Molecular phylogenetic investigations of the Viviparidae (Gastropoda: Caenogastropoda) in the lakes of the Rift Valley area of Africa

Molecular Phylogenetics and Evolution

Volumn 52, Issue 3, 2009, Pages 797-805

  Sengupta, Mita E ^a   Kristensen, Thomas K ^a   Madsen, Henry ^a   Jørgensen, Aslak ^a  

^a DANISH BILHARZIASIS LABORATORY   (Denmark)

Author keywords

16S; 18S; 28S; Africa; Bellamya; COI; H3; Neothauma; Phylogeny; Viviparidae

Indexed keywords

FRESH WATER; MITOCHONDRIAL DNA;

AFRICA; ANIMAL; ARTICLE; CELL NUCLEUS; CLASSIFICATION; DNA SEQUENCE; GASTROPOD; GENETIC VARIABILITY; GENETICS; MOLECULAR EVOLUTION; PHYLOGENY; SEQUENCE ALIGNMENT;

AFRICA; ANIMALS; CELL NUCLEUS; DNA, MITOCHONDRIAL; EVOLUTION, MOLECULAR; FRESH WATER; GASTROPODA; GENETIC VARIATION; PHYLOGENY; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA;

BELLAMYA; BELLAMYA CAPILLATA; BELLAMYA UNICOLOR; CAENOGASTROPODA; GASTROPODA; NEOTHAUMA; VIVIPARIDAE;

EID: 67649982901     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2009.05.007     Document Type: Article

References (38)

