Functional association of human Ki-1/57 with pre-mRNA splicing events

FEBS Journal

Volumn 276, Issue 14, 2009, Pages 3770-3783

  Bressan, Gustavo C ^a,b   Quaresma, Alexandre J C ^a   Moraes, Eduardo C ^a,b   Manfiolli, Adriana O ^c   Passos, Dario O ^a   Gomes, Marcelo D ^c   Kobarg, Jörg ^a,b  

^a LABORATÓRIO NACIONAL DE LUZ SÍNCROTRON   (Brazil)

^b UNIVERSITY OF CAMPINAS   (Brazil)

^c UNIVERSITY OF SÃO PAULO   (Brazil)

Author keywords

Arg methylation; Nuclear bodies; Protein protein interaction; RNA binding; Splicing

Indexed keywords

CD30 ANTIGEN; CELL EXTRACT; E1A PROTEIN; ENHANCED GREEN FLUORESCENT PROTEIN; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN Q; MESSENGER RNA PRECURSOR; NUCLEAR PROTEIN; POLYURIDYLIC ACID; RECOMBINANT ANTIGEN; SFRS9 PROTEIN; SMALL NUCLEAR RIBONUCLEOPROTEIN; UNCLASSIFIED DRUG; HABP4 PROTEIN, HUMAN; MYOGENIC FACTOR; RNA; RNA BINDING PROTEIN; RNA PRECURSOR; SERINE ARGININE RICH SPLICING PROTEINS; SERINE-ARGININE-RICH SPLICING PROTEINS;

AMINO ACID SEQUENCE; AMINO TERMINAL SEQUENCE; ANIMAL CELL; ARTICLE; BINDING SITE; CELL NUCLEUS INCLUSION BODY; CELL STRAIN COS7; CONFOCAL MICROSCOPY; CONTROLLED STUDY; FLUORESCENCE MICROSCOPY; GEL MOBILITY SHIFT ASSAY; HELA CELL; HUMAN; HUMAN CELL; IMMUNOPRECIPITATION; METHYLATION; NONHUMAN; PRIORITY JOURNAL; PROTEIN ASSEMBLY; PROTEIN LOCALIZATION; PROTEIN PROTEIN INTERACTION; PROTEIN RNA BINDING; RNA PROBE; RNA PROCESSING; RNA SPLICING; ANIMAL; CELL LINE; CERCOPITHECUS; CHEMISTRY; GENETICS; METABOLISM; MOLECULAR GENETICS; MOLECULAR WEIGHT; PROTEIN BINDING;

AMINO ACID SEQUENCE; ANIMALS; CELL LINE; CERCOPITHECUS AETHIOPS; HUMANS; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; MYOGENIC REGULATORY FACTORS; NUCLEAR PROTEINS; PROTEIN BINDING; RNA; RNA PRECURSORS; RNA SPLICING; RNA-BINDING PROTEINS;

EID: 67650660697     PISSN: 1742464X     EISSN: 17424658     Source Type: Journal    
DOI: 10.1111/j.1742-4658.2009.07092.x     Document Type: Article

References (48)

