006, 172(3):1993-1999. 1456314 16361243 10.1534/ genetics.105.047001
    • (2006) Genetics , vol.172 , Issue.3 , pp. 1993-1999
    • Fu, J.1    Jansen, R.C.2
  • 11
    • 0000884487 scopus 로고    scopus 로고
    • Experimental design for gene expression microarrays
    • 10.1093/biostatistics/2.2.183 12933549
    • Kerr MK Churchill GA Experimental design for gene expression microarrays Biostatistics 2001, 2(2):183-201. 10.1093/biostatistics/2.2.183 12933549
    • (2001) Biostatistics , vol.2 , Issue.2 , pp. 183-201
    • Kerr, M.K.1    Churchill, G.A.2
  • 12
    • 0036319960 scopus 로고    scopus 로고
    • Design issues for cDNA microarray experiments
    • 12154381
    • Yang YH Speed T Design issues for cDNA microarray experiments Nat Rev Genet 2002, 3(8):579-588. 12154381
    • (2002) Nat Rev Genet , vol.3 , Issue.8 , pp. 579-588
    • Yang, Y.H.1    Speed, T.2
  • 14
    • 27344443714 scopus 로고    scopus 로고
    • Near-optimal designs for dual-channel microarray studies
    • Wit E Nobile A khanin R Near-optimal designs for dual-channel microarray studies Applied Statistics 2005, 54(5):817-830.
    • (2005) Applied Statistics , vol.54 , Issue.5 , pp. 817-830
    • Wit, E.1    Nobile, A.2    Khanin, R.3
  • 15
    • 59449095964 scopus 로고    scopus 로고
    • Optimal design of genetic studies of gene expression with two-color microarrays in outbred crosses
    • 2581968 10.1534/genetics.108.090308
    • Lam AC Fu J Jansen RC Haley CS de Koning DJ Optimal design of genetic studies of gene expression with two-color microarrays in outbred crosses Genetics 2008, 180(3):1691-1698. 2581968 18791249 10.1534/ genetics.108.090308
    • (2008) Genetics , vol.180 , Issue.3 , pp. 1691-1698
    • Lam, A.C.1    Fu, J.2    Jansen, R.C.3    Haley, C.S.4    de Koning, D.J.5
  • 16
    • 33845803295 scopus 로고    scopus 로고
    • Review of microarray experimental design strategies for genetical genomics studies
    • 10.1152/physiolgenomics.00106.2006 16985008
    • Rosa GJ de Leon N Rosa AJ Review of microarray experimental design strategies for genetical genomics studies Physiol Genomics 2006, 28(1):15-23. 10.1152/physiolgenomics.00106.2006 16985008
    • (2006) Physiol Genomics , vol.28 , Issue.1 , pp. 15-23
    • Rosa, G.J.1    de Leon, N.2    Rosa, A.J.3
  • 17
    • 84860543404 scopus 로고    scopus 로고
    • Experimental design for three-color and four-color gene expression microarrays
    • 10.1093/bioinformatics/bti1031 15961491
    • Woo Y Krueger W Kaur A Churchill G Experimental design for three-color and four-color gene expression microarrays Bioinformatics 2005, 21(Suppl 1):i459-467. 10.1093/bioinformatics/bti1031 15961491
    • (2005) Bioinformatics , vol.21 , Issue.21 SUPPL. 1
    • Woo, Y.1    Krueger, W.2    Kaur, A.3    Churchill, G.4
  • 18
    • 27344443714 scopus 로고    scopus 로고
    • Simulated annealing for near-optimal dual-channel microarray designs
    • Wit E Nobile A Khanin R Simulated annealing for near-optimal dual-channel microarray designs Appl Statistics 2005, 54:817-830.
    • (2005) Appl Statistics , pp. 817-830
    • Wit, E.1    Nobile, A.2    Khanin, R.3
  • 20
    • 4544246778 scopus 로고    scopus 로고
    • Molecular Genetics Information System (MOLGENIS): Alternatives in developing local experimental genomics databases
    • 10.1093/bioinformatics/bth206 15059831
    • Swertz MA De Brock EO Van Hijum SA De Jong A Buist G Baerends RJ Kok J Kuipers OP Jansen RC Molecular Genetics Information System (MOLGENIS): alternatives in developing local experimental genomics databases Bioinformatics 2004, 20(13):2075-2083. 10.1093/bioinformatics/bth206 15059831
    • (2004) Bioinformatics , vol.20 , Issue.13 , pp. 2075-2083
    • Swertz, M.A.1    De Brock, E.O.2    Van Hijum, S.A.3    De Jong, A.4    Buist, G.5    Baerends, R.J.6    Kok, J.7    Kuipers, O.P.8    Jansen, R.C.9
  • 21
    • 33847033243 scopus 로고    scopus 로고
    • Beyond standardization: Dynamic software infrastructures for systems biology
    • 10.1038/nrg2048 17297480
    • Swertz MA Jansen RC Beyond standardization: Dynamic software infrastructures for systems biology Nat Rev Genet 2007, 8(3):235-243. 10.1038/nrg2048 17297480
    • (2007) Nat Rev Genet , vol.8 , Issue.3 , pp. 235-243
    • Swertz, M.A.1    Jansen, R.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.