1. Beadle L.C. The Inland Water of Tropical Africa. An Introduction to Tropical Limnology (1974), Longman, London
2. Bouchet P., and Rocroi J. Classification and nomenclator of gastropod families. Malacologia 47 1-2 (2005) 1-397
3. Brown D.S. Freshwater Snails of Africa and their Medical Importance. second ed. (1994), Taylor & Francis, London
4. Brown J.H., and Gibson A.C. Biogeography (1983), Mosby, London
5. Bremer K. The limits of amino-acid sequence data in angiosperm phylogenetic reconstruction. Evolution 42 (1988) 795-803
6. Colgan D., McLauchlan A., Wilson G.D.F., Livingston S.P., Edgecombe G.D., Macaranas J., Cassis G., and Gray M.R. Histone H3 and U2 snRNA DNA sequences and arthropod molecular evolution. Aust. J. Zool. 46 (1998) 419-437
7. De Groeve, E., 2005. The Late Cenozoic freshwater mollusks from the Tugen Hills (Kenya): taxonomy, palaeoecology and palaeozoogeography. M.A. Dissertation. Ghent University, Ghent, Belgium.
8. Folmer O., Black M., Hoeh W., Lutz R.A., and Vrijenhoek R.C. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol. Mar. Biol. Biotech. 3 (1994) 294-299
9. Franke, H., Riedel, F., Glaubrecht, M., Köhler, F., von Rintelen, T., 2007. Evolution and biogeography of Southeast Asian viviparids (Gastropoda: Caenogastropoda). In: Jordaens, K., Van Houtte, N., Van Goethem, J., Backeljau, T. (Eds.), Book of Abstracts. World Congress of Malacology, Antwerp, Belgium, 15-20 July 2007.
10. Glaubrecht M. Adaptive radiation of thalassoid gastropods in Lake Tanganyika, East Africa: morphology and systematization of a paludomid species flock in an ancient lake. Zoosyst. Evol. 84 1 (2008) 71-122
11. Glaubrecht M., and von Rintelen T. The species flocks of lacustrine gastropods: Tylomelania on Sulawesi as models in speciation and adaptive radiation. Hydrobiologia 615 (2008) 181-199
12. Hebert P.D.N., Ratnasingham S., and deWaard J.R. Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proc. R. Soc. Lond. B 270 Suppl. (2003) S96-S99
13. Huelsenbeck J.P., and Ronquist F. MrBayes: Bayesian inference of phylogeny. Biometrics 17 (2001) 754-755
14. Johnson T.C., Scholz C.A., Talbot M.R., Kelts K., Ricketts R.D., Ngobi G., Beuning K., Ssemmanda I., and McGill J.W. Late Pleistocene desiccation of Lake Victoria and rapid evolution of cichlid fishes. Science 273 (1996) 1091-1093
15. Jørgensen A., Kristensen T.K., and Madsen H. A molecular phylogeny of apple snails (Gastropoda, Caenogastropoda, Ampullariidae) with an emphasis on African species. Zool. Scr. 37 (2008) 245-252
16. Kat P.W. Biogeography and evolution of African freshwater molluscs: implications of a Miocene assemblage from Rusinga Island, Kenya. Palaeontology 30 4 (1987) 733-742
17. Kumar S., Tamura K., and Nei M. MEGA 3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinform. 5 (2004) 150-163
18. Mandahl-Barth G. The freshwater mollusks of Uganda and adjacent territories. Ann. Mus. Congo Belge Tervuren (Ser. 8) Sci. Zool. 32 (1954) 1-206
19. Mandahl-Barth G. Freshwater mollusks. Expl. Hydrobiol. Bangweulu-Luapula 12 (1968) 1-68
20. Mandahl-Barth G. The freshwater Mollusca of Lake Malawi. Rev. Zool. Bot. Afr. 86 (1972) 257-286
21. Meier R., Kwong S., Vaidya G., and Ng P.K.L. DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success. Syst. Biol. 55 (2006) 715-728
22. Mollaret I., Jamieson B.G.M., Adlard R.D., Hugall A., Lecointre G., Chombard C., and Justine J.L. Phylogenetic analysis of the Monogenea and their relationships with Digenea and Eucestoda inferred from 28S rDNA sequences. Mol. Biochem. Parasitol. 90 (1997) 433-438
23. Morgan J.A.T., Dejong R.J., Jung Y., Khallaayoune K., Kock S., Mkoli G.M., and Loker E.S. A phylogeny of planorbid snails, implications for the evolution of Schistosoma parasites. Mol. Phylogenet. Evol. 25 (2002) 477-488
24. Nylander J.A.A. MRMODELTEST v2. Program distributed by the author (2004), Evolutionary Biology Centre, Uppsala University
25. Ogutu-Ohwayo R., and Balirwa J.S. Management challenges of freshwater fisheries in Africa. Lakes Reserv. Res. Manage. 11 (2006) 215-226
26. Palumbi S.R., Martin A., Romano S., Mcmillan W.O., Stice L., and Grabowski G. The Simple Fools Guide to PCR (1991), Honolulu: University of Hawaii Press
27. Posada D., and Crandall K.A. Modeltest: testing the model of DNA substitution. Bioinformatics 14 (1998) 817-818
28. Rozas J., and Rozas R. DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15 (1999) 147-175
29. Schulmeister S., Wheeler W.C., and Carpenter J.M. Simultaneous analysis of the basal lineages of Hymenoptera (Insecta) using sensitivity analysis. Cladistics 18 (2002) 455-484
30. Schwendinger P.J., and Giribet G. The systematics of the south-east Asian genus Fangensis Rambla (Opiliones: Cyphophthalmi: Stylocellidae). Invert. Biol. 19 (2005) 297-323
31. Staden R. The Staden sequence analysis package. Mol. Biotechnol. 5 (1996) 233-241
32. Stothard J.R., Bremond P., Andriamaro L., Loxton N.J., Sellin B., Sellin E., and Rollinson D. Molecular characterization of the freshwater snail Lymnea nalatensis (Gastropoda: Lymnaeidae) on Madagascar with observation of an unusual polymorphism in ribosomal small subunit genes. J. Zool. (Lond.) 252 (2000) 303-315
33. Stothard J.R., and Rollinson D. Partial DNA sequences from the mitochondrial cytochrome oxidase subunit I (COI) gene can differentiate the intermediate snail hosts Bulinus globosus and B. nasutus (Gastropoda: Planorbidae). J. Nat. Hist. 31 (1997) 727-737
34. *and Other Methods). Version 4. Sinauer Associates, Sunderland, Massachusetts.
35. Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., and Higgins D.G. The CLUSTALX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25 (1997) 4876-4882
36. Van Damme D., and Pickford M. The late Cenozoic Ampullariidae (Mollusca, Gastropoda) of the Albertine Rift Valley (Uganda-Zaire). Hydrobiologia 316 (1995) 1-32
37. Van Damme D., and Pickford M. The late Cenozoic Viviparidae (Mollusca, Gastropoda) of the Albertine Rift Valley (Uganda-Congo). Hydrobiologia 390 (1999) 171-217
38. Van Damme, D., Van Bocxlaer, B., 2009. Freshwater molluscs of the Nile Basin, past and present. In: Dumont, H.J. (Ed.). The Nile: Origin, Environment, Limnology and Human Use. Monographiae Biologicae. Springer-Verlag, Dordrecht.