1. Schwab U, Stein H, Gerdes J, Lemke H, Kirchner H, Schaadt M Diehl V (1982) Production of a monoclonal antibody specific for Hodgkin and Sternberg-Reed cells of Hodgkin's disease and a subset of normal lymphoid cells. Nature 299, 65 67. (Pubitemid 12049770)
2. Rohde D, Hansen H, Hafner M, Lange H, Mielke V, Hansmann ML Lemke H (1992) Cellular localization and processing of the two molecular forms of the Hodgkin-associated Ki-1 (CD30) antigen. Am J Pathol 140, 473 482.
3. Hansen H, Lemke H, Bredfeldt G, Könnecke I Havsteen B (1989) The Hodgkin-associated Ki-1 antigen exists in an intracellular and a membrane-bound form. Biol. Chem. Hoppe-Seyler 370, 409 416. (Pubitemid 19136747)
4. Hansen H, Bredfeldt G, Havsteen B Lemke H (1990) Protein kinase activity of the intracellular but not the membrane-associated form of the Ki-1 antigen (CD30). Res Immunol. 141, 13 31. (Pubitemid 20140511)
5. Huang L, Grammatikakis N, Yoneda M, Banerjee SD Toole BP (2000) Molecular characterization of a novel intracellular hyaluronan-binding protein. J Biol Chem 275, 29829 29839. (Pubitemid 32043868)
6. Lemos TA Kobarg J (2006) CGI-55 interacts with nuclear proteins and co-localizes to p80-coilin positive-coiled bodies in the nucleus. Cell Biochem Biophys 44, 463 474. (Pubitemid 43780402)
7. Heaton JH, Dlakic WM, Dlakic M Gelehrter TD (2001) Identification and cDNA cloning of a novel RNA-binding protein that interacts with the cyclic nucleotide responsive sequence in the type-1 plasminogen activator inhibitor mRNA. J Biol Chem 276, 3341 3347.
8. Lemos TA, Passos DO, Nery FC Kobarg J (2003) Characterization of a new family of proteins that interact with the C-terminal region of the chromatin-remodeling factor CHD-3. FEBS Lett 533, 14 20. (Pubitemid 36206374)
9. Nery FC, Rui E, Kuniyoshi TM Kobarg J (2006) Evidence for the interaction of the regulatory protein Ki-1/57 with p53 and its interacting proteins. Biochem Biophys Res Commun 341, 847 855. (Pubitemid 43177567)
10. Kobarg CB, Kobarg J, Crosara-Alberto DP, Theizen TH Franchini KG (2005) MEF2C DNA-binding activity is inhibited through its interaction with the regulatory protein Ki-1/57. FEBS Lett 579, 2615 2622. (Pubitemid 40615667)
11. Nery FC, Passos DO, Garcia VS Kobarg J (2004) Ki-1/57 interacts with RACK1 and is a substrate for the phosphorylation by phorbol 12-myristate 13-acetate activated protein kinase C. J Biol Chem 279, 11444 11455. (Pubitemid 38401644)
12. Nery FC, Bressan GC, Alborghetti MR, Passos DO, Kuniyoshi TM, Ramos CHI, Oyama S Jr. Kobarg J (2006) A spectroscopic analysis of the interaction between human regulatory proteins RACK1 and Ki-1/57. Biol. Chem. 387, 577 582. (Pubitemid 44071460)
13. Passos DO, Bressan GC, Nery FC Kobarg J (2006) Ki-1/57 interacts with PRMT1 and is a substrate for arginine methylation. FEBS J. 273, 3946 3961. (Pubitemid 44253650)
14. Tang J, Frankel A, Cook RJ, Sangduk K, Paik WK, Williams KR, Clarke S Herschmann HR (2000) PRMT1 is the predominant type I protein arginine methyltransferase in mammalian cells. J Biol Chem 275, 7723 7730. (Pubitemid 30159676)
15. McBride AE Silver PA (2001) State of the arg: protein methylation at arginine comes of age. Cell 106, 5 8. (Pubitemid 32709951)
16. Kiledjian M Dreyfuss G (1992) Primary structure and binding activity of the hnRNP U protein: binding RNA through RGG box. EMBO J 11, 2655 2664.
17. Burd CG Dreyfuss G (1994) Conserved structures and diversity of functions of RNA-binding proteins. Science 265, 615 621. (Pubitemid 24268271)
18. Mourelatos Z, Abel L, Yong J, Kataoka N Dreyfuss G (2001) SMN interacts with a novel family of hnRNP and spliceosomal proteins. EMBO J 20, 5443 5452. (Pubitemid 32959464)
19. Passos DO, Quaresma AJC Kobarg J (2006) The methylation of the C-terminal region of hnRNPQ (NSAP1) is important for its nuclear localization. Biochem Biophys Res Commun 346, 517 525. (Pubitemid 43902714)
20. Petersen-Mahrt SK, Estmer C, Öhrmalm C, Matthews DA, Russell WC Akusjärvi G (1999) The splicing factor-associated protein, p32, regulates RNA splicing by inhibiting ASF/SF2 RNA binding and phosphorylation. EMBO J 18, 1014 1024. (Pubitemid 29082280)
21. Raffetseder U, Frye B, Rauen T, Jürchott K, Royer HD, Jansen PL Mertens PR (2003) Splicing factor SRp30c interaction with Y-box protein-1 confers nuclear YB-1 shuttling and alternative splice site selection. J Biol Chem 278, 18241 18248. (Pubitemid 36799442)
22. Stephens C Harlow E (1987) Differential splicing yields novel adenovirus 5 E1A mRNAs that encode 30 kd and 35 kd proteins. EMBO J 6, 2027 2035.
23. Caceres JF, Stamm S, Helfman DM Krainer AR (1994) Regulation of alternative splicing in vivo by overexpression of antagonistic splicing factors. Science 265, 1706 1709. (Pubitemid 24314901)
24. Himmelspach M, Cavaloc Y, Chebli K, Stévenin J Gattoni R (1995) Titration of serine/arginine (SR) splicing factors during adenoviral infection modulates E1A pre-mRNA alternative splicing. RNA 1, 794 806.
25. Handwerger KE Gall JG (2006) Subnuclear organelles: new insights into form and function. Trends Cell Biol 16, 19 26. (Pubitemid 43077091)
26. Lamond AI Spector DL (2003) Nuclear speckles: a model for nuclear organelles. Nat Rev Mol Cell Biol 4, 605 612. (Pubitemid 36934962)
27. Manfiolli AO, Maragno AL, Baqui MM, Yokoo S, Teixeira FR, Oliveira EB Gomes MD (2008) FBXO25-associated nuclear domains: a novel subnuclear structure. Mol Biol Cell 19, 1848 1861.
28. Hebert MD, Szymczyk PW, Shpargel KB Matera AG (2001) Coilin forms the bridge between Cajal bodies and SMN, the spinal muscular atrophy protein. Genes Dev 15, 2720 2729. (Pubitemid 32988881)
29. Paushkin S, Gubitz AK, Massenet S Dreyfuss G (2002) The SMN complex, an assemblyosome of ribonucleoproteins. Curr Opin Cell Biol 14, 305 312. (Pubitemid 34626968)
30. Gubitz AK, Feng W Dreyfuss G (2004) The SMN complex. Exp Cell Res 296, 51 56. (Pubitemid 38543212)
31. Young PJ, Le TT, Dunckley M, Nguyen TM, Burghes AH Morris GE (2001) Nuclear gems and Cajal (coiled) bodies in fetal tissues: nucleolar distribution of the spinal muscular atrophy protein, SMN. Exp Cell Res 265, 252 261. (Pubitemid 32980213)
32. Kornblihtt AR, de la Mata M, Fededa JP, Munoz MJ Nogues G (2004) Multiple links between transcription and splicing. RNA 10, 1489 1498. (Pubitemid 39288183)
33. Zimber A, Nguyen QD Gespach C (2004) Nuclear bodies and compartments: functional roles and cellular signalling in health and disease. Cell Signal 16, 1085 1104. (Pubitemid 38900512)
34. Lamond AI Earnshaw WC (1998) Structure and function in the nucleus. Science 280, 547 553. (Pubitemid 28227750)
35. Gonsalvez GB, Tian L, Ospina JK, Boisvert FM, Lamond AI Matera AG (2007) Two distinct arginine methyltransferases are required for biogenesis of Sm-class ribonucleoproteins. J Cell Biol 178, 733 740. (Pubitemid 47347358)
36. Cheng D, Côté J, Shaaban S Bedford MT (2007) The arginine methyltransferase CARM1 regulates the coupling of transcription and mRNA processing. Mol Cell 25, 71 83. (Pubitemid 46049059)
37. Boisvert FM, Hendzel MJ, Masson JY Richard S (2005) Methylation of MRE11 regulates its nuclear compartmentalization. Cell Cycle 4, 981 989. (Pubitemid 41359766)
38. Boisvert FM, van Koningsbruggen S, Navascués J Lamond AI (2007) The multifunctional nucleolus. Nat Rev Mol Cell Biol 8, 574 585. (Pubitemid 46985376)
39. Gerbi SA, Borovjagin AV Lange TS (2003) The nucleolus: a site of ribonucleoprotein maturation. Curr Opin Cell Biol 15, 318 325. (Pubitemid 36638650)
40. Gerbi SA Lange TS (2002) All small nuclear RNAs (snRNAs) of the (U4/U6.U5) tri-snRNP localize to nucleoli: identification of the nucleolar localization element of U6 snRNA. Mol Biol Cell 13, 3123 3137. (Pubitemid 35034250)
41. Quaresma AJC, Bressan GC, Gava LM, Lanza DCF, Ramos CHI Kobarg J (2009) Human hnRNP Q re-localizes to cytoplasmic granules upon PMA, thapsigargin, arsenite and heat-shock treatments. Exp Cell Res 315, 968 980.
42. Moraes KCM, Quaresma AJC, Maehnss K Kobarg J (2003) Identification and characterization of proteins that selectively interact with isoforms of the mRNA binding protein AUF1 (hnRNP D). Biol. Chem. 384, 25 37. (Pubitemid 36322629)
43. De Leeuw F, Zhang T, Wauquier C, Huez G, Kruys V Gueydan C (2007) The cold-inducible RNA-binding protein migrates from the nucleus to cytoplasmic stress granules by a methylation-dependent mechanism and acts as a translational repressor. Exp Cell Res 313, 4130 4144. (Pubitemid 350089966)
44. Lanza DC, Trindade DM, Assmann EM Kobarg J (2008) Over-expression of GFP-FEZ1 causes generation of multi-lobulated nuclei mediated by microtubules in HEK293 cells. Exp Cell Res 314, 2028 2039.
45. Kobarg J, Schnittger S, Fonatsch C, Lemke H, Bowen MA, Buck F Hansen HP (1997) Characterization, mapping and partial cDNA sequence of the 57 kDa intracellular Ki-1 antigen. Exp Clin Immunogenet 14, 273 280. (Pubitemid 28075794)
46. Rui E, de Moura PR Kobarg J (2001) Expression of deletion mutants of the hepatitis B virus protein HBx in E. coli and characterization of their RNA binding activities. Virus Res 74, 59 73. (Pubitemid 32168194)
47. Zerler B, Moran B, Maruyama K, Moomaw J, Grodzicker T Ruley HE (1986) Adenovirus E1A coding sequences that enable ras and pmt oncogenes to transform cultured primary cells. Mol Cell Biol 6, 887 899. (Pubitemid 16135953)
48. Yanagida M, Hayano T, Yamauchi Y, Shinkawa T, Natsume T, Isobe T Takahashi N (2004) Human fibrillarin forms a sub-complex with splicing factor 2-associated p32, protein arginine methyltransferases, and tubulins alpha 3 and beta 1 that is independent of its association with preribosomal ribonucleoprotein complexes. J Biol Chem 279, 1607 1614. (Pubitemid 38084425)